| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145299846
Identifier: 145299846
GI number: 145299846
Start: 3154646
End: 3155548
Strand: Direct
Name: 145299846
Synonym: ASA_2935
Alternate gene names: NA
Gene position: 3154646-3155548 (Clockwise)
Preceding gene: 145299845
Following gene: 145299847
Centisome position: 67.09
GC content: 55.37
Gene sequence:
>1163_bases ATGACAAGATTGCGTCGCTCATTTACTGCCGAGTTCAAACTGGAAGCCGCATCCCTGGTGGTCGACCAGGGGTATTCAGT CCCCGAAGCCAGCCGTTCGCTGGATGTCGGTGAAACCGTACTTCGCCGCTGGGTTCAGCAGCTTCAATCCGAACGCTGTG GCACTACCCCAATCAGCAAAGCGCTGACTCCGGAGCAGCAGAAAATCCAGGAGCTGGAAGCCCGTATCAACCGGCTCGAG CGCGAAAAGGACATACTAAAAAAGGCTACTGCTCTCTTGATGGCGGACGAGTTCACACGTACGCGCTGATAGACCGATTA AGGGAGCAAGCCCCCATCACCTTGGTCTGCTGCGCTTTTGATGTTCCCAAGTCCTGTTTTTACGACTATTTAGCCCGCAA GCGGACGATTAACCGTGAGCGGATGAAACAACGAAGCGAGTTGCGCCGTTTGTTCAAAGAGAGCCGGGATTCCGCAGGCA GCCGCGCCTTGATGTCGATGATGCGAGAGCTGGGGTATCAGATTGGCCGATTCAAAGTCCGTAACCTGATGAAGGAAGCT GGGCTGGCGTCCAAACAGCCGGGCGCACACCGTTATAAGGTTGCATGCTCTGAACGACCGGATATTCCGAATCTGCTGGC CCGCGAATTTGATGTTCCGCAACCCAATCAGGTGTGGTGTGGCGATATCACCTATGTCTGGACAAGTGCTCGTTGGCATT ACTTAGCAGTGGTGCTTGACCTTCATACCCGGCGAGTCGTGGGCTGGGCGATGTCTGACAAGCCTGATGCAGAGCTGGCA ATCAAAGCACTGGAGATGGCCTATCAGCAGCGGGGTTGCCCATCCGGTGTGCTGTTTCACTCCGACCAGGGCAGTCAATA TGGCAGCCGGGCATTTCGGCAACGGTTGTGGCGCTATCGCATGACCCAGAGTATGAGCCGGCGTGGAAACTGCTGGGATA ACGCCCCGATGGAGCGGTTGTTCAGAAGCCTGAAGTCAGAGTGGCTTCCTGCGACGGGATACGTGAGCCTGCGGGAAGCG AAGCGGGATATCAGTTATTACCTGATGGATTACTACAACTGGCGGCGTCCACATCAACACAATGACGGGATACCGCCAGC AGAGGCCGAGGATCGGCCTAATCAAGTGTCCGGATTTAGTTGA
Upstream 100 bases:
>100_bases ATAGGCCAGCTCATGAAGGCAGTCGCTCAGGGTGTAGTGGTCTAATCATCCCGGACACCATTTTAGGTGGTAGAGTCGCC ACCATAATCTGAGGTGTTCA
Downstream 100 bases:
>100_bases CCACTACACGGTGTGTGGCATCAGTTCAGGCACAGCCTTGAACCGCTCCGCCACCTGTTTAGGCGGTAGTTGCCAACTGT CTTGCTCCAACCCTCTCAGT
Product: IS3 family transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>387_residues MTRLRRSFTAEFKLEAASLVVDQGYSVPEASRSLDVGETVLRRWVQQLQSERCGTTPISKALTPEQQKIQELEARINRLE REKDILKKGYCSLDGGRVHTYALIDRLREQAPITLVCCAFDVPKSCFYDYLARKRTINRERMKQRSELRRLFKESRDSAG SRALMSMMRELGYQIGRFKVRNLMKEAGLASKQPGAHRYKVACSERPDIPNLLAREFDVPQPNQVWCGDITYVWTSARWH YLAVVLDLHTRRVVGWAMSDKPDAELAIKALEMAYQQRGCPSGVLFHSDQGSQYGSRAFRQRLWRYRMTQSMSRRGNCWD NAPMERLFRSLKSEWLPATGYVSLREAKRDISYYLMDYYNWRRPHQHNDGIPPAEAEDRPNQVSGFS
Sequences:
>Translated_301_residues STKSGHLIRPILGLCWRYPVIVLMWTPPVVVIHQVITDIPLRFPQAHVSRRRKPL*LQASEQPLHRGVIPAVSTPAHTLG HAIAPQPLPKCPAAILTALVGVKQHTGWATPLLIGHLQCFDCQLCIRLVRHRPAHDSPGMKVKHHC*VMPTSTCPDIGDI ATPHLIGLRNIKFAGQQIRNIRSFRACNLITVCARLFGRQPSFLHQVTDFESANLIPQLSHHRHQGAAACGIPALFEQTA QLASLFHPLTVNRPLAG*IVVKTGLGNIKSAADQGDGGLLP*SVYQRVRVNSSAIKRAVAF >Mature_301_residues STKSGHLIRPILGLCWRYPVIVLMWTPPVVVIHQVITDIPLRFPQAHVSRRRKPL*LQASEQPLHRGVIPAVSTPAHTLG HAIAPQPLPKCPAAILTALVGVKQHTGWATPLLIGHLQCFDCQLCIRLVRHRPAHDSPGMKVKHHC*VMPTSTCPDIGDI ATPHLIGLRNIKFAGQQIRNIRSFRACNLITVCARLFGRQPSFLHQVTDFESANLIPQLSHHRHQGAAACGIPALFEQTA QLASLFHPLTVNRPLAG*IVVKTGLGNIKSAADQGDGGLLP*SVYQRVRVNSSAIKRAVAF
Specific function: Unknown
COG id: COG2801
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32343; Mature: 32343
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure STKSGHLIRPILGLCWRYPVIVLMWTPPVVVIHQVITDIPLRFPQAHVSRRRKPLLQASE CCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC QPLHRGVIPAVSTPAHTLGHAIAPQPLPKCPAAILTALVGVKQHTGWATPLLIGHLQCFD CHHHHCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH CQLCIRLVRHRPAHDSPGMKVKHHCVMPTSTCPDIGDIATPHLIGLRNIKFAGQQIRNIR HHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHH SFRACNLITVCARLFGRQPSFLHQVTDFESANLIPQLSHHRHQGAAACGIPALFEQTAQL HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCHHCCCHHHHHHHHHH ASLFHPLTVNRPLAGIVVKTGLGNIKSAADQGDGGLLPSVYQRVRVNSSAIKRAVAF HHHHCCCCCCCCHHHEEEECCCCCHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA