Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
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Accession | NC_009350 |
Length | 155,098 |
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The map label for this gene is ycjY [C]
Identifier: 145301469
GI number: 145301469
Start: 83726
End: 84586
Strand: Direct
Name: ycjY [C]
Synonym: ASA_P5G088
Alternate gene names: 145301469
Gene position: 83726-84586 (Clockwise)
Preceding gene: 145301468
Following gene: 145301478
Centisome position: 53.98
GC content: 41.0
Gene sequence:
>861_bases ATGAAAATTTCTACACACAAGCTTTCTGATGGCATTGTTTTGACGCTTCGTTCCTCTGCAGGTAGTAAAAAAAAACCAGT AATAATTTTGTGCCATGGTTTCTGTGGTATCAGAGAAATGCTGCTCCCTGATTTTGCTAAAGCATTTACTCATGCCGGTT TCTCTACCATCACGTTTGATTATCGAGGGTTCGGGGACAGTGATGGTGAGCCCGGACGTTTGGTTCCAACCATGCAGATT GACGATATTATTTCTGTTGTTAACTGGGCAAAAAGACAACCCAGTATTGATGCACATCGCATTGCTCTCTGGGGCACATC ACTTGGTGGGTGTCATGTATTCGGAGCGGCAGCCAAGGTTCCAGAAATAAAATGCATTGTCAGTCAATTAGCCTTTGCTG ACGGTGAAGAAATTGTCACTGGAAAAATGAATGAGCAAGAGAAAAAAGCCTTTCTTGTAACTTTGGACAAAATGTCTGAA AAGCAGAAAGTCACAGGTAAGGAAATGTTCGTTAGTGTCAATCGGGTGCTTAGTGATCCAGAATCAAAATTATTTTTTGA AGCAAATAGGGCGCGATATCCAAAGATGGACATCAAAATACCGTTTCTTACGGTAAAGGAAAGCCTACAGTACAAACCTG CATTATATGCCTCGCAAGTGACATGCCCAACTTTAGTCGTTATTGCAGGTCAGGATGCGGTTAATTCACCGGAACAGGGA AAAGCATTATTTAACGCTGTAGGGGCAAAAGAAAAAAGATTATATGAAGAAAATAACGCCCGTCATTACGACATTTATAC AGGGGAGAATTTTAAGAAAGTTGTCGATATTCAGACTGAATGGTTTAGGACATACCTGTAG
Upstream 100 bases:
>100_bases CTTTTTTGCATCCAGATAAGGATTTCTGTAAGGTTTACATGCTTGTATCAACGCCCACTCTCCCCCGTTAATTCCCTTTT ATAAAAGGACATAGATATTG
Downstream 100 bases:
>100_bases TCGACTAACAGCAGGCTCAACACAGTCTGCCTTTATAATATTTTGATGCCGATAAAGATAATTGTCGATATTGACGAACA AGGGGCCTATATGGCCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MKISTHKLSDGIVLTLRSSAGSKKKPVIILCHGFCGIREMLLPDFAKAFTHAGFSTITFDYRGFGDSDGEPGRLVPTMQI DDIISVVNWAKRQPSIDAHRIALWGTSLGGCHVFGAAAKVPEIKCIVSQLAFADGEEIVTGKMNEQEKKAFLVTLDKMSE KQKVTGKEMFVSVNRVLSDPESKLFFEANRARYPKMDIKIPFLTVKESLQYKPALYASQVTCPTLVVIAGQDAVNSPEQG KALFNAVGAKEKRLYEENNARHYDIYTGENFKKVVDIQTEWFRTYL
Sequences:
>Translated_286_residues MKISTHKLSDGIVLTLRSSAGSKKKPVIILCHGFCGIREMLLPDFAKAFTHAGFSTITFDYRGFGDSDGEPGRLVPTMQI DDIISVVNWAKRQPSIDAHRIALWGTSLGGCHVFGAAAKVPEIKCIVSQLAFADGEEIVTGKMNEQEKKAFLVTLDKMSE KQKVTGKEMFVSVNRVLSDPESKLFFEANRARYPKMDIKIPFLTVKESLQYKPALYASQVTCPTLVVIAGQDAVNSPEQG KALFNAVGAKEKRLYEENNARHYDIYTGENFKKVVDIQTEWFRTYL >Mature_286_residues MKISTHKLSDGIVLTLRSSAGSKKKPVIILCHGFCGIREMLLPDFAKAFTHAGFSTITFDYRGFGDSDGEPGRLVPTMQI DDIISVVNWAKRQPSIDAHRIALWGTSLGGCHVFGAAAKVPEIKCIVSQLAFADGEEIVTGKMNEQEKKAFLVTLDKMSE KQKVTGKEMFVSVNRVLSDPESKLFFEANRARYPKMDIKIPFLTVKESLQYKPALYASQVTCPTLVVIAGQDAVNSPEQG KALFNAVGAKEKRLYEENNARHYDIYTGENFKKVVDIQTEWFRTYL
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ycjY [H]
Homologues:
Organism=Escherichia coli, GI221142683, Length=263, Percent_Identity=23.9543726235741, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 31893; Mature: 31893
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISTHKLSDGIVLTLRSSAGSKKKPVIILCHGFCGIREMLLPDFAKAFTHAGFSTITFD CCCCCEECCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEE YRGFGDSDGEPGRLVPTMQIDDIISVVNWAKRQPSIDAHRIALWGTSLGGCHVFGAAAKV ECCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECCCCCC PEIKCIVSQLAFADGEEIVTGKMNEQEKKAFLVTLDKMSEKQKVTGKEMFVSVNRVLSDP CHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEHHHHCCHHHCCHHHHHHHHHHHHCCC ESKLFFEANRARYPKMDIKIPFLTVKESLQYKPALYASQVTCPTLVVIAGQDAVNSPEQG CHHEEEEECCCCCCCCEEEEEEEEECHHCCCCCCHHCCCCCCCEEEEEECCCCCCCCHHH KALFNAVGAKEKRLYEENNARHYDIYTGENFKKVVDIQTEWFRTYL HHHHHHHCCHHHHHHHCCCCEEEEEEECCCCEEEEEHHHHHHHHCC >Mature Secondary Structure MKISTHKLSDGIVLTLRSSAGSKKKPVIILCHGFCGIREMLLPDFAKAFTHAGFSTITFD CCCCCEECCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEE YRGFGDSDGEPGRLVPTMQIDDIISVVNWAKRQPSIDAHRIALWGTSLGGCHVFGAAAKV ECCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECCCCCC PEIKCIVSQLAFADGEEIVTGKMNEQEKKAFLVTLDKMSEKQKVTGKEMFVSVNRVLSDP CHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEHHHHCCHHHCCHHHHHHHHHHHHCCC ESKLFFEANRARYPKMDIKIPFLTVKESLQYKPALYASQVTCPTLVVIAGQDAVNSPEQG CHHEEEEECCCCCCCCEEEEEEEEECHHCCCCCCHHCCCCCCCEEEEEECCCCCCCCHHH KALFNAVGAKEKRLYEENNARHYDIYTGENFKKVVDIQTEWFRTYL HHHHHHHCCHHHHHHHCCCCEEEEEEECCCCEEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1916281 [H]