Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
---|---|
Accession | NC_009350 |
Length | 155,098 |
Click here to switch to the map view.
The map label for this gene is kfrA
Identifier: 145301492
GI number: 145301492
Start: 106733
End: 107737
Strand: Reverse
Name: kfrA
Synonym: ASA_P5G113
Alternate gene names: NA
Gene position: 107737-106733 (Counterclockwise)
Preceding gene: 145301493
Following gene: 145301491
Centisome position: 69.46
GC content: 62.99
Gene sequence:
>1005_bases ATGGCCGTGTCAGCCGAGGTCAAAGAACGCATCATCGCCGCCGCGAATGCCCTCTATGAGCGCAGCACCACTGGCGAGTG CCCGACCGTCGAAGCGGTGCGCCAGGAAAGCAGAGCTGCCATGAGTACGGTGGTTGAGGTGATGAAGGGCTGGCGCGAAA GCCAGCGCAAGCAAGTGCAGGTGGTGCGTGAGCCACTTCCGCTCCCGCTGCAGGAGCATGTTCGCGCATTGGGGCAGAGC TTCTGGGAGACGGCCCAGCTGCTGGCCAACGAGTCACTGGATGCTGCTCGCACCGGGTTTGAAGCCGAGAAAAGTGACCT GCTGCAGCTGTCAGCTGAGCAGTCTGCTGCGTTTGAGCTGCAGGCGATGGAGTTGGAAACGGCACAAGAGCAGATCGCCG CGCAGGCAGAACAACTGGCGCTCAATGCTGAGGCACTCAAGACCATGACCCAACAGCTGGACGCAATCCGCCAGCAGCTG CAGGCTGCCGAACAGGCGACGGCATTGGCCCAGCAGCGCTGCGAGGACACTGAGCTGCGGGCCGGTGAGCTACGGGCTGA GCTCGATCATGCCCATATGGAGGCTGAGCAGTCAGCGATCGCAGCGCAGCAGGTAGAAGATGCCTTGCGCAGTGATGCGG ATCGGTTGCGAACCGAACGAGATCGGACGCAACAGCGGCTGGAGCTGGCCGAGCGAGAGCAGGAAAAGCAGACCGTCCAG CTGGCCAACCGCGACGAAACTATCCAACAGCTGCGGGAACGTCTCGCTATAGCGACCGCCCAGGCCGAGGCCGCCGATCA GACCCATGTCGCAGAGCGCCAACGGATGATTGAGGAGGCGCAGAAACAGGCCGAGCGCCTCGATCGGATCGAAGCTGACT ATGAGGCTGCTCGTCATGATGCCGCCACCGCCCGCGAGGCGGCTGCTGCGCAACGAGGCGAGCTGGAGGCAACGCGGGGG CTGCTGGCAACGTTCACTACTCAGTCTGGACATGGCAAGCAGTAA
Upstream 100 bases:
>100_bases CCGGCACAGCCGATCGGTGGCTATCGGGTAGGAAACAACGTTAGTAGTAATAATAGTAGTGGTGTTACTATTATTACTAC TAACTCAAGAAGAGAACAAC
Downstream 100 bases:
>100_bases GGTTGGCGAAGATGGCCAGCGCTGGCAAATGATGAATGACAACGGTTGAGGCTGGCGCGACCAAAAACCCCGCCATGCAG GACTTTTGCTTTCTAAAAGC
Product: KfrA protein
Products: NA
Alternate protein names: Transcriptional Regulator
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MAVSAEVKERIIAAANALYERSTTGECPTVEAVRQESRAAMSTVVEVMKGWRESQRKQVQVVREPLPLPLQEHVRALGQS FWETAQLLANESLDAARTGFEAEKSDLLQLSAEQSAAFELQAMELETAQEQIAAQAEQLALNAEALKTMTQQLDAIRQQL QAAEQATALAQQRCEDTELRAGELRAELDHAHMEAEQSAIAAQQVEDALRSDADRLRTERDRTQQRLELAEREQEKQTVQ LANRDETIQQLRERLAIATAQAEAADQTHVAERQRMIEEAQKQAERLDRIEADYEAARHDAATAREAAAAQRGELEATRG LLATFTTQSGHGKQ
Sequences:
>Translated_334_residues MAVSAEVKERIIAAANALYERSTTGECPTVEAVRQESRAAMSTVVEVMKGWRESQRKQVQVVREPLPLPLQEHVRALGQS FWETAQLLANESLDAARTGFEAEKSDLLQLSAEQSAAFELQAMELETAQEQIAAQAEQLALNAEALKTMTQQLDAIRQQL QAAEQATALAQQRCEDTELRAGELRAELDHAHMEAEQSAIAAQQVEDALRSDADRLRTERDRTQQRLELAEREQEKQTVQ LANRDETIQQLRERLAIATAQAEAADQTHVAERQRMIEEAQKQAERLDRIEADYEAARHDAATAREAAAAQRGELEATRG LLATFTTQSGHGKQ >Mature_333_residues AVSAEVKERIIAAANALYERSTTGECPTVEAVRQESRAAMSTVVEVMKGWRESQRKQVQVVREPLPLPLQEHVRALGQSF WETAQLLANESLDAARTGFEAEKSDLLQLSAEQSAAFELQAMELETAQEQIAAQAEQLALNAEALKTMTQQLDAIRQQLQ AAEQATALAQQRCEDTELRAGELRAELDHAHMEAEQSAIAAQQVEDALRSDADRLRTERDRTQQRLELAEREQEKQTVQL ANRDETIQQLRERLAIATAQAEAADQTHVAERQRMIEEAQKQAERLDRIEADYEAARHDAATAREAAAAQRGELEATRGL LATFTTQSGHGKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37201; Mature: 37069
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSAEVKERIIAAANALYERSTTGECPTVEAVRQESRAAMSTVVEVMKGWRESQRKQVQ CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVREPLPLPLQEHVRALGQSFWETAQLLANESLDAARTGFEAEKSDLLQLSAEQSAAFEL HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH QAMELETAQEQIAAQAEQLALNAEALKTMTQQLDAIRQQLQAAEQATALAQQRCEDTELR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AGELRAELDHAHMEAEQSAIAAQQVEDALRSDADRLRTERDRTQQRLELAEREQEKQTVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LANRDETIQQLRERLAIATAQAEAADQTHVAERQRMIEEAQKQAERLDRIEADYEAARHD HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AATAREAAAAQRGELEATRGLLATFTTQSGHGKQ HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AVSAEVKERIIAAANALYERSTTGECPTVEAVRQESRAAMSTVVEVMKGWRESQRKQVQ CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVREPLPLPLQEHVRALGQSFWETAQLLANESLDAARTGFEAEKSDLLQLSAEQSAAFEL HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH QAMELETAQEQIAAQAEQLALNAEALKTMTQQLDAIRQQLQAAEQATALAQQRCEDTELR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AGELRAELDHAHMEAEQSAIAAQQVEDALRSDADRLRTERDRTQQRLELAEREQEKQTVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LANRDETIQQLRERLAIATAQAEAADQTHVAERQRMIEEAQKQAERLDRIEADYEAARHD HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AATAREAAAAQRGELEATRGLLATFTTQSGHGKQ HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA