Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
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Accession | NC_009350 |
Length | 155,098 |
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The map label for this gene is 145301400
Identifier: 145301400
GI number: 145301400
Start: 15395
End: 15820
Strand: Direct
Name: 145301400
Synonym: ASA_P5G016
Alternate gene names: NA
Gene position: 15395-15820 (Clockwise)
Preceding gene: 145301398
Following gene: 145301401
Centisome position: 9.93
GC content: 41.78
Gene sequence:
>426_bases ATGAGTTATACATCAGAGCTTACAGAAAAAGATATCCAAAATATGGAAACATTCATAGAGCTCGTACTTGACGATTACAA GCTCGGAAAGCTTTCAAAATCACATGCTATTTCTGGGATTACTCATGTTATGGTCGCCCTTGAACTGGATAATTACACCG AAGTTAGAACTTGGTTTGAACAAGGAAGTAAATTAATCAACTCTGTAACAGAGAACGTTATAACCGAACGTCTACAGTCA GGGTGGGAGTTATCTAACCGAGGACAGGGATGGTATCTATCTTCGCCCAGTAAGCCGGATCGGCAGTCAGAATCCAGCTA TGTCCCAGATGATGTTATTCATAAAATGGTGCAGGATAATGTGCTTAAAACAATCATCCAGTACTCGACAGGCCGGGCTG AGTTGGTTAAAACCGGTAGCAGCTGA
Upstream 100 bases:
>100_bases GGTCAGTAACCGAAATTTCTAGGGTTTCAGCTTACAACTCTTATCTACGCTCTATATATTTAAAATAGAGAATCAACCAT TTTTTACATGAGAAAATTTG
Downstream 100 bases:
>100_bases TTAACTCGGTTAGGGGTATGAAGCCCAATGGAACAGTTCTGTACGGTAAGCCGTTGACCTCCCAAACCGGCAATCAGGGG GTGACATGAGTCCCCCAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSYTSELTEKDIQNMETFIELVLDDYKLGKLSKSHAISGITHVMVALELDNYTEVRTWFEQGSKLINSVTENVITERLQS GWELSNRGQGWYLSSPSKPDRQSESSYVPDDVIHKMVQDNVLKTIIQYSTGRAELVKTGSS
Sequences:
>Translated_141_residues MSYTSELTEKDIQNMETFIELVLDDYKLGKLSKSHAISGITHVMVALELDNYTEVRTWFEQGSKLINSVTENVITERLQS GWELSNRGQGWYLSSPSKPDRQSESSYVPDDVIHKMVQDNVLKTIIQYSTGRAELVKTGSS >Mature_140_residues SYTSELTEKDIQNMETFIELVLDDYKLGKLSKSHAISGITHVMVALELDNYTEVRTWFEQGSKLINSVTENVITERLQSG WELSNRGQGWYLSSPSKPDRQSESSYVPDDVIHKMVQDNVLKTIIQYSTGRAELVKTGSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15993; Mature: 15862
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYTSELTEKDIQNMETFIELVLDDYKLGKLSKSHAISGITHVMVALELDNYTEVRTWFE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH QGSKLINSVTENVITERLQSGWELSNRGQGWYLSSPSKPDRQSESSYVPDDVIHKMVQDN HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHH VLKTIIQYSTGRAELVKTGSS HHHHHHHHCCCHHHHHCCCCC >Mature Secondary Structure SYTSELTEKDIQNMETFIELVLDDYKLGKLSKSHAISGITHVMVALELDNYTEVRTWFE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH QGSKLINSVTENVITERLQSGWELSNRGQGWYLSSPSKPDRQSESSYVPDDVIHKMVQDN HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHH VLKTIIQYSTGRAELVKTGSS HHHHHHHHCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA