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The map label for this gene is tcbF [H]

Identifier: 145297046

GI number: 145297046

Start: 3260373

End: 3261464

Strand: Reverse

Name: tcbF [H]

Synonym: cgR_2942

Alternate gene names: 145297046

Gene position: 3261464-3260373 (Counterclockwise)

Preceding gene: 145297047

Following gene: 145297045

Centisome position: 98.41

GC content: 56.87

Gene sequence:

>1092_bases
TTGAACAACTCACTCGCATTCAATCACGACACCCTCCCACAGAAAGTCATGTTTGGGTACGGCAGGTCCAGTGCATTCTT
AAAGCAGGAAGTCGAACGCCGCGGCTCAGCCAAGGTCATGGTCATTGCGGGTGAACGGGAAATGTCGATCGCCCATAAGG
TGGCCTCAGAAATTGAGGTGGCGATCTGGCACGATGAAGTTGTCATGCACGTACCCATCGAAGTTGCAGAACGCGCCCGT
GCGGTGGCAACCGACAATGAGATCGATCTGCTGGTGTGTGTTGGTGGTGGATCTACCACCGGTTTGGCCAAAGCAATTGC
CATGACCACTGCCCTGCCCATCGTCGCGATCCCCACCACCTACGCAGGATCGGAAGCAACCAATGTGTGGGGCCTAACGG
AAGCAGCACGCAAAACAACCGGTGTTGATCTGAAAGTGCTCCCTGAAACAGTCATTTATGATTCCGAACTCACCATGTCA
CTGCCCGTAGATATGTCCGTGGCATCCGGACTCAACGGCCTGGCACACTGTATTGATTCTTTGTGGGGACCCAACGCCGA
CCCCATCAACGCAGCGCTTGCCGCCGAAGGAATCCGCGCACTCAACCAGGGACTGCCAAAAATTGTCGCGGACCCACACA
GCATCGAAGGACGCGACGAAGCCCTCTACGGCGCCTACCTCGCAGCAGTATCCTTCGCCTCCGCAGGCTCCGGACTGCAC
CACAAAATCTGCCACACCTTGGGAGGCACCTTCAACCTCCCCCACGCCCAAACCCACGCAACCGTGCTGCCATATGTTTT
GGCATTCAACGCAGGCGATGCACCAGAAGCTGAGCGCCGAGCCGCCACGGCGTTTGGAACCGACACCGCACTTGAAGGCC
TGCAACGCCTCCGCTTGGCAGTGAACGCACCAAAGCGACTTTCCGACTACGGCTTCGAAGCTTCAGGAATTGCCGAAGCA
GTGGACATCACGTTAGAGAAAGTTCCTGCCAACAATCCCCGCCCAGTCACCCGGGAAAACCTCAGCAGACTGCTTGAAGC
GGCACTCAACGGCGAGGATCCGGCAGTTCTTAGTGCAGTACTCAGCAACTAA

Upstream 100 bases:

>100_bases
AGCCTTCACCGGCCAGATCTTCAAGAAGGCTTAAACCCTTCCGATCTCGTTGGCTAGTTCTTTAAAACACCACCACACCT
TTTAGAAAGTGACTCTTTCA

Downstream 100 bases:

>100_bases
CGAGGCCACTTTTCAAGGAGAAAATCATGACAACCACCACCGCAGACCACAACATCAGCGCGCAGCAAAAGGCTGTTGAA
GAAGATCTGGTGAACCGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MNNSLAFNHDTLPQKVMFGYGRSSAFLKQEVERRGSAKVMVIAGEREMSIAHKVASEIEVAIWHDEVVMHVPIEVAERAR
AVATDNEIDLLVCVGGGSTTGLAKAIAMTTALPIVAIPTTYAGSEATNVWGLTEAARKTTGVDLKVLPETVIYDSELTMS
LPVDMSVASGLNGLAHCIDSLWGPNADPINAALAAEGIRALNQGLPKIVADPHSIEGRDEALYGAYLAAVSFASAGSGLH
HKICHTLGGTFNLPHAQTHATVLPYVLAFNAGDAPEAERRAATAFGTDTALEGLQRLRLAVNAPKRLSDYGFEASGIAEA
VDITLEKVPANNPRPVTRENLSRLLEAALNGEDPAVLSAVLSN

Sequences:

>Translated_363_residues
MNNSLAFNHDTLPQKVMFGYGRSSAFLKQEVERRGSAKVMVIAGEREMSIAHKVASEIEVAIWHDEVVMHVPIEVAERAR
AVATDNEIDLLVCVGGGSTTGLAKAIAMTTALPIVAIPTTYAGSEATNVWGLTEAARKTTGVDLKVLPETVIYDSELTMS
LPVDMSVASGLNGLAHCIDSLWGPNADPINAALAAEGIRALNQGLPKIVADPHSIEGRDEALYGAYLAAVSFASAGSGLH
HKICHTLGGTFNLPHAQTHATVLPYVLAFNAGDAPEAERRAATAFGTDTALEGLQRLRLAVNAPKRLSDYGFEASGIAEA
VDITLEKVPANNPRPVTRENLSRLLEAALNGEDPAVLSAVLSN
>Mature_363_residues
MNNSLAFNHDTLPQKVMFGYGRSSAFLKQEVERRGSAKVMVIAGEREMSIAHKVASEIEVAIWHDEVVMHVPIEVAERAR
AVATDNEIDLLVCVGGGSTTGLAKAIAMTTALPIVAIPTTYAGSEATNVWGLTEAARKTTGVDLKVLPETVIYDSELTMS
LPVDMSVASGLNGLAHCIDSLWGPNADPINAALAAEGIRALNQGLPKIVADPHSIEGRDEALYGAYLAAVSFASAGSGLH
HKICHTLGGTFNLPHAQTHATVLPYVLAFNAGDAPEAERRAATAFGTDTALEGLQRLRLAVNAPKRLSDYGFEASGIAEA
VDITLEKVPANNPRPVTRENLSRLLEAALNGEDPAVLSAVLSN

Specific function: Fucose metabolism; fourth step. [C]

COG id: COG1454

COG function: function code C; Alcohol dehydrogenase, class IV

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1789163, Length=382, Percent_Identity=27.4869109947644, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI48994951, Length=298, Percent_Identity=28.8590604026846, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI87082107, Length=291, Percent_Identity=29.2096219931272, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787493, Length=417, Percent_Identity=22.5419664268585, Blast_Score=72, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17537053, Length=429, Percent_Identity=22.8438228438228, Blast_Score=82, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6321181, Length=298, Percent_Identity=28.1879194630872, Blast_Score=105, Evalue=9e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001670 [H]

Pfam domain/function: PF00465 Fe-ADH [H]

EC number: =1.3.1.32 [H]

Molecular weight: Translated: 38302; Mature: 38302

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSLAFNHDTLPQKVMFGYGRSSAFLKQEVERRGSAKVMVIAGEREMSIAHKVASEIEV
CCCCEECCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHEEE
AIWHDEVVMHVPIEVAERARAVATDNEIDLLVCVGGGSTTGLAKAIAMTTALPIVAIPTT
EEEECCEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCEEEECCC
YAGSEATNVWGLTEAARKTTGVDLKVLPETVIYDSELTMSLPVDMSVASGLNGLAHCIDS
CCCCCCCCCCCHHHHHHHHCCCCEEECCHHEEECCCEEEECCCCHHHHHCCHHHHHHHHH
LWGPNADPINAALAAEGIRALNQGLPKIVADPHSIEGRDEALYGAYLAAVSFASAGSGLH
HCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH
HKICHTLGGTFNLPHAQTHATVLPYVLAFNAGDAPEAERRAATAFGTDTALEGLQRLRLA
HHHHHHCCCCCCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
VNAPKRLSDYGFEASGIAEAVDITLEKVPANNPRPVTRENLSRLLEAALNGEDPAVLSAV
HCCCHHHHHCCCCHHCHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
LSN
HCC
>Mature Secondary Structure
MNNSLAFNHDTLPQKVMFGYGRSSAFLKQEVERRGSAKVMVIAGEREMSIAHKVASEIEV
CCCCEECCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHEEE
AIWHDEVVMHVPIEVAERARAVATDNEIDLLVCVGGGSTTGLAKAIAMTTALPIVAIPTT
EEEECCEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCEEEECCC
YAGSEATNVWGLTEAARKTTGVDLKVLPETVIYDSELTMSLPVDMSVASGLNGLAHCIDS
CCCCCCCCCCCHHHHHHHHCCCCEEECCHHEEECCCEEEECCCCHHHHHCCHHHHHHHHH
LWGPNADPINAALAAEGIRALNQGLPKIVADPHSIEGRDEALYGAYLAAVSFASAGSGLH
HCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH
HKICHTLGGTFNLPHAQTHATVLPYVLAFNAGDAPEAERRAATAFGTDTALEGLQRLRLA
HHHHHHCCCCCCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
VNAPKRLSDYGFEASGIAEAVDITLEKVPANNPRPVTRENLSRLLEAALNGEDPAVLSAV
HCCCHHHHHCCCCHHCHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
LSN
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]