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The map label for this gene is ybfE [H]

Identifier: 145299744

GI number: 145299744

Start: 3023021

End: 3023317

Strand: Direct

Name: ybfE [H]

Synonym: ASA_2821

Alternate gene names: 145299744

Gene position: 3023021-3023317 (Clockwise)

Preceding gene: 145299743

Following gene: 145299745

Centisome position: 64.29

GC content: 53.54

Gene sequence:

>297_bases
ATGGCCAAACAGCAAACTGATCGAACAACACTGGATCTGTTCGCAAATGAGAAGCGCCCCGGCAGGCCAAAGACCAATCC
ACTCCCCCGTGAGACCCAACTCAAGATCAACAAGCGCAACCAGCTTAAGCGCGATCGCGAGAACGGTTTGAAACGGGTCG
AGTTAAAGGTGGAGGCCGAGTTGCTGGAGCGCCTGAACCAACTTGCGTTACAACAGAACGTCAGCCGAGCCGAGCTGATC
CAATCTATCCTGAAGCAACAGATTGAGTCTGCTTTCGCAGCAGGCATCGCAATCTGA

Upstream 100 bases:

>100_bases
TGGTACTCTGTCTGGGTTGCGCGGGTTTTGTCGCCAAGGGGCTGATCGAATTGGGCTGGGAAGGCTCAGGGATCGGCTAA
CTTATTTTCATCTGTGATGT

Downstream 100 bases:

>100_bases
CCGTTAAGCATTAACACCAGATACGGGTAACTAAACACTATGGCTAGTGTAGGTCTGTTTTTCGGCAGCGATACCGGTAA
TACCGAAGCTGTCGCCAAGA

Product: LexA regulated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MAKQQTDRTTLDLFANEKRPGRPKTNPLPRETQLKINKRNQLKRDRENGLKRVELKVEAELLERLNQLALQQNVSRAELI
QSILKQQIESAFAAGIAI

Sequences:

>Translated_98_residues
MAKQQTDRTTLDLFANEKRPGRPKTNPLPRETQLKINKRNQLKRDRENGLKRVELKVEAELLERLNQLALQQNVSRAELI
QSILKQQIESAFAAGIAI
>Mature_97_residues
AKQQTDRTTLDLFANEKRPGRPKTNPLPRETQLKINKRNQLKRDRENGLKRVELKVEAELLERLNQLALQQNVSRAELIQ
SILKQQIESAFAAGIAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081770, Length=97, Percent_Identity=65.979381443299, Blast_Score=129, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002145 [H]

Pfam domain/function: PF01402 RHH_1 [H]

EC number: NA

Molecular weight: Translated: 11273; Mature: 11142

Theoretical pI: Translated: 11.03; Mature: 11.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQQTDRTTLDLFANEKRPGRPKTNPLPRETQLKINKRNQLKRDRENGLKRVELKVEAE
CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCHHHHHHHHHHH
LLERLNQLALQQNVSRAELIQSILKQQIESAFAAGIAI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AKQQTDRTTLDLFANEKRPGRPKTNPLPRETQLKINKRNQLKRDRENGLKRVELKVEAE
CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCHHHHHHHHHHH
LLERLNQLALQQNVSRAELIQSILKQQIESAFAAGIAI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]