Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
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Accession | NC_009350 |
Length | 155,098 |
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The map label for this gene is 145301485
Identifier: 145301485
GI number: 145301485
Start: 102292
End: 102786
Strand: Direct
Name: 145301485
Synonym: ASA_P5G106
Alternate gene names: NA
Gene position: 102292-102786 (Clockwise)
Preceding gene: 145301479
Following gene: 145301494
Centisome position: 65.95
GC content: 54.34
Gene sequence:
>495_bases ATGGCCCTTTCGTGTCCACTTGGTTTCGCTATGACGAGCAAAGACCACGGGGTCTTCGGCTCCCCGAACCAAAACGTTAC ACACCCCGCTGGGTTGGCTTGTTATGGCATGATCCCCGAGATTGTGTCTAAAGGTGAGTGGATCCCTGCTGGCGAGATCT TCTTGAGAGTCGGCAGACATACAGGCCCAAACAGAGGCTTTGGCGTTCGCCATATCTGGGCTGAACATGAGAAGGAATTG ACCAAGATGGGCTACCACACCATCAACGATGTGGCCCGCTATATCAGCGACATTATTCGGCCTGGAGCCAAGATATATTG TGAGTTCAACAGTGCGGCGGGCCGCCACCGTCCTACCGTCCTGAAATCCCCGCTCGGACTCGTTGTGCTTGAGCCCAGGG AAGCACCGGAAACCGCATCTGGCCACATCTATACGGTTGTTACCGCCTATACAAAACGCACCGCACATGACGTTCTGGTG GGAAACGTACAATGA
Upstream 100 bases:
>100_bases CATACCGGCTCGCCCTGGATAGCCGGTTTTCCCTGGTACTTTGGCCGTTGGCCAAGAAGACAAATGCCAGTCCCCCAAAC CGCAGTATCTGCGTGATATA
Downstream 100 bases:
>100_bases AAAAGGGCACACCGTAGTGTGCCCTTTATGAAAGGTTGGTAGCCGCAGCGTTTCCTTAGCTCATGGGTTCGGAAACCGAC TCGTTTGTCGAACTACCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MALSCPLGFAMTSKDHGVFGSPNQNVTHPAGLACYGMIPEIVSKGEWIPAGEIFLRVGRHTGPNRGFGVRHIWAEHEKEL TKMGYHTINDVARYISDIIRPGAKIYCEFNSAAGRHRPTVLKSPLGLVVLEPREAPETASGHIYTVVTAYTKRTAHDVLV GNVQ
Sequences:
>Translated_164_residues MALSCPLGFAMTSKDHGVFGSPNQNVTHPAGLACYGMIPEIVSKGEWIPAGEIFLRVGRHTGPNRGFGVRHIWAEHEKEL TKMGYHTINDVARYISDIIRPGAKIYCEFNSAAGRHRPTVLKSPLGLVVLEPREAPETASGHIYTVVTAYTKRTAHDVLV GNVQ >Mature_163_residues ALSCPLGFAMTSKDHGVFGSPNQNVTHPAGLACYGMIPEIVSKGEWIPAGEIFLRVGRHTGPNRGFGVRHIWAEHEKELT KMGYHTINDVARYISDIIRPGAKIYCEFNSAAGRHRPTVLKSPLGLVVLEPREAPETASGHIYTVVTAYTKRTAHDVLVG NVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17932; Mature: 17801
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSCPLGFAMTSKDHGVFGSPNQNVTHPAGLACYGMIPEIVSKGEWIPAGEIFLRVGRH CEECCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHEEECCC TGPNRGFGVRHIWAEHEKELTKMGYHTINDVARYISDIIRPGAKIYCEFNSAAGRHRPTV CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCE LKSPLGLVVLEPREAPETASGHIYTVVTAYTKRTAHDVLVGNVQ ECCCCCEEEECCCCCCCCCCCEEEEEEEEHHHHCCCCEEEECCC >Mature Secondary Structure ALSCPLGFAMTSKDHGVFGSPNQNVTHPAGLACYGMIPEIVSKGEWIPAGEIFLRVGRH EECCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHEEECCC TGPNRGFGVRHIWAEHEKELTKMGYHTINDVARYISDIIRPGAKIYCEFNSAAGRHRPTV CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCE LKSPLGLVVLEPREAPETASGHIYTVVTAYTKRTAHDVLVGNVQ ECCCCCEEEECCCCCCCCCCCEEEEEEEEHHHHCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA