| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300121
Identifier: 146300121
GI number: 146300121
Start: 2836058
End: 2836954
Strand: Reverse
Name: 146300121
Synonym: Fjoh_2366
Alternate gene names: NA
Gene position: 2836954-2836058 (Counterclockwise)
Preceding gene: 146300122
Following gene: 146300120
Centisome position: 46.53
GC content: 32.44
Gene sequence:
>897_bases ATGTCACAAAACAACGTATTAAAAGGGGTAATTTTAGTTGCTTTAGGAGCTACAACTTACGGAATGTTAGCTACTTTCGT AAAAATGGCTTATTCAGAAGGATATACTACAGCAGAGGTAACAACATCTCAATTTATACTTGGAATTATCGGCGTTTTGA TTATTAATACCTTTCAAAAATTAAAAAATAAAGATAAAGTAGTAAAAGCTACTCCAAAAAATATTTTCAGTTTAATGCTT GCCGGAACATCGTTAGGAATGACGAGTTTGTTTTATTATCTGGCAGTAAAATTTATTCCGGTTTCTATTGGAATCGTTTT ATTAATGCAGACTGTTTGGATGGGAGTTTTACTGGAAATGATTTTAGAAAAAAAATTACCTTCAAAGCAAAAAGTGATTG CTGTTTTTATAGTTCTTTTTGGAACTGTTTTAGCTACAAATATTCTTAAAAATGATATCGCGCTTGACTGGAGAGGAATT GTCTGGGGTGTTTTAGCTGCAGCTTCTTTTACAACAACAATGTTTACTGCCAATCGTGTAGCAACCGAAATTTCACCAGC ACAAAGAAGCTTATTTATGCTTTTAGGAGGTTCTATCATTGTATTTACATTTGGATTTATTACTCAGGTTACACCTTTCA ATCTGGCAATTTTCCTAAAATGGGGAATTATTTTGTCTTTGTTTGGAACTATAATTCCTCCAATCCTTATGAATTTAGGT TTCCCGTTAACCGGAATTGGATTAGGAAGTATTGTTTCGGCTCTGGAACTGCCGGTTTCTGTTATGATGGCATTTGTTCT TTTGAATGAAAAAGTAATTCTTACGCAATGGATCGGAATTATTCTGATCATTCTTGCAATCATTATCATGAATATAAATT TCAAACGTAAAATTTAA
Upstream 100 bases:
>100_bases CAGGCAGGCACAATGATAACGTTTGCGTATATTTTCTATTAATTCCTAAATAAAATAGCTTACCTTTGCCGGCTTGAATT TTTTAAAACAAACAATCAAA
Downstream 100 bases:
>100_bases GATTTTTTGCGCCTTATTAAAAAAAACTGCCTTGTAATGCAATAAGTGTTAATTTTTTTATAATTTCGTTATAAATAATT AACTATCATGAACTTACCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSQNNVLKGVILVALGATTYGMLATFVKMAYSEGYTTAEVTTSQFILGIIGVLIINTFQKLKNKDKVVKATPKNIFSLML AGTSLGMTSLFYYLAVKFIPVSIGIVLLMQTVWMGVLLEMILEKKLPSKQKVIAVFIVLFGTVLATNILKNDIALDWRGI VWGVLAAASFTTTMFTANRVATEISPAQRSLFMLLGGSIIVFTFGFITQVTPFNLAIFLKWGIILSLFGTIIPPILMNLG FPLTGIGLGSIVSALELPVSVMMAFVLLNEKVILTQWIGIILIILAIIIMNINFKRKI
Sequences:
>Translated_298_residues MSQNNVLKGVILVALGATTYGMLATFVKMAYSEGYTTAEVTTSQFILGIIGVLIINTFQKLKNKDKVVKATPKNIFSLML AGTSLGMTSLFYYLAVKFIPVSIGIVLLMQTVWMGVLLEMILEKKLPSKQKVIAVFIVLFGTVLATNILKNDIALDWRGI VWGVLAAASFTTTMFTANRVATEISPAQRSLFMLLGGSIIVFTFGFITQVTPFNLAIFLKWGIILSLFGTIIPPILMNLG FPLTGIGLGSIVSALELPVSVMMAFVLLNEKVILTQWIGIILIILAIIIMNINFKRKI >Mature_297_residues SQNNVLKGVILVALGATTYGMLATFVKMAYSEGYTTAEVTTSQFILGIIGVLIINTFQKLKNKDKVVKATPKNIFSLMLA GTSLGMTSLFYYLAVKFIPVSIGIVLLMQTVWMGVLLEMILEKKLPSKQKVIAVFIVLFGTVLATNILKNDIALDWRGIV WGVLAAASFTTTMFTANRVATEISPAQRSLFMLLGGSIIVFTFGFITQVTPFNLAIFLKWGIILSLFGTIIPPILMNLGF PLTGIGLGSIVSALELPVSVMMAFVLLNEKVILTQWIGIILIILAIIIMNINFKRKI
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32564; Mature: 32433
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQNNVLKGVILVALGATTYGMLATFVKMAYSEGYTTAEVTTSQFILGIIGVLIINTFQK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LKNKDKVVKATPKNIFSLMLAGTSLGMTSLFYYLAVKFIPVSIGIVLLMQTVWMGVLLEM HCCCCCEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILEKKLPSKQKVIAVFIVLFGTVLATNILKNDIALDWRGIVWGVLAAASFTTTMFTANRV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH ATEISPAQRSLFMLLGGSIIVFTFGFITQVTPFNLAIFLKWGIILSLFGTIIPPILMNLG HHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC FPLTGIGLGSIVSALELPVSVMMAFVLLNEKVILTQWIGIILIILAIIIMNINFKRKI CCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure SQNNVLKGVILVALGATTYGMLATFVKMAYSEGYTTAEVTTSQFILGIIGVLIINTFQK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LKNKDKVVKATPKNIFSLMLAGTSLGMTSLFYYLAVKFIPVSIGIVLLMQTVWMGVLLEM HCCCCCEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILEKKLPSKQKVIAVFIVLFGTVLATNILKNDIALDWRGIVWGVLAAASFTTTMFTANRV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH ATEISPAQRSLFMLLGGSIIVFTFGFITQVTPFNLAIFLKWGIILSLFGTIIPPILMNLG HHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC FPLTGIGLGSIVSALELPVSVMMAFVLLNEKVILTQWIGIILIILAIIIMNINFKRKI CCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA