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The map label for this gene is ascJ [H]

Identifier: 145301433

GI number: 145301433

Start: 55011

End: 55739

Strand: Reverse

Name: ascJ [H]

Synonym: ASA_P5G050

Alternate gene names: 145301433

Gene position: 55739-55011 (Counterclockwise)

Preceding gene: 145301434

Following gene: 145301432

Centisome position: 35.94

GC content: 59.12

Gene sequence:

>729_bases
ATGCTGATGGGGGTGCTTGGCGCCTCGCTGCTGCTCAATGGCTGCAAAGTGGAGCTCTATACCGGGGTCACTCAGAAAGA
GGGCAACGAGATGCTAGCGCTGCTGCAAACCGAGGGGATCGCCTCGGACAAGCAGCCGGACAAGGATGGCCGCATCAAGC
TGCTGGTGGAGGAGTCTGACGTGGCACAGGCCATCGAGACCCTCAAACGCAAGGGCTATCCAAAAGAGAGCTTCTCCACT
CTGCAGGATGTGTTTCCCAAGGATGGCCTCATCTCTTCGCCCACCGAGGAGCGGGCTCGCCTCACCTATGCCAAGGCGCA
GGAGATCTCCAATACCCTGTCGGAAATAGACGGCGTGCTGGTGGCTCGTGTCCATGTGGTGCTGCCGGAAGGCAATGAAG
GGATCAGCAAGAAACCCTCTCCCGCATCGGCCTCGGTCTTTATCAAGCATGCGGCGGATATCCAACTCGATACTTACATT
CCGCAGATCAAACAGCTGGTCAACAACAGTATCGAGGGGCTCGCCTACGACCGGATCAGTGTGGTGCTGGTGCCCTCGGC
GGATGTGCGCCAGAGTCCGCTGATGGCGCGCAATACCTCGCTCTTCTCCATTGAAGTGGGCGAAGGTTCAAAATGGCGGC
TGGGCGGCTTGATTGCCCTGTTGCTGGCGCTGGTGGTAACCAGCAACCTGGCGCAATACATGTGGCACCGGAGCCGGAGT
CGCGGATGA

Upstream 100 bases:

>100_bases
GATCACCATGCAGGAGGAGCTTATTGCCAAGACAGTGGGCAAGATGAGCCAGAACGTAGAAACCCTGTTGAAGACCCAGT
GAGGTAGTGTGAAGAGATCG

Downstream 100 bases:

>100_bases
CGGTCGGTTTGACCCCCTATCAGCTGCGCTTTTGCCCGGCCAGTTATCTCCATGAGGCTCACCTGCCCTCATCTTGGGCG
CAGGTGCCGAAGCTCTTGCC

Product: AscJ protein

Products: NA

Alternate protein names: Lipoprotein ylpB [H]

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MLMGVLGASLLLNGCKVELYTGVTQKEGNEMLALLQTEGIASDKQPDKDGRIKLLVEESDVAQAIETLKRKGYPKESFST
LQDVFPKDGLISSPTEERARLTYAKAQEISNTLSEIDGVLVARVHVVLPEGNEGISKKPSPASASVFIKHAADIQLDTYI
PQIKQLVNNSIEGLAYDRISVVLVPSADVRQSPLMARNTSLFSIEVGEGSKWRLGGLIALLLALVVTSNLAQYMWHRSRS
RG

Sequences:

>Translated_242_residues
MLMGVLGASLLLNGCKVELYTGVTQKEGNEMLALLQTEGIASDKQPDKDGRIKLLVEESDVAQAIETLKRKGYPKESFST
LQDVFPKDGLISSPTEERARLTYAKAQEISNTLSEIDGVLVARVHVVLPEGNEGISKKPSPASASVFIKHAADIQLDTYI
PQIKQLVNNSIEGLAYDRISVVLVPSADVRQSPLMARNTSLFSIEVGEGSKWRLGGLIALLLALVVTSNLAQYMWHRSRS
RG
>Mature_242_residues
MLMGVLGASLLLNGCKVELYTGVTQKEGNEMLALLQTEGIASDKQPDKDGRIKLLVEESDVAQAIETLKRKGYPKESFST
LQDVFPKDGLISSPTEERARLTYAKAQEISNTLSEIDGVLVARVHVVLPEGNEGISKKPSPASASVFIKHAADIQLDTYI
PQIKQLVNNSIEGLAYDRISVVLVPSADVRQSPLMARNTSLFSIEVGEGSKWRLGGLIALLLALVVTSNLAQYMWHRSRS
RG

Specific function: Required for the export process of the Yop proteins [H]

COG id: COG4669

COG function: function code U; Type III secretory pathway, lipoprotein EscJ

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yscJ lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003282
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF [H]

EC number: NA

Molecular weight: Translated: 26361; Mature: 26361

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMGVLGASLLLNGCKVELYTGVTQKEGNEMLALLQTEGIASDKQPDKDGRIKLLVEESD
CCHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECHH
VAQAIETLKRKGYPKESFSTLQDVFPKDGLISSPTEERARLTYAKAQEISNTLSEIDGVL
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHE
VARVHVVLPEGNEGISKKPSPASASVFIKHAADIQLDTYIPQIKQLVNNSIEGLAYDRIS
EEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEHHHHHHHHHHHHCCCCCCEEECCEE
VVLVPSADVRQSPLMARNTSLFSIEVGEGSKWRLGGLIALLLALVVTSNLAQYMWHRSRS
EEEECCCCCCCCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RG
CC
>Mature Secondary Structure
MLMGVLGASLLLNGCKVELYTGVTQKEGNEMLALLQTEGIASDKQPDKDGRIKLLVEESD
CCHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECHH
VAQAIETLKRKGYPKESFSTLQDVFPKDGLISSPTEERARLTYAKAQEISNTLSEIDGVL
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHE
VARVHVVLPEGNEGISKKPSPASASVFIKHAADIQLDTYIPQIKQLVNNSIEGLAYDRIS
EEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEHHHHHHHHHHHHCCCCCCEEECCEE
VVLVPSADVRQSPLMARNTSLFSIEVGEGSKWRLGGLIALLLALVVTSNLAQYMWHRSRS
EEEECCCCCCCCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1860816 [H]