Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
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Accession | NC_009348 |
Length | 4,702,402 |
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The map label for this gene is 145299920
Identifier: 145299920
GI number: 145299920
Start: 3247485
End: 3247985
Strand: Direct
Name: 145299920
Synonym: ASA_3012
Alternate gene names: NA
Gene position: 3247485-3247985 (Clockwise)
Preceding gene: 145299916
Following gene: 145299923
Centisome position: 69.06
GC content: 57.49
Gene sequence:
>501_bases ATGGATAACAAGCAGATAGAAGGTAACATCTTTGTTCCGGCCCATATCGACGATGTCTGGCGTGCCTGGACAACCGAGAG CGGCCTGCGCAGCTTCCTGGCGCCGGAATGCCTGATGGTGCCCGAACCGAATGGTCCCTTCGAGATCTATTTCAGGCCCG ATGCCCCGCTGGGTGAACGTGGTAGCGAAGGCTGTCGGGTGATGGCCGTCATGCCCCACGACCTGCTCAGCTTCAGCTGG AACTTTCCGCCCTCCCTGCCCCATATTCGGCTGCAAAAAACTCAGGTCAGCCTGCGTTTTGTGCCTGAAGGTCAGGGTAC TCGCCTCTACTTCCAGCAAAGCGGCTGGGCAAACGATCCTGACTGGGATCAAGGTTATGCCTATTTTCGGGAAGAGTGGC TGGAAACCAGCCTGCCCCGCCTGCAGTATCGCTTCACCCACGGCCCCATCGACTGGAATAACCCGCCGGACAAGCAGCAA CTGAAATCACTGGCTCAATAA
Upstream 100 bases:
>100_bases CGACCGATGGCACGGGTGTGACACACCTCTGTCCATTTTATCGCCCATGGGGCTATACTGCCTGAGTCCCATGTATGGAT GGTTTGAGGCTCGCTGATTT
Downstream 100 bases:
>100_bases GCCTCCATATCAAAACACCGCCAGCTGGCGGTGTTTTTTATATTCAATTAGCGGCAGTTCAACGCGGGTTTGTCATCCAG CAGCCAAGAAACCCAGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MDNKQIEGNIFVPAHIDDVWRAWTTESGLRSFLAPECLMVPEPNGPFEIYFRPDAPLGERGSEGCRVMAVMPHDLLSFSW NFPPSLPHIRLQKTQVSLRFVPEGQGTRLYFQQSGWANDPDWDQGYAYFREEWLETSLPRLQYRFTHGPIDWNNPPDKQQ LKSLAQ
Sequences:
>Translated_166_residues MDNKQIEGNIFVPAHIDDVWRAWTTESGLRSFLAPECLMVPEPNGPFEIYFRPDAPLGERGSEGCRVMAVMPHDLLSFSW NFPPSLPHIRLQKTQVSLRFVPEGQGTRLYFQQSGWANDPDWDQGYAYFREEWLETSLPRLQYRFTHGPIDWNNPPDKQQ LKSLAQ >Mature_166_residues MDNKQIEGNIFVPAHIDDVWRAWTTESGLRSFLAPECLMVPEPNGPFEIYFRPDAPLGERGSEGCRVMAVMPHDLLSFSW NFPPSLPHIRLQKTQVSLRFVPEGQGTRLYFQQSGWANDPDWDQGYAYFREEWLETSLPRLQYRFTHGPIDWNNPPDKQQ LKSLAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19294; Mature: 19294
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNKQIEGNIFVPAHIDDVWRAWTTESGLRSFLAPECLMVPEPNGPFEIYFRPDAPLGER CCCCCCCCCEEEECCHHHHHHHHCCHHHHHHHHCCCEEEECCCCCCEEEEECCCCCCCCC GSEGCRVMAVMPHDLLSFSWNFPPSLPHIRLQKTQVSLRFVPEGQGTRLYFQQSGWANDP CCCCCEEEEECCCCCEEECCCCCCCCCCEEEEEEEEEEEEECCCCCCEEEEECCCCCCCC DWDQGYAYFREEWLETSLPRLQYRFTHGPIDWNNPPDKQQLKSLAQ CCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure MDNKQIEGNIFVPAHIDDVWRAWTTESGLRSFLAPECLMVPEPNGPFEIYFRPDAPLGER CCCCCCCCCEEEECCHHHHHHHHCCHHHHHHHHCCCEEEECCCCCCEEEEECCCCCCCCC GSEGCRVMAVMPHDLLSFSWNFPPSLPHIRLQKTQVSLRFVPEGQGTRLYFQQSGWANDP CCCCCEEEEECCCCCEEECCCCCCCCCCEEEEEEEEEEEEECCCCCCEEEEECCCCCCCC DWDQGYAYFREEWLETSLPRLQYRFTHGPIDWNNPPDKQQLKSLAQ CCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA