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The map label for this gene is yafM [C]

Identifier: 145299940

GI number: 145299940

Start: 3267441

End: 3267956

Strand: Direct

Name: yafM [C]

Synonym: ASA_3032

Alternate gene names: 145299940

Gene position: 3267441-3267956 (Clockwise)

Preceding gene: 145299935

Following gene: 145299941

Centisome position: 69.48

GC content: 51.94

Gene sequence:

>516_bases
ATGCGCTATCGCCGAGCAACAACCATTGGGGCATGTTGGTTCTTCACCGTCAACCTAGCTGACCGAAAACAGGATCTGCT
GGTACGTCATATCGACCTGCTGCGCGAAGTGCTCCGCCACGTCAAACAGCAACACCCCTTCGAGATTATTGCCATGGTGG
TGATGCCGGATCATCTCCATGCCATATGGCAACTACCGCCGGGTGACAGTGACTATCCCATGTGCTGGTCTCTGATCAAG
GCAGGCTTTTCACGGGGCATTGCCAAAACAGAGCGGATACGGGAGAGCCGACTCAGAAAACGGGAACGAGGTATCTGGCA
ACGACGTTATTGGGAACATCTGATCCGGGATGACAAGGATCTGCAAGCCCATGTCGATTACATCCACTTCAATCCGGTCA
AACATGGTTATTGTGACAAACCGGTCGATTGGCCTTACTCCTCCATTCATCGCCATATCGCCGCCGGATGGATAGAGTCA
GATTGGACAATTAATAGTGACTCGGATCGGGAATAA

Upstream 100 bases:

>100_bases
GTTGGCGCTGAGCGTAGCGAAGCCCAACACACGAGTCCTCGGTCAGTTGGTGGCCATTCGGTGCAACCGAACAGACTGGA
TATTTCCGGAAAGGAGAACC

Downstream 100 bases:

>100_bases
TAGGTTACTAGACTCTATAAATTGGCTAGGAATATATAAACAAAAACATTTACAATATTTTAAACGCAGGGTCAACAATG
AAAGAAAAGGATAAATATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MRYRRATTIGACWFFTVNLADRKQDLLVRHIDLLREVLRHVKQQHPFEIIAMVVMPDHLHAIWQLPPGDSDYPMCWSLIK
AGFSRGIAKTERIRESRLRKRERGIWQRRYWEHLIRDDKDLQAHVDYIHFNPVKHGYCDKPVDWPYSSIHRHIAAGWIES
DWTINSDSDRE

Sequences:

>Translated_171_residues
MRYRRATTIGACWFFTVNLADRKQDLLVRHIDLLREVLRHVKQQHPFEIIAMVVMPDHLHAIWQLPPGDSDYPMCWSLIK
AGFSRGIAKTERIRESRLRKRERGIWQRRYWEHLIRDDKDLQAHVDYIHFNPVKHGYCDKPVDWPYSSIHRHIAAGWIES
DWTINSDSDRE
>Mature_171_residues
MRYRRATTIGACWFFTVNLADRKQDLLVRHIDLLREVLRHVKQQHPFEIIAMVVMPDHLHAIWQLPPGDSDYPMCWSLIK
AGFSRGIAKTERIRESRLRKRERGIWQRRYWEHLIRDDKDLQAHVDYIHFNPVKHGYCDKPVDWPYSSIHRHIAAGWIES
DWTINSDSDRE

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yafM [H]

Homologues:

Organism=Escherichia coli, GI1786422, Length=161, Percent_Identity=44.0993788819876, Blast_Score=142, Evalue=8e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002686 [H]

Pfam domain/function: PF01797 Transposase_17 [H]

EC number: NA

Molecular weight: Translated: 20553; Mature: 20553

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYRRATTIGACWFFTVNLADRKQDLLVRHIDLLREVLRHVKQQHPFEIIAMVVMPDHLH
CCCCCCCCCEEHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHH
AIWQLPPGDSDYPMCWSLIKAGFSRGIAKTERIRESRLRKRERGIWQRRYWEHLIRDDKD
HHEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LQAHVDYIHFNPVKHGYCDKPVDWPYSSIHRHIAAGWIESDWTINSDSDRE
HHHHHCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCC
>Mature Secondary Structure
MRYRRATTIGACWFFTVNLADRKQDLLVRHIDLLREVLRHVKQQHPFEIIAMVVMPDHLH
CCCCCCCCCEEHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHH
AIWQLPPGDSDYPMCWSLIKAGFSRGIAKTERIRESRLRKRERGIWQRRYWEHLIRDDKD
HHEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LQAHVDYIHFNPVKHGYCDKPVDWPYSSIHRHIAAGWIESDWTINSDSDRE
HHHHHCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]