Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
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Accession | NC_009350 |
Length | 155,098 |
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The map label for this gene is 145301480
Identifier: 145301480
GI number: 145301480
Start: 97248
End: 98291
Strand: Reverse
Name: 145301480
Synonym: ASA_P5G100
Alternate gene names: NA
Gene position: 98291-97248 (Counterclockwise)
Preceding gene: 145301481
Following gene: 145301477
Centisome position: 63.37
GC content: 51.92
Gene sequence:
>1044_bases ATGACGCAAGCGCAGATTTACATTTACGGGATCGATTTAGGCAAAAATTGGTTTCACCTGGTGGCGATGGATCGCATGGG GCATGTATTGACCAAGCAAAAGCTCACTCGTTCACAACTAAAATAGTTCATCAGTACGACCCCACCCTGTCGGGTCGCCT TCGAGGCATGTCCTGGTTCGCAATACTGGGGGCGCCTGTTTCAACAGGCGGGGTTCGAACCCAAGATTATCCCTGCCCAA TTTGTGAAGCCCTACCTCAAATCAAACAAGAATGACTTCAACGATGCTACCGCCATTGCCGAGGCTGGTAGCAGAGGCAC TATGCGCTGTGTCCCGTTGAAATCTCATGAACAGTTGGCATTGCAGGCGACTCATCGAGTCCGTCAACGTTTCATCATCG AACGTACCGCCACTGTCAATCAGATGCGAGCGTTGCTGCTGGAATATGGGCTCACCGTGCCAGTCGGCAGAAAAGTCTTC GAGCGCTCTCTGCCGACGATCCTTGAAGATGCCGAGAATGGCTTGCCTGACTTTATCCGCGCCTTGGTATTACGCCTGAG AGAACGGTGGCAACAGCTGGATATTCAGATTGATGACATGAGCCTCATGCTCGGACAAGCCTCAAGCGCATCAGGTTTGT GCCAAAAAATCAGTACTGTCCCCGGCATTGGACCGATTGTCTCAACCGCGTTAATTGCCGCGATTGGCAATGGTTCACAA TTCAAGAAAGCCCGCGACCTGTCAGCCTGGTTGGGGCTGGTCCCCAGGCAATATTCAACGGGCGGCAAATCTTCGCTCGG CGGGATTAGTAAGCGTGGCAATAGCTATTTAAGGCAAATGGTTATTCAGGGCGCCAAAGCGCTAAAAATTCACATGAAGC GTGACAAATCATCGTTAGGCGAATGGGTCGCGAGGCTGGAGGCCGGCCATCACCATCATGTGGTCCTTATCGCCTTGGCC AACAAGATAATGCGAATTTGCTGGAAAGTACTGACATCCGGCAGGGATTACCAACCCTATCCCAACGCAAGCGCAGCCGT TTAA
Upstream 100 bases:
>100_bases ACATGGTTGTTGCGTTGATCAATTGAATCTACAGCGGCCTAATGGGATGGTCTGCTCCATCCACCCCGCTATGCTGTAGC CAGCATCAAGGAGGCTCATC
Downstream 100 bases:
>100_bases CAGATATAACTCATACCCGGTTTTGCGAGCCAAAAACAGATGACAGAAGCGTTCACCCCACGACGTTGCAGCCTGGCTAA AAAAGCAGTCTCTCATGACT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTQAQIYIYGIDLGKNWFHLVAMDRMGHVLTKQKLTRSQLKWFISTTPPCRVAFEACPGSQYWGRLFQQAGFEPKIIPAQ FVKPYLKSNKNDFNDATAIAEAGSRGTMRCVPLKSHEQLALQATHRVRQRFIIERTATVNQMRALLLEYGLTVPVGRKVF ERSLPTILEDAENGLPDFIRALVLRLRERWQQLDIQIDDMSLMLGQASSASGLCQKISTVPGIGPIVSTALIAAIGNGSQ FKKARDLSAWLGLVPRQYSTGGKSSLGGISKRGNSYLRQMVIQGAKALKIHMKRDKSSLGEWVARLEAGHHHHVVLIALA NKIMRICWKVLTSGRDYQPYPNASAAV
Sequences:
>Translated_347_residues MTQAQIYIYGIDLGKNWFHLVAMDRMGHVLTKQKLTRSQLK*FISTTPPCRVAFEACPGSQYWGRLFQQAGFEPKIIPAQ FVKPYLKSNKNDFNDATAIAEAGSRGTMRCVPLKSHEQLALQATHRVRQRFIIERTATVNQMRALLLEYGLTVPVGRKVF ERSLPTILEDAENGLPDFIRALVLRLRERWQQLDIQIDDMSLMLGQASSASGLCQKISTVPGIGPIVSTALIAAIGNGSQ FKKARDLSAWLGLVPRQYSTGGKSSLGGISKRGNSYLRQMVIQGAKALKIHMKRDKSSLGEWVARLEAGHHHHVVLIALA NKIMRICWKVLTSGRDYQPYPNASAAV >Mature_346_residues TQAQIYIYGIDLGKNWFHLVAMDRMGHVLTKQKLTRSQLK*FISTTPPCRVAFEACPGSQYWGRLFQQAGFEPKIIPAQF VKPYLKSNKNDFNDATAIAEAGSRGTMRCVPLKSHEQLALQATHRVRQRFIIERTATVNQMRALLLEYGLTVPVGRKVFE RSLPTILEDAENGLPDFIRALVLRLRERWQQLDIQIDDMSLMLGQASSASGLCQKISTVPGIGPIVSTALIAAIGNGSQF KKARDLSAWLGLVPRQYSTGGKSSLGGISKRGNSYLRQMVIQGAKALKIHMKRDKSSLGEWVARLEAGHHHHVVLIALAN KIMRICWKVLTSGRDYQPYPNASAAV
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 38505; Mature: 38374
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQAQIYIYGIDLGKNWFHLVAMDRMGHVLTKQKLTRSQLKFISTTPPCRVAFEACPGSQ CCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCHH YWGRLFQQAGFEPKIIPAQFVKPYLKSNKNDFNDATAIAEAGSRGTMRCVPLKSHEQLAL HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHH QATHRVRQRFIIERTATVNQMRALLLEYGLTVPVGRKVFERSLPTILEDAENGLPDFIRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH LVLRLRERWQQLDIQIDDMSLMLGQASSASGLCQKISTVPGIGPIVSTALIAAIGNGSQF HHHHHHHHHHHHCCEECCHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHH KKARDLSAWLGLVPRQYSTGGKSSLGGISKRGNSYLRQMVIQGAKALKIHMKRDKSSLGE HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHH WVARLEAGHHHHVVLIALANKIMRICWKVLTSGRDYQPYPNASAAV HHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TQAQIYIYGIDLGKNWFHLVAMDRMGHVLTKQKLTRSQLKFISTTPPCRVAFEACPGSQ CCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCHH YWGRLFQQAGFEPKIIPAQFVKPYLKSNKNDFNDATAIAEAGSRGTMRCVPLKSHEQLAL HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHH QATHRVRQRFIIERTATVNQMRALLLEYGLTVPVGRKVFERSLPTILEDAENGLPDFIRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH LVLRLRERWQQLDIQIDDMSLMLGQASSASGLCQKISTVPGIGPIVSTALIAAIGNGSQF HHHHHHHHHHHHCCEECCHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHH KKARDLSAWLGLVPRQYSTGGKSSLGGISKRGNSYLRQMVIQGAKALKIHMKRDKSSLGE HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHH WVARLEAGHHHHVVLIALANKIMRICWKVLTSGRDYQPYPNASAAV HHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7607411 [H]