Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
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Accession | NC_009348 |
Length | 4,702,402 |
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The map label for this gene is 145299896
Identifier: 145299896
GI number: 145299896
Start: 3219658
End: 3220032
Strand: Direct
Name: 145299896
Synonym: ASA_2988
Alternate gene names: NA
Gene position: 3219658-3220032 (Clockwise)
Preceding gene: 145299895
Following gene: 145299897
Centisome position: 68.47
GC content: 64.53
Gene sequence:
>375_bases ATGCGTTTTATTTCAACCAAATCTGGGTCCACCCAGGCTCACCCCCTGCTGAGCAAACTGGGCCGTGGCCTGCTGCCACT CTGGCTGCGCACCAAGCCGAGTCAGCACCACTACCGTTTGCAGATCCGCTGCCAGGATCGCGCCGACATGGAGCAGGTAC TCGACATGGTGAGCCACACACTGCAACCAGCCGGGCTGCATCCCATGCAGTCCCTGAGACCAGGGCGCAGTGGTGGTCGG GAGCTGGTGCTCAACCTGCACTGCACCCCGCCCCAGCGCCGGTATCTGGTGCAGTTCGTGCACCAGGTCGGGGTAGCCCA CCCGGTACGCTGGGAGCTGCGCCCCCGGCGTGATGCCGAGCCAGTGCTCAACTGA
Upstream 100 bases:
>100_bases TCCCCTCTTCTCTGTTTTTACACTTGACGTCAGGTGACTCGTGGTCAATGGCCCAGGACACCTTGCCTGCATAGTTTCTG CTTCCCACAAGGAGGCTGCT
Downstream 100 bases:
>100_bases CATCTATCAGGTGATATCCGGGGCCAGCCATGCTGGCCCTTCTCTATTGATCCGACACCTTGCCCGTCGCCTTTCATTGA GCGCCTGAGCATCCAGGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MRFISTKSGSTQAHPLLSKLGRGLLPLWLRTKPSQHHYRLQIRCQDRADMEQVLDMVSHTLQPAGLHPMQSLRPGRSGGR ELVLNLHCTPPQRRYLVQFVHQVGVAHPVRWELRPRRDAEPVLN
Sequences:
>Translated_124_residues MRFISTKSGSTQAHPLLSKLGRGLLPLWLRTKPSQHHYRLQIRCQDRADMEQVLDMVSHTLQPAGLHPMQSLRPGRSGGR ELVLNLHCTPPQRRYLVQFVHQVGVAHPVRWELRPRRDAEPVLN >Mature_124_residues MRFISTKSGSTQAHPLLSKLGRGLLPLWLRTKPSQHHYRLQIRCQDRADMEQVLDMVSHTLQPAGLHPMQSLRPGRSGGR ELVLNLHCTPPQRRYLVQFVHQVGVAHPVRWELRPRRDAEPVLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14291; Mature: 14291
Theoretical pI: Translated: 11.77; Mature: 11.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFISTKSGSTQAHPLLSKLGRGLLPLWLRTKPSQHHYRLQIRCQDRADMEQVLDMVSHT CCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHH LQPAGLHPMQSLRPGRSGGRELVLNLHCTPPQRRYLVQFVHQVGVAHPVRWELRPRRDAE CCCCCCCCHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCC PVLN CCCC >Mature Secondary Structure MRFISTKSGSTQAHPLLSKLGRGLLPLWLRTKPSQHHYRLQIRCQDRADMEQVLDMVSHT CCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHH LQPAGLHPMQSLRPGRSGGRELVLNLHCTPPQRRYLVQFVHQVGVAHPVRWELRPRRDAE CCCCCCCCHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCC PVLN CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA