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The map label for this gene is vagC [H]

Identifier: 145301519

GI number: 145301519

Start: 136927

End: 137157

Strand: Direct

Name: vagC [H]

Synonym: ASA_P5G143

Alternate gene names: 145301519

Gene position: 136927-137157 (Clockwise)

Preceding gene: 145301517

Following gene: 145301520

Centisome position: 88.28

GC content: 48.05

Gene sequence:

>231_bases
ATGCGTACTGTATCAATTTTTAAAAATGGTAAAAATCAGGCGGTGAGACTGCCAAAAGACATGGAGTTTCAGGGGGTTAA
TGACCTTGAGATTATCAAAAATGGCGACACAATCACGTTGCGCCCGGCCCGCCCTGATTGGTTTTCCCTGGCGGAATGCC
AGAAGGTGGATGCAGATTTCTTGCAAGAACGTACCGATGTGATCAGCGATGAAGGACGGTTCGCCCTGTGA

Upstream 100 bases:

>100_bases
TGATCAGGGCCGCATTTGAGGTCGCTTTATAGTGGCATATGCTTGACATATGCCACTGGTGGTTATAAATTGCATATGTC
AAACATATGCAGGAGGGTTT

Downstream 100 bases:

>100_bases
AGACGTTTATGCTCGATACCTGCATTTGTTCCTTCATCATGCGCGAAATGCCACAGTCAGTTCTTGAACGGTTGGGCGCA
GAGGTGGCGAGCGGCAATCG

Product: VagC protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MRTVSIFKNGKNQAVRLPKDMEFQGVNDLEIIKNGDTITLRPARPDWFSLAECQKVDADFLQERTDVISDEGRFAL

Sequences:

>Translated_76_residues
MRTVSIFKNGKNQAVRLPKDMEFQGVNDLEIIKNGDTITLRPARPDWFSLAECQKVDADFLQERTDVISDEGRFAL
>Mature_76_residues
MRTVSIFKNGKNQAVRLPKDMEFQGVNDLEIIKNGDTITLRPARPDWFSLAECQKVDADFLQERTDVISDEGRFAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the vapB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007159 [H]

Pfam domain/function: PF04014 SpoVT_AbrB [H]

EC number: NA

Molecular weight: Translated: 8700; Mature: 8700

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVSIFKNGKNQAVRLPKDMEFQGVNDLEIIKNGDTITLRPARPDWFSLAECQKVDADF
CCEEEEEECCCCCEEECCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCHHHHHCCCHHH
LQERTDVISDEGRFAL
HHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRTVSIFKNGKNQAVRLPKDMEFQGVNDLEIIKNGDTITLRPARPDWFSLAECQKVDADF
CCEEEEEECCCCCEEECCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCHHHHHCCCHHH
LQERTDVISDEGRFAL
HHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1495391 [H]