Definition Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence.
Accession NC_009350
Length 155,098

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The map label for this gene is 145301480

Identifier: 145301480

GI number: 145301480

Start: 97248

End: 98291

Strand: Reverse

Name: 145301480

Synonym: ASA_P5G100

Alternate gene names: NA

Gene position: 98291-97248 (Counterclockwise)

Preceding gene: 145301481

Following gene: 145301477

Centisome position: 63.37

GC content: 51.92

Gene sequence:

>1044_bases
ATGACGCAAGCGCAGATTTACATTTACGGGATCGATTTAGGCAAAAATTGGTTTCACCTGGTGGCGATGGATCGCATGGG
GCATGTATTGACCAAGCAAAAGCTCACTCGTTCACAACTAAAATAGTTCATCAGTACGACCCCACCCTGTCGGGTCGCCT
TCGAGGCATGTCCTGGTTCGCAATACTGGGGGCGCCTGTTTCAACAGGCGGGGTTCGAACCCAAGATTATCCCTGCCCAA
TTTGTGAAGCCCTACCTCAAATCAAACAAGAATGACTTCAACGATGCTACCGCCATTGCCGAGGCTGGTAGCAGAGGCAC
TATGCGCTGTGTCCCGTTGAAATCTCATGAACAGTTGGCATTGCAGGCGACTCATCGAGTCCGTCAACGTTTCATCATCG
AACGTACCGCCACTGTCAATCAGATGCGAGCGTTGCTGCTGGAATATGGGCTCACCGTGCCAGTCGGCAGAAAAGTCTTC
GAGCGCTCTCTGCCGACGATCCTTGAAGATGCCGAGAATGGCTTGCCTGACTTTATCCGCGCCTTGGTATTACGCCTGAG
AGAACGGTGGCAACAGCTGGATATTCAGATTGATGACATGAGCCTCATGCTCGGACAAGCCTCAAGCGCATCAGGTTTGT
GCCAAAAAATCAGTACTGTCCCCGGCATTGGACCGATTGTCTCAACCGCGTTAATTGCCGCGATTGGCAATGGTTCACAA
TTCAAGAAAGCCCGCGACCTGTCAGCCTGGTTGGGGCTGGTCCCCAGGCAATATTCAACGGGCGGCAAATCTTCGCTCGG
CGGGATTAGTAAGCGTGGCAATAGCTATTTAAGGCAAATGGTTATTCAGGGCGCCAAAGCGCTAAAAATTCACATGAAGC
GTGACAAATCATCGTTAGGCGAATGGGTCGCGAGGCTGGAGGCCGGCCATCACCATCATGTGGTCCTTATCGCCTTGGCC
AACAAGATAATGCGAATTTGCTGGAAAGTACTGACATCCGGCAGGGATTACCAACCCTATCCCAACGCAAGCGCAGCCGT
TTAA

Upstream 100 bases:

>100_bases
ACATGGTTGTTGCGTTGATCAATTGAATCTACAGCGGCCTAATGGGATGGTCTGCTCCATCCACCCCGCTATGCTGTAGC
CAGCATCAAGGAGGCTCATC

Downstream 100 bases:

>100_bases
CAGATATAACTCATACCCGGTTTTGCGAGCCAAAAACAGATGACAGAAGCGTTCACCCCACGACGTTGCAGCCTGGCTAA
AAAAGCAGTCTCTCATGACT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MTQAQIYIYGIDLGKNWFHLVAMDRMGHVLTKQKLTRSQLKWFISTTPPCRVAFEACPGSQYWGRLFQQAGFEPKIIPAQ
FVKPYLKSNKNDFNDATAIAEAGSRGTMRCVPLKSHEQLALQATHRVRQRFIIERTATVNQMRALLLEYGLTVPVGRKVF
ERSLPTILEDAENGLPDFIRALVLRLRERWQQLDIQIDDMSLMLGQASSASGLCQKISTVPGIGPIVSTALIAAIGNGSQ
FKKARDLSAWLGLVPRQYSTGGKSSLGGISKRGNSYLRQMVIQGAKALKIHMKRDKSSLGEWVARLEAGHHHHVVLIALA
NKIMRICWKVLTSGRDYQPYPNASAAV

Sequences:

>Translated_347_residues
MTQAQIYIYGIDLGKNWFHLVAMDRMGHVLTKQKLTRSQLK*FISTTPPCRVAFEACPGSQYWGRLFQQAGFEPKIIPAQ
FVKPYLKSNKNDFNDATAIAEAGSRGTMRCVPLKSHEQLALQATHRVRQRFIIERTATVNQMRALLLEYGLTVPVGRKVF
ERSLPTILEDAENGLPDFIRALVLRLRERWQQLDIQIDDMSLMLGQASSASGLCQKISTVPGIGPIVSTALIAAIGNGSQ
FKKARDLSAWLGLVPRQYSTGGKSSLGGISKRGNSYLRQMVIQGAKALKIHMKRDKSSLGEWVARLEAGHHHHVVLIALA
NKIMRICWKVLTSGRDYQPYPNASAAV
>Mature_346_residues
TQAQIYIYGIDLGKNWFHLVAMDRMGHVLTKQKLTRSQLK*FISTTPPCRVAFEACPGSQYWGRLFQQAGFEPKIIPAQF
VKPYLKSNKNDFNDATAIAEAGSRGTMRCVPLKSHEQLALQATHRVRQRFIIERTATVNQMRALLLEYGLTVPVGRKVFE
RSLPTILEDAENGLPDFIRALVLRLRERWQQLDIQIDDMSLMLGQASSASGLCQKISTVPGIGPIVSTALIAAIGNGSQF
KKARDLSAWLGLVPRQYSTGGKSSLGGISKRGNSYLRQMVIQGAKALKIHMKRDKSSLGEWVARLEAGHHHHVVLIALAN
KIMRICWKVLTSGRDYQPYPNASAAV

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 38505; Mature: 38374

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQAQIYIYGIDLGKNWFHLVAMDRMGHVLTKQKLTRSQLKFISTTPPCRVAFEACPGSQ
CCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCHH
YWGRLFQQAGFEPKIIPAQFVKPYLKSNKNDFNDATAIAEAGSRGTMRCVPLKSHEQLAL
HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHH
QATHRVRQRFIIERTATVNQMRALLLEYGLTVPVGRKVFERSLPTILEDAENGLPDFIRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
LVLRLRERWQQLDIQIDDMSLMLGQASSASGLCQKISTVPGIGPIVSTALIAAIGNGSQF
HHHHHHHHHHHHCCEECCHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHH
KKARDLSAWLGLVPRQYSTGGKSSLGGISKRGNSYLRQMVIQGAKALKIHMKRDKSSLGE
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHH
WVARLEAGHHHHVVLIALANKIMRICWKVLTSGRDYQPYPNASAAV
HHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TQAQIYIYGIDLGKNWFHLVAMDRMGHVLTKQKLTRSQLKFISTTPPCRVAFEACPGSQ
CCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCHH
YWGRLFQQAGFEPKIIPAQFVKPYLKSNKNDFNDATAIAEAGSRGTMRCVPLKSHEQLAL
HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHH
QATHRVRQRFIIERTATVNQMRALLLEYGLTVPVGRKVFERSLPTILEDAENGLPDFIRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
LVLRLRERWQQLDIQIDDMSLMLGQASSASGLCQKISTVPGIGPIVSTALIAAIGNGSQF
HHHHHHHHHHHHCCEECCHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHH
KKARDLSAWLGLVPRQYSTGGKSSLGGISKRGNSYLRQMVIQGAKALKIHMKRDKSSLGE
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHH
WVARLEAGHHHHVVLIALANKIMRICWKVLTSGRDYQPYPNASAAV
HHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7607411 [H]