Definition | Aeropyrum pernix K1, complete genome. |
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Accession | NC_000854 |
Length | 1,669,696 |
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The map label for this gene is soxC
Identifier: 14601587
GI number:
Start: 1090850
End: 1092565
Strand: Direct
Name: soxC
Synonym: APE_1725
Alternate gene names: NA
Gene position: NA
Preceding gene: 118431568
Following gene: 118431569
Centisome position: NA
GC content: NA
Gene sequence:
>1716_bases GTGGCTGCTAGGATGTTTGTGAGGAAGGCTTGGGAGTGGATTTACGAGAGGGGCGGTCTAGGCCACCTGCCTTTCTATAG AGTCCCATATAGCTATTTCACGCTCGACATATGGCTGGGAGCTATAGTAGCCTCCAGCTTCTTCTGGCTCGCCCTGACCG GTCTATTGCTACTGTTTTACTATAGGCCTACAGACCCTCTCGAGTCGAGCAAGGCTATAATATTCGAGAGGCCCTTCGGC GCACTCCTGCTCACCAGCCACCTCTACGCAGCCCACTTCATGCTCATAGGCGTTTTCGCACACGCTTTCAGGAACCTATT CAAGGGCGTCTACAAAAGGCCTAGGGAGCTGGTGTGGATAGTTGGAGTGGCCACAGGATTCCTAGCCCTTCAGACAGCAT TCTTCGGCTACAGCCTCGTTGGAGACAGGATTGCGAAGGAGGCCATAAACATAGGGTCGGCTCTGAACCTCAGGAGCCTT GGAGAGGAGCTGGGGCTATATGTCGTTGCAATACTTTTCGGCCTAGACCCCACCGAGAGGTACTTCAGAATCACCGCACT ACACGTGCTACTCGCAGCCACGGTATTCCTACTCTTCCTACTCCACTTCGGCCTCTTCGAGGTTCACGGGCCAGCGCCTA AGGAGGAGGAGACTGGGTGGAAGGCGGAGCCGGCGAGGATACCCCAGGATAGGAGTGACCTTGCCCCATGGTTCCCGGTA AACCTGGTGTTCATACTGGCTGTCACCCTGATGACATGGGGGTTCATAGTCTTCACGGCTGGCATGGCGCAGAGGTTTGC AGACCTCCTGCCACCCCTGTTTAAGCCATACCCTGTTGAGGCGGAGGACTTCACGCCAATGCCCCCGTGGTTCTTCCTCT ACACCTACAGGATATTCCAGATGACCTTCCTAACGCTCAGCCTGGAAAGCACTCCCCAGCTGCTCCAGTTCATAATAGCG CTGGTACTCCCGCCGTTGATACTAATGATTATACCCTTTGTGGACAGGAAGGTTTCCACTAACCCCGTCGACAGGCCCTG GATAACCGGGCTTGGCATAATTCTGCTCACCGGCTACATGCAGCTCACAGTATGGTCCATGATAGAGCCCGGTATACCTA TAAGACTAGTGCAGCTGCTCACTGTAGCGAGCCCCCCGCTAGCAGCGACAATAGTAGGCTTATACCTGCTCAGAAAGGTT AGAAGAGGTGAAGCAATAACGCCTGGAGACTTTCTCTCCTCCTCAGGCCTGCTAGTAGCGGGTACAGCCCTCCCACCACT CCTGGGCATGGCCCTTGGCGTGCCGGAGCTACACCAGGAGGTTGCCGTGGGCTTCATGGGCCTGGCGTTCGCCACCGTCA TACTAGGCTGGATAGCGGCGAAGCTCAGGGTGGAGCCTGAATCCGAGCTGGAGCCAGTGCAAGACCCAGATTCCTCGATA CCATGGTACCTGCTGCTAGTAGCTCTGGGCGAAGTCGGTATAGCTTCGTTCTCCCTAATAGCCCTGGCAGCTATAGCCTT CATAGACCCTGTAGGTTATGCAATGCAGGCAACTGTCCTGACAGGGCTTCTCCTGCTGTCGGGAGGAGCGCTGGCCCACG CGCTCTTCAGGGCACTGGCAGCAGAATGGATACCCCGCGGAAATGTTGTTGACGAGCTGAAAGTCCACTTCCTACCCTAC CTAGCTCTAGCTCTAGCTGTAATCTTCGTTCTTTGA
Upstream 100 bases:
>100_bases CTGCAACACATGCGGAAAGCTCGTTGGCTCCACTGTTGTAGTGGGCGTAAACAAGGAGCCCAAGAAAGTTCAGTGTTGAC GGTGTAGGGGGTGTGGAGAC
Downstream 100 bases:
>100_bases CGCGGGGAGCTCCAAGCGTTTTCCCCTTTTTGACACGTTCACAATCGTATAGCCAGGCCACGGTGTCGGGGCCATCTTTT TCTCCCCTAACAATCTAATA
Product: cytochrome b
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>571_residues MAARMFVRKAWEWIYERGGLGHLPFYRVPYSYFTLDIWLGAIVASSFFWLALTGLLLLFYYRPTDPLESSKAIIFERPFG ALLLTSHLYAAHFMLIGVFAHAFRNLFKGVYKRPRELVWIVGVATGFLALQTAFFGYSLVGDRIAKEAINIGSALNLRSL GEELGLYVVAILFGLDPTERYFRITALHVLLAATVFLLFLLHFGLFEVHGPAPKEEETGWKAEPARIPQDRSDLAPWFPV NLVFILAVTLMTWGFIVFTAGMAQRFADLLPPLFKPYPVEAEDFTPMPPWFFLYTYRIFQMTFLTLSLESTPQLLQFIIA LVLPPLILMIIPFVDRKVSTNPVDRPWITGLGIILLTGYMQLTVWSMIEPGIPIRLVQLLTVASPPLAATIVGLYLLRKV RRGEAITPGDFLSSSGLLVAGTALPPLLGMALGVPELHQEVAVGFMGLAFATVILGWIAAKLRVEPESELEPVQDPDSSI PWYLLLVALGEVGIASFSLIALAAIAFIDPVGYAMQATVLTGLLLLSGGALAHALFRALAAEWIPRGNVVDELKVHFLPY LALALAVIFVL
Sequences:
NA
Specific function: NA
COG id: COG1290
COG function: function code C; Cytochrome b subunit of the bc complex
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA