| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is yecE [H]
Identifier: 145299765
GI number: 145299765
Start: 3064701
End: 3065576
Strand: Direct
Name: yecE [H]
Synonym: ASA_2845
Alternate gene names: 145299765
Gene position: 3064701-3065576 (Clockwise)
Preceding gene: 145299761
Following gene: 145299766
Centisome position: 65.17
GC content: 61.19
Gene sequence:
>876_bases ATGGGCATAAACCGAGATAAACCCGCAGACAGGATCCGCCATGAGCCTCTTTTTGGGCCTGCCACAATGGTCGCACCCGG CCTGGCCCGGTCAATTATTGGGTGTGCCGAACATCTCGCCCACTACGCCCGGGTGTTCAACACAGTCGAAGGCAACACCA CCTTTTACGCCTCGCCCACCCCTGACACAGTGCAGCGCTGGGCCGATGCGGTGCCTGCACACTTTCGTTTCAGCTTCAAG TTTCCGAAAGAAATCAGTCACCAGAGCAATCTGGTGAGCGTAGACAAGCAGGTGACCGACTTCATTCGCCTGCTCACCCC GCTGCACGACAAGCTGGGGCTGCTCAAGCTGCAGCTGCCCGCGCGCTTCGGCCCGAGCGGCCTTCCCCGCCTCGCCGAAT TCTTCAATCGGCTGCCGACAGCGTTTCGCTATGCCCTCGAAGTACGTCATCCCGATTTCTTCGCCAAAGGGGAAGCAGAG CGCAGCCTCAACCGCATGCTGATGGAAAAAGGCATCAACCGCATCATGCTCGACAGCCGGCCACTGTTTTCTGTGCCGGC AACCACGGCAGCCATGATAGATGCACAGGGCAAGAAGCCCAGACTGCCGGTGCACCTACTGGCCACCGCCAGCGCCCCCG TGGTGCGGCTCATCGGTCTGCCGGAACCGGCCGCCAATCACCCCTTCCTGCCAAGCTGGTTGCCCCACTGGCGTCAGTGG CTGGCGGAGGGACAGGATCTCTACCTCTTTATACATACCGCCGACAATGCCCAGTCACCCGAACTGGCCCGTCAGATAAC ACACCTGTTGGGACAGGAGATGGCCCCCTGGCCGGGGGAAAACGATCGCGCGCGCCAGGGCGTGCTGCGCTTTTAG
Upstream 100 bases:
>100_bases ATTGGCAAACAAAAGGGCTGGCATTATAGAGGAAAACCCCCATTTGGGTAAAATGGCCAGCAGCCTCCTTTGCCCTGTTT TTTGCGTCTCAAGGCAAAAA
Downstream 100 bases:
>100_bases CCAGCCACTGCACCAGCCATTCATCAGGCGCAAAAAAAGCCACTTTTTTGTGGCCGGACAGGGCTCGGCGTCAAGACAAA TGCCCATCAATCCTCTACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MGINRDKPADRIRHEPLFGPATMVAPGLARSIIGCAEHLAHYARVFNTVEGNTTFYASPTPDTVQRWADAVPAHFRFSFK FPKEISHQSNLVSVDKQVTDFIRLLTPLHDKLGLLKLQLPARFGPSGLPRLAEFFNRLPTAFRYALEVRHPDFFAKGEAE RSLNRMLMEKGINRIMLDSRPLFSVPATTAAMIDAQGKKPRLPVHLLATASAPVVRLIGLPEPAANHPFLPSWLPHWRQW LAEGQDLYLFIHTADNAQSPELARQITHLLGQEMAPWPGENDRARQGVLRF
Sequences:
>Translated_291_residues MGINRDKPADRIRHEPLFGPATMVAPGLARSIIGCAEHLAHYARVFNTVEGNTTFYASPTPDTVQRWADAVPAHFRFSFK FPKEISHQSNLVSVDKQVTDFIRLLTPLHDKLGLLKLQLPARFGPSGLPRLAEFFNRLPTAFRYALEVRHPDFFAKGEAE RSLNRMLMEKGINRIMLDSRPLFSVPATTAAMIDAQGKKPRLPVHLLATASAPVVRLIGLPEPAANHPFLPSWLPHWRQW LAEGQDLYLFIHTADNAQSPELARQITHLLGQEMAPWPGENDRARQGVLRF >Mature_290_residues GINRDKPADRIRHEPLFGPATMVAPGLARSIIGCAEHLAHYARVFNTVEGNTTFYASPTPDTVQRWADAVPAHFRFSFKF PKEISHQSNLVSVDKQVTDFIRLLTPLHDKLGLLKLQLPARFGPSGLPRLAEFFNRLPTAFRYALEVRHPDFFAKGEAER SLNRMLMEKGINRIMLDSRPLFSVPATTAAMIDAQGKKPRLPVHLLATASAPVVRLIGLPEPAANHPFLPSWLPHWRQWL AEGQDLYLFIHTADNAQSPELARQITHLLGQEMAPWPGENDRARQGVLRF
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0759 family [H]
Homologues:
Organism=Escherichia coli, GI1788175, Length=228, Percent_Identity=48.2456140350877, Blast_Score=215, Evalue=2e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002763 [H]
Pfam domain/function: PF01904 DUF72 [H]
EC number: NA
Molecular weight: Translated: 32753; Mature: 32622
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGINRDKPADRIRHEPLFGPATMVAPGLARSIIGCAEHLAHYARVFNTVEGNTTFYASPT CCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC PDTVQRWADAVPAHFRFSFKFPKEISHQSNLVSVDKQVTDFIRLLTPLHDKLGLLKLQLP HHHHHHHHHCCCCCEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECC ARFGPSGLPRLAEFFNRLPTAFRYALEVRHPDFFAKGEAERSLNRMLMEKGINRIMLDSR CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCC PLFSVPATTAAMIDAQGKKPRLPVHLLATASAPVVRLIGLPEPAANHPFLPSWLPHWRQW CCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH LAEGQDLYLFIHTADNAQSPELARQITHLLGQEMAPWPGENDRARQGVLRF HHCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCC >Mature Secondary Structure GINRDKPADRIRHEPLFGPATMVAPGLARSIIGCAEHLAHYARVFNTVEGNTTFYASPT CCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC PDTVQRWADAVPAHFRFSFKFPKEISHQSNLVSVDKQVTDFIRLLTPLHDKLGLLKLQLP HHHHHHHHHCCCCCEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECC ARFGPSGLPRLAEFFNRLPTAFRYALEVRHPDFFAKGEAERSLNRMLMEKGINRIMLDSR CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCC PLFSVPATTAAMIDAQGKKPRLPVHLLATASAPVVRLIGLPEPAANHPFLPSWLPHWRQW CCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH LAEGQDLYLFIHTADNAQSPELARQITHLLGQEMAPWPGENDRARQGVLRF HHCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]