| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yjbJ [C]
Identifier: 146300074
GI number: 146300074
Start: 2787069
End: 2787254
Strand: Reverse
Name: yjbJ [C]
Synonym: Fjoh_2319
Alternate gene names: 146300074
Gene position: 2787254-2787069 (Counterclockwise)
Preceding gene: 146300075
Following gene: 146300073
Centisome position: 45.72
GC content: 33.33
Gene sequence:
>186_bases ATGAATACTACAGAGATAAAAGGAAACTGGAATGAGTTAAAAGGAAAACTTAAGCAAAAATATGCTGAACTGACAGATGA TGATTTAATGTTTGCTGAAGGAAAAGAAGACGAAATGTACGGAAGACTTCAGCAAAAACTGGGAAAAACGAAAGAGGAAT TTCATCAGATTCTATCAGATTTGTAG
Upstream 100 bases:
>100_bases AATGTGAATTATGCAGCGTTAGTGAAAATTGATGTAAAACGTAATCAAAATACAAATTGCAATTTTACATTATTATTAAT AACAAACAAAAAACACGATC
Downstream 100 bases:
>100_bases TTCTTATGACTCAATCAGGGAAATACCGTCTAGTAACAAAATATTAGACGGTATTTTTTTGAAAAAATAAGTATTTTCTA TTCTGTTTAACATATATTTT
Product: CsbD family protein
Products: NA
Alternate protein names: CsbD-Like Protein; Csbd Family Protein; CsbD-Like
Number of amino acids: Translated: 61; Mature: 61
Protein sequence:
>61_residues MNTTEIKGNWNELKGKLKQKYAELTDDDLMFAEGKEDEMYGRLQQKLGKTKEEFHQILSDL
Sequences:
>Translated_61_residues MNTTEIKGNWNELKGKLKQKYAELTDDDLMFAEGKEDEMYGRLQQKLGKTKEEFHQILSDL >Mature_61_residues MNTTEIKGNWNELKGKLKQKYAELTDDDLMFAEGKEDEMYGRLQQKLGKTKEEFHQILSDL
Specific function: Unknown
COG id: COG3237
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 12620 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 60 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 440 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7179; Mature: 7179
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTTEIKGNWNELKGKLKQKYAELTDDDLMFAEGKEDEMYGRLQQKLGKTKEEFHQILSD CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHC L C >Mature Secondary Structure MNTTEIKGNWNELKGKLKQKYAELTDDDLMFAEGKEDEMYGRLQQKLGKTKEEFHQILSD CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA