Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
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Accession | NC_009350 |
Length | 155,098 |
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The map label for this gene is ascE
Identifier: 145301438
GI number: 145301438
Start: 57250
End: 57462
Strand: Reverse
Name: ascE
Synonym: ASA_P5G055
Alternate gene names: NA
Gene position: 57462-57250 (Counterclockwise)
Preceding gene: 145301439
Following gene: 145301437
Centisome position: 37.05
GC content: 58.69
Gene sequence:
>213_bases ATGATGACCAGTTTGGAAGCGCGACTTTCCGGCGCTGATCCCGCCTTTGCCCGTGAACTGCATGAGCAGCTTGTTCAGGC GCAGGGAGACGTGAAGCGGCAACTGCTGAGCGGGGGAACCCCGCAACAGTATCGGGAGTGGAAAGAACAGGCCGACGCCA TCGAGGCGGGGCTCACGATCATTGGCAATTTAAAGGAGCACAACCATGGCTGA
Upstream 100 bases:
>100_bases ACCTCTAGCGGGGTGAGAGTGCTGGCCATTCGCCCCGATGCAGTGGTGGTGAGCAAGGGCAAGCAGCAATACATCGTCAA ATTAAAAGGAGCCGAGCGGT
Downstream 100 bases:
>100_bases TTACTTTACTTATACGGACAAGAACAGTAACACCCTCGATCAAGTGGCATCAAACCTCTCCGGGCAGGCCAATGACGCCA ACACCGAGGTCAACAAGGCC
Product: AscE protein
Products: NA
Alternate protein names: Type III Secretion Component Protein SctE
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MMTSLEARLSGADPAFARELHEQLVQAQGDVKRQLLSGGTPQQYREWKEQADAIEAGLTIIGNLKEHNHG
Sequences:
>Translated_70_residues MMTSLEARLSGADPAFARELHEQLVQAQGDVKRQLLSGGTPQQYREWKEQADAIEAGLTIIGNLKEHNHG >Mature_70_residues MMTSLEARLSGADPAFARELHEQLVQAQGDVKRQLLSGGTPQQYREWKEQADAIEAGLTIIGNLKEHNHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7742; Mature: 7742
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTSLEARLSGADPAFARELHEQLVQAQGDVKRQLLSGGTPQQYREWKEQADAIEAGLTI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH IGNLKEHNHG HCCCCCCCCC >Mature Secondary Structure MMTSLEARLSGADPAFARELHEQLVQAQGDVKRQLLSGGTPQQYREWKEQADAIEAGLTI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH IGNLKEHNHG HCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA