Definition | Aeropyrum pernix K1, complete genome. |
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Accession | NC_000854 |
Length | 1,669,696 |
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The map label for this gene is rpoB
Identifier: 14601675
GI number:
Start: 1172360
End: 1175869
Strand: Reverse
Name: rpoB
Synonym: APE_1856
Alternate gene names: NA
Gene position: NA
Preceding gene: 14601676
Following gene: 118431618
Centisome position: NA
GC content: NA
Gene sequence:
>3510_bases GTGTCTAACAAGGGGGGAGGTCAGCGTAGCGGAGAAATAGGTGTGGACGAGCTTTGGACGGTGTATAAGTCGTTTATCAG GGAAACCGGCCTTGCTAGGCAGCATCTAGACTCTTTCAACAGGCTTGTTACGCAGGAGATACAGAAGATAATCGACAGTA TTAGGGAGGTCAGGCCGCAGTGGAGGATCTATGCGGGTAGAAGGAGGTATAGGCGTGGAAGGTTTGAGGAGCACGAGATT CATCTTCCCGACGTGAAGATTGTATTTGGGAAGGCTAGGTTTAAGGAGCCTATGGCAAGGGAGGTCATAGAGAGTTTCGA CAGGCGTGTCACACCCTTCGAGTGCCGTGTGAGGGGGATAACCTACTCTGCACCTCTGATGGTGGAGATGACTATAGTGC AGGATAACATGATAGAGAAGACACGTGAGGTTAAGATAGCCGACTTCCCGGTTATGGTGAAGAGCGTTCTAGACCCTCTA TCCAAGTACGATGAGGAAACTGTTATAGAGATGGGTGAGGACCCCGGAGATCCCGGCGGCTACTTCATAATAAACGGGAG CGAAAAAGTCATAGTTGCCCAGGAGGATCTAGCGGTAAACAGGATTATAGTTAACAAGAGCACAGCAGCTACCGCCAGAA TTACGCATACCGCTAAGGCAGTCTCAACAGTTCTAGGACTTAGGAGGCAAGCCATAGTGGATAGGATGAGCGACGGCACA CTCGAGGCCAGTCTAAGCAGGCTGAGGTATAGGATACCCCTTGTGGTTCTCCTAAGGGCCCTAGGGTTGGAAAAGGATAT GGAGATAATGCTTGCTGTCAGCGCTGATCCGGATGTGCAGAGGGAGATGTTACCCAGCCTTGAGAAGGGTAGGGCTCTCG CACCCACTAAAGAGGACGCCCTCAAATACCTGGGCAATAGGATAGCCCCGGGACAGCCGCTGGATGTTAGGATAAGAAGG GCAGAGGAGTTCCTGGACACGCAGCTGCTGCCCCACCTTGGCAACAGGCCTGAGGACAGGATAAAGAAGGCGTACTTCCT GGCTGAGATGGCTAACAGGGTTCTACAACTGTATCTAGGTAAGAGGGGCGAGGATGATAAAGACTTCCTCGGCAATAAGA GGCTGAGGCTGGCAGGCGATCTTATAGCAGAGCTATTCAGAGAATCCCTAGAGGCTCTGGCGAATACTATGGCCCAGAAG CTCGAGGAGCAGCTGGCCGAGAGGAGGCAAATAAGGCTGGACTTCCTCGTCAGACCAACCATAATAAGTGACAGGCTCAA GGGCGCCATAGCCACTGGCAACTGGGGTCAGGACCGTACTGGTATAAGCCAGCAGTTGGATAGGACAAACTGGATAAGCC TGCTCAGCCATCTTAGGAGGGTTATATCGCCTCTAAGCAGAGGTCAGGCCCACTTCGAGGCGAGAGACCTCCACGGCTCC CACTGGGGGCGCTACTGCCCCTTCGAGACTCCTGAGGGCATAAACTGTGGTCTTGTGAAGAACCTTGCACTTTCAGCCTA CATATCTGTCGGTGTGGATGAGTCTGTTGTTGAGGAGATCCTCGTTAAGGACCTGGGAGTGGCGCCTCTAGAGAGAATCC TGGAAGAGGCGAAACAGGCGGGCGAGCCGCCGGAGATAATGTTGAAGGGTACCAAGGTTTTCATAAATGGGAGGCCTCTC GGCTATCACCCTAACGGTGCTGAGCTTGCGAGGAAGATTAGGGAGCTTAGGAGGAGTGACAAGCTCGAGGTTGAGAGGCC TTGGGAGGTTAGCGTATATCACCTGAGAGAGGGCGAGATAGACGAGCTTTACGTAAACACCGACTCCGGCAGGCTCATGA GGCCTGTTGTAGTGGTTGAGAACGGGGAGCCTAAGCTTACCAGGGAACATGTGGAGAAGCTGTCGAGAGGCGAAATAACG TTCTGGGATCTCGTTAAACAGGGAGTAGTGGAGATGCTGGACCCCGAGGAGGAGCAGAACGCGTTAATAGCTGAGCTGCC CTGGGAGGTCACTAAGGAGCATACCCACATGGAGCTATGGGTGCCAGCGATAGTTGGTGTCGCTGCAGCCACCATTGGGT ACCTGGAGCACAACCAGAGCCCGAGGAACACCTACCAGGCTGCTATGGCTAAGCAGGCCCTCGGTGTCTACGCTCTAAAC TATAGGATAAGGCTTGACAGCCACTCATACCTGCTTCAGTACCCGCAGGTACCTATAGTCCAGACTAGGATGCTGGACAT AATGGGCTATAACGAGAGGCCGGCCGGGCAGAATATGGTAGTCGCTATAATGTCATACACGGGATACAACATTGAGGACG CGCTGATATTCAACAAGGGATCGATAGACATGGGACTGGCGAGGGCCTACTTCTTCCGTGTATACACTGGAATAGAGAAT GAGTATCCCGGCGGCGAGAGAGACAGGATAACCCTGCCGAAGCCTGACGAGGTTTACGACTATAGGGGTGCAGCGGCATA CGCGAAGCTAGAGGCCGATGGAATAGTAGCCCCCGAAACCGAGGTTGAGGGCGGCGAGATCCTGATAGGCAGGGTAAGCC CGCCCAGGTTCCTCGGCGAAGGCAGGGTTATATCGATGGCTACCGTTAGGAGGCGTGACACAAGCATACCGATGAGGCTG GGTGAGAAGGGGGTTGTTGATATGGTTGTCATATCCACAACAGTCGAGAGGAATAAGCTAGTGAAGGTCAGGGTTAGAAA CCTGAGGATACCAGAGATAGGGGACAAGTTCGCCAGCAGGCACGGGCAGAAGGGGGTTATAGGCATGATATTCCCGAGGT ATGACATGCCATACACGGAGGAGGGTATAGAGCCCGACGTTATACTTAACCCGCACGCCATACCCTCTAGGATGACTGTC GGCCAGCTTCTAGAGGAGATCGCTGGAAAGCTCGGAGCTATTAAGGGCAGATTCGTGGATGCCACCCCCTTCTTTAAGGA GGATATAGATGGACTGAGGATAGAGCTGTTGAAGGAGGGCTACGATCCGAACGCGAGGGAGGTTATGTACGACGGTAGGA CAGGGCAGATTATAGAGGCACCGATAACAATCGGTGTCGCATACTATCAGAGACTTTATCACATGGTTGCAGACAAGATC CACGCAAGGGCTACTGGAAGGGTGCATCTATTGACTAGGCAGCCTACCGAGGGTAAGGCCCGTCAGGGAGGCCTCAGGTT CGGAGAGATGGAGAGGGACTGTTTGGTGGGCCATGGAGCCTCCATGCTGCTTAGGGACAGGATGCTGGACAACAGCGACG CGTACGTGATGTACGTGTGTAACACTTGTGGGAATATAGCGTGGTTTAACAGGAGGAAGAAAGTGCTCGAATGCCCCATA CATGGAGAGGAGGGTGACATCAGGCCTGTCAAAGTACCCTACGCGTTCAAACTGCTGCTGCAGGAGATAACCAGTATGAT GATAAAGCCGGAACTCAAGGTAGCCGACAAGATATCCGTCATCAGAAAAGTCGTCGGCGACTATACATGA
Upstream 100 bases:
>100_bases AAGCCGGGGGATATTATCGAGATAACTAGGCGCAGCTACACGGCTGGCGAGGCGAAGTACTATAGGTTTGTAGTGGCCTA CCAGAAGGGGGTGAAGTAGT
Downstream 100 bases:
>100_bases TTACCCCATTTTAATTCTCGGATTTCGGGGGTGTTGGGTGCTATGTCTCTAAGGCTCTCGGAGTTCCGCGAGACAAACCT TCTAGATAAGATACTCTTTG
Product: DNA-directed RNA polymerase subunit B
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1169_residues MSNKGGGQRSGEIGVDELWTVYKSFIRETGLARQHLDSFNRLVTQEIQKIIDSIREVRPQWRIYAGRRRYRRGRFEEHEI HLPDVKIVFGKARFKEPMAREVIESFDRRVTPFECRVRGITYSAPLMVEMTIVQDNMIEKTREVKIADFPVMVKSVLDPL SKYDEETVIEMGEDPGDPGGYFIINGSEKVIVAQEDLAVNRIIVNKSTAATARITHTAKAVSTVLGLRRQAIVDRMSDGT LEASLSRLRYRIPLVVLLRALGLEKDMEIMLAVSADPDVQREMLPSLEKGRALAPTKEDALKYLGNRIAPGQPLDVRIRR AEEFLDTQLLPHLGNRPEDRIKKAYFLAEMANRVLQLYLGKRGEDDKDFLGNKRLRLAGDLIAELFRESLEALANTMAQK LEEQLAERRQIRLDFLVRPTIISDRLKGAIATGNWGQDRTGISQQLDRTNWISLLSHLRRVISPLSRGQAHFEARDLHGS HWGRYCPFETPEGINCGLVKNLALSAYISVGVDESVVEEILVKDLGVAPLERILEEAKQAGEPPEIMLKGTKVFINGRPL GYHPNGAELARKIRELRRSDKLEVERPWEVSVYHLREGEIDELYVNTDSGRLMRPVVVVENGEPKLTREHVEKLSRGEIT FWDLVKQGVVEMLDPEEEQNALIAELPWEVTKEHTHMELWVPAIVGVAAATIGYLEHNQSPRNTYQAAMAKQALGVYALN YRIRLDSHSYLLQYPQVPIVQTRMLDIMGYNERPAGQNMVVAIMSYTGYNIEDALIFNKGSIDMGLARAYFFRVYTGIEN EYPGGERDRITLPKPDEVYDYRGAAAYAKLEADGIVAPETEVEGGEILIGRVSPPRFLGEGRVISMATVRRRDTSIPMRL GEKGVVDMVVISTTVERNKLVKVRVRNLRIPEIGDKFASRHGQKGVIGMIFPRYDMPYTEEGIEPDVILNPHAIPSRMTV GQLLEEIAGKLGAIKGRFVDATPFFKEDIDGLRIELLKEGYDPNAREVMYDGRTGQIIEAPITIGVAYYQRLYHMVADKI HARATGRVHLLTRQPTEGKARQGGLRFGEMERDCLVGHGASMLLRDRMLDNSDAYVMYVCNTCGNIAWFNRRKKVLECPI HGEEGDIRPVKVPYAFKLLLQEITSMMIKPELKVADKISVIRKVVGDYT
Sequences:
NA
Specific function: NA
COG id: COG0085
COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA