Definition Aeromonas salmonicida subsp. salmonicida A449, complete genome.
Accession NC_009348
Length 4,702,402

Click here to switch to the map view.

The map label for this gene is 145299803

Identifier: 145299803

GI number: 145299803

Start: 3109874

End: 3110245

Strand: Direct

Name: 145299803

Synonym: ASA_2884

Alternate gene names: NA

Gene position: 3109874-3110245 (Clockwise)

Preceding gene: 145299802

Following gene: 145299804

Centisome position: 66.13

GC content: 58.6

Gene sequence:

>372_bases
GTGAACTGGCCAAGATGCCCATCGACATACAGCGACCATTTCGCGCCGGAGAGAGTTATGACAAACCAAGCCACTGCAGG
CACCACAACCTGCGACTACAAGCTATGGGACATCCTCGTCGAGTCAGCAAAGGAACGCACTACCATTCGTTACTCCAAAC
TGGCCAGGCAGGCCGGGCTGGAGAATAGCCAGGATGAGCTGCGCACCCTGCTGCAACGCATCCGCATGTACTGCACCGAA
CACCAGTTGCCGATCCTCTCCACCATAGTGGTGGACGATGTGGGCAAATACACCGGCCTCTCCTCCGGCCTGCCGGACGC
TCCTTGGGAGCGTGCCAGGGTGTTTGACTACCAATGGCCTGTTGCCCCCTGA

Upstream 100 bases:

>100_bases
AATGGAAATTTAAACTAATAGCAAAGCTTTAGAATCCCTTTGCCAAGCATTCTGGCGAGGAACCTCAGGCTTTTTTGCTC
TGGATCAACGTCAGGGGCCA

Downstream 100 bases:

>100_bases
TCCAGACATTCATCACCATAACGCGCCCGCTGGCGCGTTTTGTACTTCTTCGGGCCCGCTTTCCTGAAGCGCAGGCAAAA
AAAAACCGCCTCAAAGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MNWPRCPSTYSDHFAPERVMTNQATAGTTTCDYKLWDILVESAKERTTIRYSKLARQAGLENSQDELRTLLQRIRMYCTE
HQLPILSTIVVDDVGKYTGLSSGLPDAPWERARVFDYQWPVAP

Sequences:

>Translated_123_residues
MNWPRCPSTYSDHFAPERVMTNQATAGTTTCDYKLWDILVESAKERTTIRYSKLARQAGLENSQDELRTLLQRIRMYCTE
HQLPILSTIVVDDVGKYTGLSSGLPDAPWERARVFDYQWPVAP
>Mature_123_residues
MNWPRCPSTYSDHFAPERVMTNQATAGTTTCDYKLWDILVESAKERTTIRYSKLARQAGLENSQDELRTLLQRIRMYCTE
HQLPILSTIVVDDVGKYTGLSSGLPDAPWERARVFDYQWPVAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14140; Mature: 14140

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWPRCPSTYSDHFAPERVMTNQATAGTTTCDYKLWDILVESAKERTTIRYSKLARQAGL
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ENSQDELRTLLQRIRMYCTEHQLPILSTIVVDDVGKYTGLSSGLPDAPWERARVFDYQWP
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCC
VAP
CCC
>Mature Secondary Structure
MNWPRCPSTYSDHFAPERVMTNQATAGTTTCDYKLWDILVESAKERTTIRYSKLARQAGL
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ENSQDELRTLLQRIRMYCTEHQLPILSTIVVDDVGKYTGLSSGLPDAPWERARVFDYQWP
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCC
VAP
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA