Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is proP [H]
Identifier: 145297063
GI number: 145297063
Start: 3283007
End: 3284683
Strand: Reverse
Name: proP [H]
Synonym: cgR_2959
Alternate gene names: 145297063
Gene position: 3284683-3283007 (Counterclockwise)
Preceding gene: 145297064
Following gene: 145297062
Centisome position: 99.11
GC content: 52.06
Gene sequence:
>1677_bases ATGTTGAAAAGAGAGGTGGTGTTTTCACTTCCCTTTTATAGGCAAAGCTTTAAGGAGTTGTACAGGAAGAAGGAAACACC GCCCAGGGGTGCGTTGGATGAAGATCATCTACAAACGAAGATTTCGTTATGCACTCATAAGATAAGACGAGAGGTTTTAC TCGTGAGCCCGATTCGCTCAAAAAAGAAAATCAAAGACGAACCAAGACTAACAGTCGATGATGTAAACGTAGTCCCCCCA AAGAAGATCCGCCCTGCCATTAAAGGCACTGTGGTGGGTAACTTTATGGAGTGGTACGACTTCGGTATTTATGGTTACCT GACGGTCACGATGACCGCAGTATTTACACAAGGCCTGCCTGAAGAATGGCAGCTGCTCGCTGTCATGTTTGGTTTCGCAG TGTCCTACCTGGTACGTCCATTGGGTGGTTTGATTCTGGGGCCATTAGGTGACAAGGTTGGTCGCCAAAAGGTTTTGTAC GTGACCATGGCGATGATGGCGATTTCCACCGCGCTGATTGGTGTGTTGCCGACGGCGGCGTCGATAGGCGCTTGGGCTTT GATTCTGCTTTATCTGTTGAAGATGATTCAGGGCTTCTCCACTGGTGGTGAGTACGCTGGCGCGACAACCTACGTGGCTG AGTTTGCTCCAGATCGCCGCAGAGGCTACTTCGGTTCCTTCCTTGATATGGGTTCCTACCTGGGCTTTGCTGCTGGCGCA TCCGTCGTTGCGATCACCACATGGGTGACTACCCACTATTGGGGTGCAAGCGCTATGGAAGATTTCGGTTGGCGAATCCC CTTCCTGACCGCCATCCCACTGGGAATTATTGCGGTGTACCTGCGTACTCGTATCCCAGAAACTCCTGCGTTTGAGAACA ACCAGGACGAAGACGAGGCAGTGATTGAGAAGGATTCCGATGATCCTTACGCTCGCCTTGGTCTGATGGGTGTTATCCGC CACCACTGGCGTCCACTGCTGATTGGTATTGCGATTGTGGCAGCGACCAACACTGCCGGTTACGCCCTGACCAGTTACAT GCCCGTGTATCTAGAGGAGCAGATCGGTCTGCACTCCGCATCCGCTGCCGCTGTGACCGTGCCGATTCTCGTTGTTATGT CCCTGCTGCTGCCATTTGTTGGTATGTGGAGTGACCGCGTGGGCCGCAAGCCTGTCTACGCGACTGCTGTTGCGGCAACG CTGATCTTGATGGTTCCTGCCTTCTTGATCATGAACACCGGAACTATCGGCGCCGTGCTAATTGCACTGTCCATGGTTGC TATTCCAACCGGTTTGTATGTGGCACTGTCTGCATCTGCATTGCCTGCGCTGTTCCCGACTGCGTCACGATTCTCCGGAA TGGGTATTTCCTACAACATTTCCGTGTCGTTGTTCGGTGGTACAACCCCGCTGATTACCCAGTTCCTGTTGCAGAAGACT GGCCTGGATATCGTTCCAGCGCTCTACATCATGTTCTTCTCTGCAATCGCAGGTGTGGCTCTGCTGTTCATGACTGAGTC TTCACAGAAGCCGCTGCTTGGTTCATTCCCAACTGTGGAAACCAAGTCTGAGGCCGTGGAGATCGTGAAGAACCAGGACG AGGATCCAAATATCGATCTCACCCACATGCCGTTTACTGATTCGGAAACCGCAGAACCCGAAAAGCAAAACGCATAA
Upstream 100 bases:
>100_bases CCCGCTCACCTGCATGAGTGTGGGGTCTTTTTGCATTCTTCCAGCTCCCAGACTTGAAAACGATCTGACTTTTCACCCCG AACCTTACTAAGGTCGATTC
Downstream 100 bases:
>100_bases CCTTAAAGCCCGCTGCAAGGCGGGCTTTTTTGGTGGCTGGGGGCGTCGAAAAGCGCTTATCGACGATTCCTCCTACCGGA ATCTCTCCCAATTTTCTTTG
Product: hypothetical protein
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MLKREVVFSLPFYRQSFKELYRKKETPPRGALDEDHLQTKISLCTHKIRREVLLVSPIRSKKKIKDEPRLTVDDVNVVPP KKIRPAIKGTVVGNFMEWYDFGIYGYLTVTMTAVFTQGLPEEWQLLAVMFGFAVSYLVRPLGGLILGPLGDKVGRQKVLY VTMAMMAISTALIGVLPTAASIGAWALILLYLLKMIQGFSTGGEYAGATTYVAEFAPDRRRGYFGSFLDMGSYLGFAAGA SVVAITTWVTTHYWGASAMEDFGWRIPFLTAIPLGIIAVYLRTRIPETPAFENNQDEDEAVIEKDSDDPYARLGLMGVIR HHWRPLLIGIAIVAATNTAGYALTSYMPVYLEEQIGLHSASAAAVTVPILVVMSLLLPFVGMWSDRVGRKPVYATAVAAT LILMVPAFLIMNTGTIGAVLIALSMVAIPTGLYVALSASALPALFPTASRFSGMGISYNISVSLFGGTTPLITQFLLQKT GLDIVPALYIMFFSAIAGVALLFMTESSQKPLLGSFPTVETKSEAVEIVKNQDEDPNIDLTHMPFTDSETAEPEKQNA
Sequences:
>Translated_558_residues MLKREVVFSLPFYRQSFKELYRKKETPPRGALDEDHLQTKISLCTHKIRREVLLVSPIRSKKKIKDEPRLTVDDVNVVPP KKIRPAIKGTVVGNFMEWYDFGIYGYLTVTMTAVFTQGLPEEWQLLAVMFGFAVSYLVRPLGGLILGPLGDKVGRQKVLY VTMAMMAISTALIGVLPTAASIGAWALILLYLLKMIQGFSTGGEYAGATTYVAEFAPDRRRGYFGSFLDMGSYLGFAAGA SVVAITTWVTTHYWGASAMEDFGWRIPFLTAIPLGIIAVYLRTRIPETPAFENNQDEDEAVIEKDSDDPYARLGLMGVIR HHWRPLLIGIAIVAATNTAGYALTSYMPVYLEEQIGLHSASAAAVTVPILVVMSLLLPFVGMWSDRVGRKPVYATAVAAT LILMVPAFLIMNTGTIGAVLIALSMVAIPTGLYVALSASALPALFPTASRFSGMGISYNISVSLFGGTTPLITQFLLQKT GLDIVPALYIMFFSAIAGVALLFMTESSQKPLLGSFPTVETKSEAVEIVKNQDEDPNIDLTHMPFTDSETAEPEKQNA >Mature_558_residues MLKREVVFSLPFYRQSFKELYRKKETPPRGALDEDHLQTKISLCTHKIRREVLLVSPIRSKKKIKDEPRLTVDDVNVVPP KKIRPAIKGTVVGNFMEWYDFGIYGYLTVTMTAVFTQGLPEEWQLLAVMFGFAVSYLVRPLGGLILGPLGDKVGRQKVLY VTMAMMAISTALIGVLPTAASIGAWALILLYLLKMIQGFSTGGEYAGATTYVAEFAPDRRRGYFGSFLDMGSYLGFAAGA SVVAITTWVTTHYWGASAMEDFGWRIPFLTAIPLGIIAVYLRTRIPETPAFENNQDEDEAVIEKDSDDPYARLGLMGVIR HHWRPLLIGIAIVAATNTAGYALTSYMPVYLEEQIGLHSASAAAVTVPILVVMSLLLPFVGMWSDRVGRKPVYATAVAAT LILMVPAFLIMNTGTIGAVLIALSMVAIPTGLYVALSASALPALFPTASRFSGMGISYNISVSLFGGTTPLITQFLLQKT GLDIVPALYIMFFSAIAGVALLFMTESSQKPLLGSFPTVETKSEAVEIVKNQDEDPNIDLTHMPFTDSETAEPEKQNA
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=487, Percent_Identity=39.4250513347023, Blast_Score=358, Evalue=1e-100, Organism=Escherichia coli, GI1788942, Length=443, Percent_Identity=28.6681715575621, Blast_Score=184, Evalue=1e-47, Organism=Escherichia coli, GI1788292, Length=451, Percent_Identity=29.9334811529933, Blast_Score=175, Evalue=7e-45, Organism=Escherichia coli, GI1789941, Length=443, Percent_Identity=28.4424379232506, Blast_Score=134, Evalue=1e-32, Organism=Escherichia coli, GI87082404, Length=368, Percent_Identity=23.0978260869565, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI87082231, Length=411, Percent_Identity=23.1143552311436, Blast_Score=72, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 60985; Mature: 60985
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKREVVFSLPFYRQSFKELYRKKETPPRGALDEDHLQTKISLCTHKIRREVLLVSPIRS CCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCH KKKIKDEPRLTVDDVNVVPPKKIRPAIKGTVVGNFMEWYDFGIYGYLTVTMTAVFTQGLP HHHCCCCCCEEECCCCCCCCHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC EEWQLLAVMFGFAVSYLVRPLGGLILGPLGDKVGRQKVLYVTMAMMAISTALIGVLPTAA HHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHH SIGAWALILLYLLKMIQGFSTGGEYAGATTYVAEFAPDRRRGYFGSFLDMGSYLGFAAGA HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHCCC SVVAITTWVTTHYWGASAMEDFGWRIPFLTAIPLGIIAVYLRTRIPETPAFENNQDEDEA CEEEEEHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH VIEKDSDDPYARLGLMGVIRHHWRPLLIGIAIVAATNTAGYALTSYMPVYLEEQIGLHSA HHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHCCCCCC SAAAVTVPILVVMSLLLPFVGMWSDRVGRKPVYATAVAATLILMVPAFLIMNTGTIGAVL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH IALSMVAIPTGLYVALSASALPALFPTASRFSGMGISYNISVSLFGGTTPLITQFLLQKT HHHHHHHHCCCHHEEEEHHHHHHHCCCHHHHCCCCEEEEEEEEEECCCHHHHHHHHHHHC GLDIVPALYIMFFSAIAGVALLFMTESSQKPLLGSFPTVETKSEAVEIVKNQDEDPNIDL CCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEE THMPFTDSETAEPEKQNA EECCCCCCCCCCCCCCCC >Mature Secondary Structure MLKREVVFSLPFYRQSFKELYRKKETPPRGALDEDHLQTKISLCTHKIRREVLLVSPIRS CCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCH KKKIKDEPRLTVDDVNVVPPKKIRPAIKGTVVGNFMEWYDFGIYGYLTVTMTAVFTQGLP HHHCCCCCCEEECCCCCCCCHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC EEWQLLAVMFGFAVSYLVRPLGGLILGPLGDKVGRQKVLYVTMAMMAISTALIGVLPTAA HHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHH SIGAWALILLYLLKMIQGFSTGGEYAGATTYVAEFAPDRRRGYFGSFLDMGSYLGFAAGA HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHCCC SVVAITTWVTTHYWGASAMEDFGWRIPFLTAIPLGIIAVYLRTRIPETPAFENNQDEDEA CEEEEEHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH VIEKDSDDPYARLGLMGVIRHHWRPLLIGIAIVAATNTAGYALTSYMPVYLEEQIGLHSA HHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHCCCCCC SAAAVTVPILVVMSLLLPFVGMWSDRVGRKPVYATAVAATLILMVPAFLIMNTGTIGAVL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH IALSMVAIPTGLYVALSASALPALFPTASRFSGMGISYNISVSLFGGTTPLITQFLLQKT HHHHHHHHCCCHHEEEEHHHHHHHCCCHHHHCCCCEEEEEEEEEECCCHHHHHHHHHHHC GLDIVPALYIMFFSAIAGVALLFMTESSQKPLLGSFPTVETKSEAVEIVKNQDEDPNIDL CCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEE THMPFTDSETAEPEKQNA EECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]