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The map label for this gene is trbB [H]

Identifier: 146284627

GI number: 146284627

Start: 124207

End: 124809

Strand: Direct

Name: trbB [H]

Synonym: Ent638_4301

Alternate gene names: 146284627

Gene position: 124207-124809 (Clockwise)

Preceding gene: 146284626

Following gene: 146284628

Centisome position: 78.74

GC content: 58.54

Gene sequence:

>603_bases
ATGAAATGTAAAAACATTCTGACAGCACTCATGTGTCTTATCCCTGTGCTGGCCAGTGCCGGCGTTCGTGAGGAGCTGAT
GGCGCTGGAGTCCGCGAAAGCCAGCCCGGTGACAACCCTGAATCCCGCTGCCAGTCCGGTGGTTTTGCCTCCCAGCCTGA
TGCAGCTGCCGGACGGACGCCGGGCAAACATGAAGGACTACGCGGTCGTGCTGTTTATGCAGGCCCACTGCCAGTACAGC
GCGAAGTTCGATCCGCTGCTGAAGGGCTGGGCCGATGAGCACAATATCCGCGTTTACCCTTACACCCTGGACGGCGGCGG
CGACGGGTCTTATCCAAATCCGCTGGTTCCGCGCAAGACTGACCCGGCCTCACCGATTGCTGATGAGATAGTCACCTTCT
TTGGCAATGGTCTGCCGATTGCCACGCCGACGGCCTTTGTGGTGAATGTGAACACCCTCAAGGCCTATCCGCTGACGCAG
GGAATGATGGAAATCCCGACGCTTGAAAATCGCTGGGCCAGCCTGATTCAGGCGGATATGGATAACGTCGACCCCAACGC
TTTGCCGCCATTGCCTGCCAGTGCGCAGGTCACGCCTAAGTAA

Upstream 100 bases:

>100_bases
CTGAGCTATGCCCTCTGGGGCATTGCAGGTGCGATGGTCATGCGTGCCGGTTTTGTCGCTTTGCGGGAACGACGCACCAG
ACGCAGCGGGGTGACCGGTC

Downstream 100 bases:

>100_bases
TACAACCGGAATACAAAATGACTACAAATTCGTATGCGCTGTCGCGTACCGAGCGCGTGTGGCTGTTATTCAGCGTCACC
TTGCTTGTGTCCGCCGTCTT

Product: conjugal transfer protein TrbB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKCKNILTALMCLIPVLASAGVREELMALESAKASPVTTLNPAASPVVLPPSLMQLPDGRRANMKDYAVVLFMQAHCQYS
AKFDPLLKGWADEHNIRVYPYTLDGGGDGSYPNPLVPRKTDPASPIADEIVTFFGNGLPIATPTAFVVNVNTLKAYPLTQ
GMMEIPTLENRWASLIQADMDNVDPNALPPLPASAQVTPK

Sequences:

>Translated_200_residues
MKCKNILTALMCLIPVLASAGVREELMALESAKASPVTTLNPAASPVVLPPSLMQLPDGRRANMKDYAVVLFMQAHCQYS
AKFDPLLKGWADEHNIRVYPYTLDGGGDGSYPNPLVPRKTDPASPIADEIVTFFGNGLPIATPTAFVVNVNTLKAYPLTQ
GMMEIPTLENRWASLIQADMDNVDPNALPPLPASAQVTPK
>Mature_200_residues
MKCKNILTALMCLIPVLASAGVREELMALESAKASPVTTLNPAASPVVLPPSLMQLPDGRRANMKDYAVVLFMQAHCQYS
AKFDPLLKGWADEHNIRVYPYTLDGGGDGSYPNPLVPRKTDPASPIADEIVTFFGNGLPIATPTAFVVNVNTLKAYPLTQ
GMMEIPTLENRWASLIQADMDNVDPNALPPLPASAQVTPK

Specific function: Unknown. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014109
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21559; Mature: 21559

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCKNILTALMCLIPVLASAGVREELMALESAKASPVTTLNPAASPVVLPPSLMQLPDGR
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEECCCCCCEEECHHHHHCCCCC
RANMKDYAVVLFMQAHCQYSAKFDPLLKGWADEHNIRVYPYTLDGGGDGSYPNPLVPRKT
CCCCCHHHEEEEEEHHCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC
DPASPIADEIVTFFGNGLPIATPTAFVVNVNTLKAYPLTQGMMEIPTLENRWASLIQADM
CCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCEECCCCCCCHHHCCCHHHHHHHHHHHHH
DNVDPNALPPLPASAQVTPK
CCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKCKNILTALMCLIPVLASAGVREELMALESAKASPVTTLNPAASPVVLPPSLMQLPDGR
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEECCCCCCEEECHHHHHCCCCC
RANMKDYAVVLFMQAHCQYSAKFDPLLKGWADEHNIRVYPYTLDGGGDGSYPNPLVPRKT
CCCCCHHHEEEEEEHHCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC
DPASPIADEIVTFFGNGLPIATPTAFVVNVNTLKAYPLTQGMMEIPTLENRWASLIQADM
CCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCEECCCCCCCHHHCCCHHHHHHHHHHHHH
DNVDPNALPPLPASAQVTPK
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2536655; 7915817 [H]