| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145299944
Identifier: 145299944
GI number: 145299944
Start: 3270185
End: 3270721
Strand: Direct
Name: 145299944
Synonym: ASA_3036
Alternate gene names: NA
Gene position: 3270185-3270721 (Clockwise)
Preceding gene: 145299943
Following gene: 145299945
Centisome position: 69.54
GC content: 28.86
Gene sequence:
>537_bases TTGACAAAAAAAATAAATGACATACCTCATCCAAATTGTTTGATATTGGTCGAAGGAGAAAGTGAAGAAATATTTATACC TATAATAGCTTTTAGATTGGCAGCCGATTTTAAAGGCAAGAAAATCAAAATTTACAATTCTAAGTCCAAACAGAAACTAT TAAGTGATTTTTTATCTTTCAAAGAAAAATATCCAAAACTAAAGATAGTATGCTTACTTGATTCAGATGCAAAAAAAGAA AAGAATGACATTGAAAGAGTAATTTCAAATAACTTACACAAATATCGTCTCATTTATATTAAAAAAGGTGCATTTGAGGA TGCATTTGACATTGATACATCAATCAGTGTCATAAATGAAATGTATCCATTAGGGAGCTTAATAGTTAAAGAAGACATTG ATCAAACAAAGGACTTCGCAAAAAAAATAGCTTTTTGCATAGGCATCGACAAAATACCTTCAGAAATACAAGAGATAATT GACCTTGGCATGTTATTAACTAGGGAAAGTATTTTTACACCTAAAGATGAAATCTAG
Upstream 100 bases:
>100_bases TTTATTGAAAATCGATGGTTATATCGAGAAGTTAGCATTATGTTCTTTGACGAGTATGTATCTAATTTTACTGATGTCAT ATTTAAAAACATAGCTGATT
Downstream 100 bases:
>100_bases GATGTACAGATCTAAATAGCTGTTCCGAATAGTAGATCACCGGAGGAAGGGAACTCAGTCCAGTTTGTGCGATCTCATTA GTCGCCAAACAAAACAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MTKKINDIPHPNCLILVEGESEEIFIPIIAFRLAADFKGKKIKIYNSKSKQKLLSDFLSFKEKYPKLKIVCLLDSDAKKE KNDIERVISNNLHKYRLIYIKKGAFEDAFDIDTSISVINEMYPLGSLIVKEDIDQTKDFAKKIAFCIGIDKIPSEIQEII DLGMLLTRESIFTPKDEI
Sequences:
>Translated_178_residues MTKKINDIPHPNCLILVEGESEEIFIPIIAFRLAADFKGKKIKIYNSKSKQKLLSDFLSFKEKYPKLKIVCLLDSDAKKE KNDIERVISNNLHKYRLIYIKKGAFEDAFDIDTSISVINEMYPLGSLIVKEDIDQTKDFAKKIAFCIGIDKIPSEIQEII DLGMLLTRESIFTPKDEI >Mature_177_residues TKKINDIPHPNCLILVEGESEEIFIPIIAFRLAADFKGKKIKIYNSKSKQKLLSDFLSFKEKYPKLKIVCLLDSDAKKEK NDIERVISNNLHKYRLIYIKKGAFEDAFDIDTSISVINEMYPLGSLIVKEDIDQTKDFAKKIAFCIGIDKIPSEIQEIID LGMLLTRESIFTPKDEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20445; Mature: 20314
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKINDIPHPNCLILVEGESEEIFIPIIAFRLAADFKGKKIKIYNSKSKQKLLSDFLSF CCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHH KEKYPKLKIVCLLDSDAKKEKNDIERVISNNLHKYRLIYIKKGAFEDAFDIDTSISVINE HHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHH MYPLGSLIVKEDIDQTKDFAKKIAFCIGIDKIPSEIQEIIDLGMLLTRESIFTPKDEI HCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TKKINDIPHPNCLILVEGESEEIFIPIIAFRLAADFKGKKIKIYNSKSKQKLLSDFLSF CCCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHH KEKYPKLKIVCLLDSDAKKEKNDIERVISNNLHKYRLIYIKKGAFEDAFDIDTSISVINE HHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHH MYPLGSLIVKEDIDQTKDFAKKIAFCIGIDKIPSEIQEIIDLGMLLTRESIFTPKDEI HCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA