| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145299779
Identifier: 145299779
GI number: 145299779
Start: 3079764
End: 3080282
Strand: Direct
Name: 145299779
Synonym: ASA_2859
Alternate gene names: NA
Gene position: 3079764-3080282 (Clockwise)
Preceding gene: 145299778
Following gene: 145299780
Centisome position: 65.49
GC content: 65.32
Gene sequence:
>519_bases ATGCAAAACCGGACGCTTGAATCCCTGGCGGCCCTTGGCCGCCGTCTCTGGATAGCCACCCTGCTCTGGGTCATAGGGCG CACCCTGTGCCGCGCCGCCCGGGTCGATGAGGCGGTGCGGCATGAACTCGCCCCCCTGCCCGACGGCCTCACCATACGGC TGGAGGTAGCGGGCCTCACCCAGGCGCTGATCATCCATAAAGCAGCTGGTCGCTGGCAGTGTGGCGTACCGACACATCCC AGCAGCGATCTGCACCCGCTGCGGGTGCGCTTCAAACATCCGGGTATCGCCTTTCGCGCCCTCAGCTTTCGGCTCGGTGT CAATCAGGCGTTCAGTGAAAACCGCCTGCTGGTGGAAGGGGATCTCACCGTCGCCATGCACCTGGTACGGGCACTGGAGC AGTTGCAGGCCCTGATCCTGCCCGCCTTCATAGCGCGGCCGCTGCTGCGCCACTATCCGAACCCGCGCAACAAGCTGACG CGTGCCTGCCACATCTACCTGGGTCTGCTGACCGGCTGA
Upstream 100 bases:
>100_bases GCCTCCCTGTTTGTCGATCAACCTGAACTGGGGCAGGATGCCCACTGGCAAGCCAGTGCCTTCGCCCTCTTCTGGTCTGC CATCTCGGGAGTGAATCCTC
Downstream 100 bases:
>100_bases ATAAAAGGATGAACAACATGAGTCGCTATTACGATTTCTTCTGTCCGGTCAAACTGATAGCGGGCGAGCAGGCGCTGGAA CAGCTGGCTGGCGAATTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MQNRTLESLAALGRRLWIATLLWVIGRTLCRAARVDEAVRHELAPLPDGLTIRLEVAGLTQALIIHKAAGRWQCGVPTHP SSDLHPLRVRFKHPGIAFRALSFRLGVNQAFSENRLLVEGDLTVAMHLVRALEQLQALILPAFIARPLLRHYPNPRNKLT RACHIYLGLLTG
Sequences:
>Translated_172_residues MQNRTLESLAALGRRLWIATLLWVIGRTLCRAARVDEAVRHELAPLPDGLTIRLEVAGLTQALIIHKAAGRWQCGVPTHP SSDLHPLRVRFKHPGIAFRALSFRLGVNQAFSENRLLVEGDLTVAMHLVRALEQLQALILPAFIARPLLRHYPNPRNKLT RACHIYLGLLTG >Mature_172_residues MQNRTLESLAALGRRLWIATLLWVIGRTLCRAARVDEAVRHELAPLPDGLTIRLEVAGLTQALIIHKAAGRWQCGVPTHP SSDLHPLRVRFKHPGIAFRALSFRLGVNQAFSENRLLVEGDLTVAMHLVRALEQLQALILPAFIARPLLRHYPNPRNKLT RACHIYLGLLTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19247; Mature: 19247
Theoretical pI: Translated: 11.66; Mature: 11.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNRTLESLAALGRRLWIATLLWVIGRTLCRAARVDEAVRHELAPLPDGLTIRLEVAGLT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHH QALIIHKAAGRWQCGVPTHPSSDLHPLRVRFKHPGIAFRALSFRLGVNQAFSENRLLVEG HHHHHHHCCCCEECCCCCCCCCCCCCEEEEECCCCEEHHHHHHHHCCCHHHCCCEEEEEC DLTVAMHLVRALEQLQALILPAFIARPLLRHYPNPRNKLTRACHIYLGLLTG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQNRTLESLAALGRRLWIATLLWVIGRTLCRAARVDEAVRHELAPLPDGLTIRLEVAGLT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHH QALIIHKAAGRWQCGVPTHPSSDLHPLRVRFKHPGIAFRALSFRLGVNQAFSENRLLVEG HHHHHHHCCCCEECCCCCCCCCCCCCEEEEECCCCEEHHHHHHHHCCCHHHCCCEEEEEC DLTVAMHLVRALEQLQALILPAFIARPLLRHYPNPRNKLTRACHIYLGLLTG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA