| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is puuP [H]
Identifier: 145299930
GI number: 145299930
Start: 3256186
End: 3257511
Strand: Direct
Name: puuP [H]
Synonym: ASA_3022
Alternate gene names: 145299930
Gene position: 3256186-3257511 (Clockwise)
Preceding gene: 145299929
Following gene: 145299931
Centisome position: 69.25
GC content: 59.73
Gene sequence:
>1326_bases ATGGCTCAACGCCCGGCTCGATTGAAGCAAACCCTGACCCTGTGGCAAGTGGTGGTGATGGGATTGGCCTATATGACCCC CATGGTGGTGTTCGATACCTTTGGCATCGTCACCGACATCACTCAGGGCCATGTGACTACCGCCTACCTGCTGGCCCTGG TGGGCGTGCTGTTCACCGCCACCAGCTATAGCCAGATGGTGCGCCACTATCCGGTTGCCGGCTCCGCCTATACCTATGCC CAGAAGGAGTTCTCCCCCGTGGTGGGCTTCATGGTGGGCTGGTCATCCCTGCTCGACTACATGTTCCTGCCGATGATCAA CATGCTGCTGGCCAAGATCTATCTGACCGCCCTGTTTCCCGGCATCGAACCCTGGATCTTCATCTGCGCCATGACGGCAC TGATGACCCTCATCAACCTGCGCGGCATCGATCTGGTGGCCAACCTCAACGGCGTCATCATCTTGATCCAGATCGCCATC ATGGTGGTGTTTCTGGCCCTGATCGGATACGGCATCGCTCAGGGTGAAGGGCTCGGCACCGTCAGCCTGCAGCCCATCTA CACCGCCGACACAGAAGTGTTGCCACTGCTGACCGGCGCCACCATCCTCTGTTTCTCCTTTCTGGGATTTGACAGCCTGA GCGCCCTCAGTGAAGAGACCCCCAACGCCGGCAAGGTGATCCCCAAGGCCATCTTCCTGACGGCCTTGCTGGGCGGCCTC ATCTTCGTGGTGGTGGCCTATGCCCTGCAGCTCTACTTCCCGGATGCCTCCCGCTTCAAGGAGCCGGATGCCGTGCTGCC CGAGATTGCCCTCTATGTGGGCGGCAAGCTGTTCCAGAGCGTGGTGCTGGTCTGTGCCTGCGTGGCCGTGCTGGCGTCGG GACTCTCCTCCCACGCTGGTGTCTCCCGCATCCTCTACGTGATGGGGCGGGACAAGGTGCTGCCCCAGCGCACCTTCGGC TATATCCACCCCAAGTGGCAGACACCCGTGTTCAATATCCTGCTGGTGGGCATACTGGCGCTGTCGGCCATCAGCTTCGA TCTGGAAATCGCCCTGGCCCTGATCAACTTCGGTGCCCTGGTGGCCTTTACCGTGGTCAATTTGTCGGTGATCGCCTGCT ATTACGTGCGTCAGGGGCGCAACAAGACCCTCAGGGATCACCTGCAATATCTGGTGCTGCCCCTGTGCGGGGCGGGGACT GTCGCGATTCTCTGGCTCAATCTCGAACTAACCTCTCTTATCCTCGGCATTATCTGGGCTGCCATAGGGGGAATTTATCT GTTTTTGCGTACCACCTTCTGGCGCGTATCCTTGCCGACCTATTGA
Upstream 100 bases:
>100_bases ACAGGCGCGCTGGGCTCCCTCCAAGGCCAGCCACACTGTCACGCGTCCTTCGCCTGCCTGCGGCGCGGGACATACGCCCC AAATTCGAGGAGAGAGGCCA
Downstream 100 bases:
>100_bases GCTGAAAGCCTTGCCAACACTGGGCTGGCGCCGATCTCCCCCGAACGGGTGACGGCGCCATTTATTGATATAAAACAGGT CATTGATAATTCTCTTGCCC
Product: amino acid permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MAQRPARLKQTLTLWQVVVMGLAYMTPMVVFDTFGIVTDITQGHVTTAYLLALVGVLFTATSYSQMVRHYPVAGSAYTYA QKEFSPVVGFMVGWSSLLDYMFLPMINMLLAKIYLTALFPGIEPWIFICAMTALMTLINLRGIDLVANLNGVIILIQIAI MVVFLALIGYGIAQGEGLGTVSLQPIYTADTEVLPLLTGATILCFSFLGFDSLSALSEETPNAGKVIPKAIFLTALLGGL IFVVVAYALQLYFPDASRFKEPDAVLPEIALYVGGKLFQSVVLVCACVAVLASGLSSHAGVSRILYVMGRDKVLPQRTFG YIHPKWQTPVFNILLVGILALSAISFDLEIALALINFGALVAFTVVNLSVIACYYVRQGRNKTLRDHLQYLVLPLCGAGT VAILWLNLELTSLILGIIWAAIGGIYLFLRTTFWRVSLPTY
Sequences:
>Translated_441_residues MAQRPARLKQTLTLWQVVVMGLAYMTPMVVFDTFGIVTDITQGHVTTAYLLALVGVLFTATSYSQMVRHYPVAGSAYTYA QKEFSPVVGFMVGWSSLLDYMFLPMINMLLAKIYLTALFPGIEPWIFICAMTALMTLINLRGIDLVANLNGVIILIQIAI MVVFLALIGYGIAQGEGLGTVSLQPIYTADTEVLPLLTGATILCFSFLGFDSLSALSEETPNAGKVIPKAIFLTALLGGL IFVVVAYALQLYFPDASRFKEPDAVLPEIALYVGGKLFQSVVLVCACVAVLASGLSSHAGVSRILYVMGRDKVLPQRTFG YIHPKWQTPVFNILLVGILALSAISFDLEIALALINFGALVAFTVVNLSVIACYYVRQGRNKTLRDHLQYLVLPLCGAGT VAILWLNLELTSLILGIIWAAIGGIYLFLRTTFWRVSLPTY >Mature_440_residues AQRPARLKQTLTLWQVVVMGLAYMTPMVVFDTFGIVTDITQGHVTTAYLLALVGVLFTATSYSQMVRHYPVAGSAYTYAQ KEFSPVVGFMVGWSSLLDYMFLPMINMLLAKIYLTALFPGIEPWIFICAMTALMTLINLRGIDLVANLNGVIILIQIAIM VVFLALIGYGIAQGEGLGTVSLQPIYTADTEVLPLLTGATILCFSFLGFDSLSALSEETPNAGKVIPKAIFLTALLGGLI FVVVAYALQLYFPDASRFKEPDAVLPEIALYVGGKLFQSVVLVCACVAVLASGLSSHAGVSRILYVMGRDKVLPQRTFGY IHPKWQTPVFNILLVGILALSAISFDLEIALALINFGALVAFTVVNLSVIACYYVRQGRNKTLRDHLQYLVLPLCGAGTV AILWLNLELTSLILGIIWAAIGGIYLFLRTTFWRVSLPTY
Specific function: Imports putrescine [H]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]
Homologues:
Organism=Homo sapiens, GI4507047, Length=421, Percent_Identity=23.2779097387173, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI114326544, Length=223, Percent_Identity=29.5964125560538, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI114326550, Length=223, Percent_Identity=29.5964125560538, Blast_Score=76, Evalue=5e-14, Organism=Escherichia coli, GI87081869, Length=431, Percent_Identity=62.877030162413, Blast_Score=573, Evalue=1e-164, Organism=Escherichia coli, GI87082023, Length=436, Percent_Identity=61.4678899082569, Blast_Score=546, Evalue=1e-157, Organism=Escherichia coli, GI87082250, Length=350, Percent_Identity=25.4285714285714, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1786789, Length=174, Percent_Identity=25.8620689655172, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1788480, Length=363, Percent_Identity=23.1404958677686, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17532491, Length=425, Percent_Identity=23.2941176470588, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17533459, Length=398, Percent_Identity=22.8643216080402, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17531343, Length=398, Percent_Identity=22.8643216080402, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24668806, Length=410, Percent_Identity=25.1219512195122, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI21356285, Length=410, Percent_Identity=25.1219512195122, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI24668802, Length=410, Percent_Identity=25.1219512195122, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI24667468, Length=405, Percent_Identity=25.1851851851852, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI24666159, Length=407, Percent_Identity=22.3587223587224, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI221512776, Length=407, Percent_Identity=22.3587223587224, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI281366235, Length=182, Percent_Identity=32.4175824175824, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI116007820, Length=182, Percent_Identity=32.4175824175824, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 48094; Mature: 47963
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQRPARLKQTLTLWQVVVMGLAYMTPMVVFDTFGIVTDITQGHVTTAYLLALVGVLFTA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH TSYSQMVRHYPVAGSAYTYAQKEFSPVVGFMVGWSSLLDYMFLPMINMLLAKIYLTALFP HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GIEPWIFICAMTALMTLINLRGIDLVANLNGVIILIQIAIMVVFLALIGYGIAQGEGLGT CCHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCE VSLQPIYTADTEVLPLLTGATILCFSFLGFDSLSALSEETPNAGKVIPKAIFLTALLGGL EEECEEECCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH IFVVVAYALQLYFPDASRFKEPDAVLPEIALYVGGKLFQSVVLVCACVAVLASGLSSHAG HHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH VSRILYVMGRDKVLPQRTFGYIHPKWQTPVFNILLVGILALSAISFDLEIALALINFGAL HHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAFTVVNLSVIACYYVRQGRNKTLRDHLQYLVLPLCGAGTVAILWLNLELTSLILGIIWA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHH AIGGIYLFLRTTFWRVSLPTY HHHHHHHHHHHHHHEEECCCC >Mature Secondary Structure AQRPARLKQTLTLWQVVVMGLAYMTPMVVFDTFGIVTDITQGHVTTAYLLALVGVLFTA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH TSYSQMVRHYPVAGSAYTYAQKEFSPVVGFMVGWSSLLDYMFLPMINMLLAKIYLTALFP HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GIEPWIFICAMTALMTLINLRGIDLVANLNGVIILIQIAIMVVFLALIGYGIAQGEGLGT CCHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCE VSLQPIYTADTEVLPLLTGATILCFSFLGFDSLSALSEETPNAGKVIPKAIFLTALLGGL EEECEEECCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH IFVVVAYALQLYFPDASRFKEPDAVLPEIALYVGGKLFQSVVLVCACVAVLASGLSSHAG HHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH VSRILYVMGRDKVLPQRTFGYIHPKWQTPVFNILLVGILALSAISFDLEIALALINFGAL HHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAFTVVNLSVIACYYVRQGRNKTLRDHLQYLVLPLCGAGTVAILWLNLELTSLILGIIWA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHH AIGGIYLFLRTTFWRVSLPTY HHHHHHHHHHHHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]