Definition Aeromonas salmonicida subsp. salmonicida A449, complete genome.
Accession NC_009348
Length 4,702,402

Click here to switch to the map view.

The map label for this gene is 145299842

Identifier: 145299842

GI number: 145299842

Start: 3150626

End: 3151237

Strand: Direct

Name: 145299842

Synonym: ASA_2930

Alternate gene names: NA

Gene position: 3150626-3151237 (Clockwise)

Preceding gene: 145299841

Following gene: 145299843

Centisome position: 67.0

GC content: 57.68

Gene sequence:

>612_bases
ATGCAAAACGCACACTATGGGAGCATTGCCCAGAGCCAAGCTTTGCCATCAGATAGACCGTCAAATAAGCGACTACAGCC
AAATTTTGCGATTGGCTTGCCCGATAACAGCCAAGAGGGTACGATTCTTTCTGCAACGGCAAAATCCGTTGCCGAGATTG
GCGTCTCGCAAAGAATCTTGGAGCCGACCCACGCTCTTGCGTGGTTTTTTGTCGGTGCTCGTTCCTCATTTCTTGGGGCG
TTGCTCGCCTACCCGGTCAGCAGCCTCTACAGCGTTATGGCGGTTCGGGTGAGGGCCCCGCAAGGGGCGCTGGACTCCAA
GGTCTCCAGTTACGCCAACCTCGTCCGGGCTGCCACCAGAAGATTGGCGTCTCTCTGTGGCAGTAACAAGCGACTGACCT
TGGAGGCTGCCATCATGGCTACTGTCCCCACCCCTGCTACATCCAAAATCTTCACTTTCCTGATTGCCTCAAACTCCTGC
CGGCTGGCAGACCTGAGCCGTATCCGCACCATTTCCGCCATGGCTGACACCGAAGTCCAAGCCCGCGCCGCCCTGGCAGG
TTTGCCGTTGGTGTTTGTCAGCCGCCGTCCGTCTGGGGAGGTGGCCGCATGA

Upstream 100 bases:

>100_bases
GAGCGACGCAAAGTAGCTCTCTATGTGCTGAAGCACCCTGAATGGCCTCATCCCGACTTCTCCCGGGATGATCTACCACC
AGCCGCTTAAGGAATACAGC

Downstream 100 bases:

>100_bases
ACCCGACCCATTCCCCCCGCCTAGCTGAACTGCTGGCGCAACTGGCCGTACTGCTGGAAGAGACCGACCTGAGCCCGCTG
GATCGCCACCGCTATGGCCG

Product: phage regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MQNAHYGSIAQSQALPSDRPSNKRLQPNFAIGLPDNSQEGTILSATAKSVAEIGVSQRILEPTHALAWFFVGARSSFLGA
LLAYPVSSLYSVMAVRVRAPQGALDSKVSSYANLVRAATRRLASLCGSNKRLTLEAAIMATVPTPATSKIFTFLIASNSC
RLADLSRIRTISAMADTEVQARAALAGLPLVFVSRRPSGEVAA

Sequences:

>Translated_203_residues
MQNAHYGSIAQSQALPSDRPSNKRLQPNFAIGLPDNSQEGTILSATAKSVAEIGVSQRILEPTHALAWFFVGARSSFLGA
LLAYPVSSLYSVMAVRVRAPQGALDSKVSSYANLVRAATRRLASLCGSNKRLTLEAAIMATVPTPATSKIFTFLIASNSC
RLADLSRIRTISAMADTEVQARAALAGLPLVFVSRRPSGEVAA
>Mature_203_residues
MQNAHYGSIAQSQALPSDRPSNKRLQPNFAIGLPDNSQEGTILSATAKSVAEIGVSQRILEPTHALAWFFVGARSSFLGA
LLAYPVSSLYSVMAVRVRAPQGALDSKVSSYANLVRAATRRLASLCGSNKRLTLEAAIMATVPTPATSKIFTFLIASNSC
RLADLSRIRTISAMADTEVQARAALAGLPLVFVSRRPSGEVAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21489; Mature: 21489

Theoretical pI: Translated: 10.98; Mature: 10.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNAHYGSIAQSQALPSDRPSNKRLQPNFAIGLPDNSQEGTILSATAKSVAEIGVSQRIL
CCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHH
EPTHALAWFFVGARSSFLGALLAYPVSSLYSVMAVRVRAPQGALDSKVSSYANLVRAATR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RLASLCGSNKRLTLEAAIMATVPTPATSKIFTFLIASNSCRLADLSRIRTISAMADTEVQ
HHHHHHCCCCEEEEEEEEEEECCCCCHHHHEEEEHCCCCCCHHHHHHHHHHHHHHCCHHH
ARAALAGLPLVFVSRRPSGEVAA
HHHHHHCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MQNAHYGSIAQSQALPSDRPSNKRLQPNFAIGLPDNSQEGTILSATAKSVAEIGVSQRIL
CCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHH
EPTHALAWFFVGARSSFLGALLAYPVSSLYSVMAVRVRAPQGALDSKVSSYANLVRAATR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RLASLCGSNKRLTLEAAIMATVPTPATSKIFTFLIASNSCRLADLSRIRTISAMADTEVQ
HHHHHHCCCCEEEEEEEEEEECCCCCHHHHEEEEHCCCCCCHHHHHHHHHHHHHHCCHHH
ARAALAGLPLVFVSRRPSGEVAA
HHHHHHCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA