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The map label for this gene is ydiF [H]

Identifier: 145300035

GI number: 145300035

Start: 3388450

End: 3390183

Strand: Direct

Name: ydiF [H]

Synonym: ASA_3134

Alternate gene names: 145300035

Gene position: 3388450-3390183 (Clockwise)

Preceding gene: 145300034

Following gene: 145300036

Centisome position: 72.06

GC content: 65.51

Gene sequence:

>1734_bases
ATGACAACCCTGATGAGTACCCATTCCCTGCACATGACGGCAGGACACCTTCCCCTGTTTGACAGCGTCGACCTCAGCAT
CCGCAGCGGTGATCGCATCGGCCTTATCGGTGCCAATGGCAGCGGCAAGAGCACACTGCTCGCCCTGCTGGCCGGTCAGC
TCGATCCCCATGACGGACGCGTGCATCACGCAGCGGCTTGCCGTTGTGAATTCGTGGCTCAACATCTGCCCGCACGCCTG
CAGGCGCTCACCGCCCGCGCCGTACTGCTCGATGCAGTGGACGGGGATCCCGCGCTCGACTGGCAGGTGGACAAGATGCT
GACCGAGCTGCAGCTTGAAGCACAGGCCGCGTTACCGGTCAGCGCCCTGAGCGGTGGCCAGCACACCCGATTGCAGATAG
GCCGCGCCCTGCTGCGCCAGCCCAATCTGTTGCTGCTCGATGAGCCCAGCAACCACCTGGACTTGCCCGCTCTGCTCTGG
CTGGAGCGCTTCCTGCTGAGCTGGCGCGGCGCTTTCGTGCTGGTGTCCCACGATGGCCGCCTGCTCGACCGGGTCACCCG
CGAGACCCTGATCCTGCGTGACCGATGCCTCTATCGCTTCGCCCTGCCTTGCACCCAGGCCAGGGCGGCCCAGGCGGAAG
AGGACGAGCAAGCCCGTTTGCGCCGGGCCGACGAGCAGAAGGAGATCGACCGCCTGAGCGCCAGCAGCAAACGCCTCGCC
ATCTGGGGGCGGGAGCATGACAACGAGAAGCTGGTGCGTCAGGCCAAATCCATGGAGAAACGGATTGCCAGGATGCAGGA
GGAGCAGAGCGTTGTCGGTGCCGGCGCCCCCTGGCGCCTCGAACTGCACGGGCAGGCACTGCCCGCCGATGCCCTGCTGC
GGCTGGACGCCCTCGACGTGCGCCCCGCTCCCGGCTTGCCTCCCCTGCTGCGGGCCGAGGATCTCGGACTGCGAGCCGGA
GACAGGGTTGCCCTGCTCGGTGCCAATGGCACCGGCAAGTCCTCCCTGCTGCGTCAGTGCTGGCACGATCTGCGCGCTCA
ACTACCGGGTGAAGGCTGGCACCGCCACCCCGGCGCCAGCATCGCCTACTACGATCAGTCCCTGCAGCAGCTCGATGACG
CTGCAACGCTGACCGATGCCCTCTATTGTCTGGCCCCCCTGCCCGAGGTGACGCTGCGCCAGGCCTTGATCCGTGCAGGT
TTCCCCTACTCCCGTCACGGGCAACGCGTGCATAGCCTGAGCGGTGGTGAGCGGGCCAGGCTGCTGTTTCTCGCCCTGTC
GCTGGCGAGCCACCATCTGCTCTGGCTGGATGAACCCACCAACCATCTGGATCTGGAAGGAAAAGAAGATCTGGCCGAGG
CGCTGTCGCGTTTTGCCGGTGGCGTGCTGCTGATCTCCCACGACCGAGATCTGATCGAGCGCAGTTGCAATCGGTTCTGG
GTGATCAGGGAAGGCCGGATTGTCGAAGCCCACAGTGCCGAGCGGGCCTATGCCGAGTTTCTCTGTGATGAACCCATGGA
CCTTTCAATCAGCCCCGCCACCAATGGCAGTCCGCAGGAGCAAGCTACTGTGGAGGATGACGAAGAGGCGCTGCTGGCAC
GCTGGTACGAGCTGGATGCCCTGCTCGCCGCCGACCTCGCCCGCAAGCCCAGGCATCAGACACCCCGGCTGCAACAACAG
TGGCGCGACGAGTTGCAGCAGCAGGCCGGTTTGCTTGGCCTCCCAGCGAACTGA

Upstream 100 bases:

>100_bases
CCGACTCCCTTCCAAACCGAGACCTTTCTCGACTCTGCCGTTGTCGCCAGCGCTCCTGATGACAGGGATATTCGATCCCG
TGATTTTAGAGAGCAAGAGC

Downstream 100 bases:

>100_bases
CGCCAGCAGTCACACCTTCACACAACTGTCTTTCCCAATCAGGCGGCCTGCCAACACAGGCCGCACAGGAGAAGAGCATG
AATTCACGACGAGGGGGCGA

Product: ABC-type transporter, ATP binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 577; Mature: 576

Protein sequence:

>577_residues
MTTLMSTHSLHMTAGHLPLFDSVDLSIRSGDRIGLIGANGSGKSTLLALLAGQLDPHDGRVHHAAACRCEFVAQHLPARL
QALTARAVLLDAVDGDPALDWQVDKMLTELQLEAQAALPVSALSGGQHTRLQIGRALLRQPNLLLLDEPSNHLDLPALLW
LERFLLSWRGAFVLVSHDGRLLDRVTRETLILRDRCLYRFALPCTQARAAQAEEDEQARLRRADEQKEIDRLSASSKRLA
IWGREHDNEKLVRQAKSMEKRIARMQEEQSVVGAGAPWRLELHGQALPADALLRLDALDVRPAPGLPPLLRAEDLGLRAG
DRVALLGANGTGKSSLLRQCWHDLRAQLPGEGWHRHPGASIAYYDQSLQQLDDAATLTDALYCLAPLPEVTLRQALIRAG
FPYSRHGQRVHSLSGGERARLLFLALSLASHHLLWLDEPTNHLDLEGKEDLAEALSRFAGGVLLISHDRDLIERSCNRFW
VIREGRIVEAHSAERAYAEFLCDEPMDLSISPATNGSPQEQATVEDDEEALLARWYELDALLAADLARKPRHQTPRLQQQ
WRDELQQQAGLLGLPAN

Sequences:

>Translated_577_residues
MTTLMSTHSLHMTAGHLPLFDSVDLSIRSGDRIGLIGANGSGKSTLLALLAGQLDPHDGRVHHAAACRCEFVAQHLPARL
QALTARAVLLDAVDGDPALDWQVDKMLTELQLEAQAALPVSALSGGQHTRLQIGRALLRQPNLLLLDEPSNHLDLPALLW
LERFLLSWRGAFVLVSHDGRLLDRVTRETLILRDRCLYRFALPCTQARAAQAEEDEQARLRRADEQKEIDRLSASSKRLA
IWGREHDNEKLVRQAKSMEKRIARMQEEQSVVGAGAPWRLELHGQALPADALLRLDALDVRPAPGLPPLLRAEDLGLRAG
DRVALLGANGTGKSSLLRQCWHDLRAQLPGEGWHRHPGASIAYYDQSLQQLDDAATLTDALYCLAPLPEVTLRQALIRAG
FPYSRHGQRVHSLSGGERARLLFLALSLASHHLLWLDEPTNHLDLEGKEDLAEALSRFAGGVLLISHDRDLIERSCNRFW
VIREGRIVEAHSAERAYAEFLCDEPMDLSISPATNGSPQEQATVEDDEEALLARWYELDALLAADLARKPRHQTPRLQQQ
WRDELQQQAGLLGLPAN
>Mature_576_residues
TTLMSTHSLHMTAGHLPLFDSVDLSIRSGDRIGLIGANGSGKSTLLALLAGQLDPHDGRVHHAAACRCEFVAQHLPARLQ
ALTARAVLLDAVDGDPALDWQVDKMLTELQLEAQAALPVSALSGGQHTRLQIGRALLRQPNLLLLDEPSNHLDLPALLWL
ERFLLSWRGAFVLVSHDGRLLDRVTRETLILRDRCLYRFALPCTQARAAQAEEDEQARLRRADEQKEIDRLSASSKRLAI
WGREHDNEKLVRQAKSMEKRIARMQEEQSVVGAGAPWRLELHGQALPADALLRLDALDVRPAPGLPPLLRAEDLGLRAGD
RVALLGANGTGKSSLLRQCWHDLRAQLPGEGWHRHPGASIAYYDQSLQQLDDAATLTDALYCLAPLPEVTLRQALIRAGF
PYSRHGQRVHSLSGGERARLLFLALSLASHHLLWLDEPTNHLDLEGKEDLAEALSRFAGGVLLISHDRDLIERSCNRFWV
IREGRIVEAHSAERAYAEFLCDEPMDLSISPATNGSPQEQATVEDDEEALLARWYELDALLAADLARKPRHQTPRLQQQW
RDELQQQAGLLGLPAN

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI10947137, Length=536, Percent_Identity=29.6641791044776, Blast_Score=176, Evalue=7e-44,
Organism=Homo sapiens, GI27881506, Length=536, Percent_Identity=29.6641791044776, Blast_Score=176, Evalue=7e-44,
Organism=Homo sapiens, GI10947135, Length=523, Percent_Identity=28.4894837476099, Blast_Score=167, Evalue=4e-41,
Organism=Homo sapiens, GI69354671, Length=523, Percent_Identity=28.4894837476099, Blast_Score=166, Evalue=6e-41,
Organism=Homo sapiens, GI148612853, Length=541, Percent_Identity=28.4658040665434, Blast_Score=164, Evalue=3e-40,
Organism=Escherichia coli, GI1789751, Length=572, Percent_Identity=30.0699300699301, Blast_Score=189, Evalue=3e-49,
Organism=Escherichia coli, GI1787182, Length=547, Percent_Identity=28.7020109689214, Blast_Score=174, Evalue=1e-44,
Organism=Escherichia coli, GI1787041, Length=545, Percent_Identity=27.1559633027523, Blast_Score=169, Evalue=5e-43,
Organism=Escherichia coli, GI2367384, Length=529, Percent_Identity=29.4896030245747, Blast_Score=146, Evalue=3e-36,
Organism=Escherichia coli, GI87081834, Length=195, Percent_Identity=33.8461538461538, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1788165, Length=199, Percent_Identity=29.6482412060301, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1788761, Length=195, Percent_Identity=30.2564102564103, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786703, Length=221, Percent_Identity=27.6018099547511, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1787164, Length=189, Percent_Identity=31.7460317460317, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=533, Percent_Identity=30.9568480300188, Blast_Score=181, Evalue=8e-46,
Organism=Caenorhabditis elegans, GI17555318, Length=517, Percent_Identity=28.4332688588008, Blast_Score=173, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI17559834, Length=539, Percent_Identity=27.0871985157699, Blast_Score=172, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI71992290, Length=171, Percent_Identity=28.0701754385965, Blast_Score=70, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6321121, Length=405, Percent_Identity=31.1111111111111, Blast_Score=159, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6320874, Length=507, Percent_Identity=27.6134122287968, Blast_Score=151, Evalue=3e-37,
Organism=Saccharomyces cerevisiae, GI6323278, Length=350, Percent_Identity=24.5714285714286, Blast_Score=92, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6324314, Length=210, Percent_Identity=31.4285714285714, Blast_Score=87, Evalue=8e-18,
Organism=Saccharomyces cerevisiae, GI6325030, Length=226, Percent_Identity=30.5309734513274, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24666836, Length=531, Percent_Identity=29.5668549905838, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24642252, Length=504, Percent_Identity=30.5555555555556, Blast_Score=179, Evalue=4e-45,
Organism=Drosophila melanogaster, GI18859989, Length=504, Percent_Identity=30.5555555555556, Blast_Score=179, Evalue=4e-45,
Organism=Drosophila melanogaster, GI24641342, Length=527, Percent_Identity=28.6527514231499, Blast_Score=178, Evalue=1e-44,
Organism=Drosophila melanogaster, GI24653245, Length=158, Percent_Identity=31.6455696202532, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI281363262, Length=158, Percent_Identity=31.6455696202532, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI116007184, Length=178, Percent_Identity=28.6516853932584, Blast_Score=66, Evalue=6e-11,
Organism=Drosophila melanogaster, GI221500365, Length=178, Percent_Identity=28.6516853932584, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 64070; Mature: 63939

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLMSTHSLHMTAGHLPLFDSVDLSIRSGDRIGLIGANGSGKSTLLALLAGQLDPHDGR
CCCEECCCEEEEEECCCCCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCC
VHHAAACRCEFVAQHLPARLQALTARAVLLDAVDGDPALDWQVDKMLTELQLEAQAALPV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCH
SALSGGQHTRLQIGRALLRQPNLLLLDEPSNHLDLPALLWLERFLLSWRGAFVLVSHDGR
HHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCH
LLDRVTRETLILRDRCLYRFALPCTQARAAQAEEDEQARLRRADEQKEIDRLSASSKRLA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE
IWGREHDNEKLVRQAKSMEKRIARMQEEQSVVGAGAPWRLELHGQALPADALLRLDALDV
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHEEEEECC
RPAPGLPPLLRAEDLGLRAGDRVALLGANGTGKSSLLRQCWHDLRAQLPGEGWHRHPGAS
CCCCCCCCCCCHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCE
IAYYDQSLQQLDDAATLTDALYCLAPLPEVTLRQALIRAGFPYSRHGQRVHSLSGGERAR
EEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEHHCCCCCHHH
LLFLALSLASHHLLWLDEPTNHLDLEGKEDLAEALSRFAGGVLLISHDRDLIERSCNRFW
HHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHCCCEEE
VIREGRIVEAHSAERAYAEFLCDEPMDLSISPATNGSPQEQATVEDDEEALLARWYELDA
EEECCEEEECCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LLAADLARKPRHQTPRLQQQWRDELQQQAGLLGLPAN
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TTLMSTHSLHMTAGHLPLFDSVDLSIRSGDRIGLIGANGSGKSTLLALLAGQLDPHDGR
CCEECCCEEEEEECCCCCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCC
VHHAAACRCEFVAQHLPARLQALTARAVLLDAVDGDPALDWQVDKMLTELQLEAQAALPV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCH
SALSGGQHTRLQIGRALLRQPNLLLLDEPSNHLDLPALLWLERFLLSWRGAFVLVSHDGR
HHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCH
LLDRVTRETLILRDRCLYRFALPCTQARAAQAEEDEQARLRRADEQKEIDRLSASSKRLA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE
IWGREHDNEKLVRQAKSMEKRIARMQEEQSVVGAGAPWRLELHGQALPADALLRLDALDV
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHEEEEECC
RPAPGLPPLLRAEDLGLRAGDRVALLGANGTGKSSLLRQCWHDLRAQLPGEGWHRHPGAS
CCCCCCCCCCCHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCE
IAYYDQSLQQLDDAATLTDALYCLAPLPEVTLRQALIRAGFPYSRHGQRVHSLSGGERAR
EEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEHHCCCCCHHH
LLFLALSLASHHLLWLDEPTNHLDLEGKEDLAEALSRFAGGVLLISHDRDLIERSCNRFW
HHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHCCCEEE
VIREGRIVEAHSAERAYAEFLCDEPMDLSISPATNGSPQEQATVEDDEEALLARWYELDA
EEECCEEEECCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LLAADLARKPRHQTPRLQQQWRDELQQQAGLLGLPAN
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]