Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145296621
Identifier: 145296621
GI number: 145296621
Start: 2795138
End: 2796607
Strand: Direct
Name: 145296621
Synonym: cgR_2529
Alternate gene names: NA
Gene position: 2795138-2796607 (Clockwise)
Preceding gene: 145296618
Following gene: 145296622
Centisome position: 84.34
GC content: 51.43
Gene sequence:
>1470_bases ATGTTGAGCTTTGCGACCCTTCGTGGCCGCATTTCAACAGTTGACGCTGCAAAAGCCGCACCTCCGCCATCGCCACTAGC CCCGATTGATCTCACTGACCATAGTCAAGTGGCCGGTGTGATGAATTTGGCTGCGAGGATTGGCGACATTTTGCTTTCTT CAGGTACGTCAAATAGTGACACCAAGGTACAAGTTCGAGCAGTGACCTCTGCGTACGGTTTGTACTACACGCACGTGGAT ATCACGTTGAATACGATCACCATCTTCACCAACATCGGTGTGGAGAGGAAGATGCCGGTCAACGTGTTTCATGTTGTGGG CAAGTTGGACACCAACTTCTCCAAACTGTCTGAGGTTGACCGTTTGATCCGTTCCATTCAGGCTGGTGCGACCCCGCCTG AGGTTGCCGAGAAAATCCTGGACGAGTTGGAGCAATCCCCTGCGTCTTATGGTTTCCCTGTTGCGTTGCTTGGCTGGGCA ATGATGGGTGGCGCTGTTGCAGTGCTGTTGGGTGGTGGATGGCAGGTTTCCCTAATTGCTTTTATTACCGCGTTCACGAT CATTGCCACGACGTCATTTTTGGGAAAGAAGGGTTTGCCTACTTTCTTCCAAAATGTTGTTGGTGGTTTTATTGCCACGC TGCCTGCATCGATTGCTTATTCTTTGGCGTTGCAATTTGGTCTTGAGATCAAACCGAGCCAGATCATCGCATCTGGAATT GTTGTGCTGTTGGCAGGTTTGACACTTGTGCAATCTCTGCAGGACGGCATCACGGGCGCTCCGGTGACAGCAAGTGCACG ATTTTTTGAAACACTCCTGTTTACCGGCGGCATTGTTGCTGGCGTGGGTTTGGGCATTCAGCTTTCTGAAATCTTGCATG TCATGTTGCCTGCCATGGAGTCCGCTGCAGCACCTAATTATTCGTCTACATTCGCCCGCATTATCGCTGGTGGCTTCACC GCAGCGGCCTTCGCAGTGGGTTGTTACGCGGAGTGGTCCTCGGTGATTATTGCGGGGCTTACTGCGCTGATGGGTTCTGC GTTTTATTACCTCTTCGTTGTTTATTTAGGCCCCGTCTCTGCCGCTGCGATTGCTGCAACAGCAGTTGGTTTCACTGGTG GTTTGCTTGCCCGTCGATTCTTGATTCCACCGTTGATTGTGGCGATTGCCGGCATCACACCAATGCTTCCAGGTCTAGCA ATTTACCGCGGAATGTACGCCACCTTGAATGATCAAACACTCATGGGTTTCACCAACATTGCGGTTGCTTTAGCCACTGC TTCATCACTTGCCGCTGGCGTGGTTTTGGGTGAGTGGATTGCCCGCAGGCTACGTCGTCCACCACGCTTCAACCCATACC GTGCATTTACCAAGGCGAATGAGTTCTCCTTCCAGGAGGAAGCTGAGCAGAATCAGCGCCGGCAGAGAAAACGTCCAAAG ACTAATCAGAGATTCGGTAATAAAAAGTAA
Upstream 100 bases:
>100_bases TGTGTACATCACAATGGAATTCGGGGCTAGAGTATCTGGTGAACCGTGCATAAACGACCTGTGATTGGACTCTTTTTCCT TGCAAAATGTTTTCCAGCGG
Downstream 100 bases:
>100_bases AAATCAACCTGCTTAGGCGTCTTTCGCTTAAATAGCGTAGAATATCGGGTCGATCGCTTTTAAACACTCAGGAGGATCCT TGCCGGCCAAAATCACGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Threonine Export Protein; Integral Membrane Protein; Membrane Spanning Protein
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MLSFATLRGRISTVDAAKAAPPPSPLAPIDLTDHSQVAGVMNLAARIGDILLSSGTSNSDTKVQVRAVTSAYGLYYTHVD ITLNTITIFTNIGVERKMPVNVFHVVGKLDTNFSKLSEVDRLIRSIQAGATPPEVAEKILDELEQSPASYGFPVALLGWA MMGGAVAVLLGGGWQVSLIAFITAFTIIATTSFLGKKGLPTFFQNVVGGFIATLPASIAYSLALQFGLEIKPSQIIASGI VVLLAGLTLVQSLQDGITGAPVTASARFFETLLFTGGIVAGVGLGIQLSEILHVMLPAMESAAAPNYSSTFARIIAGGFT AAAFAVGCYAEWSSVIIAGLTALMGSAFYYLFVVYLGPVSAAAIAATAVGFTGGLLARRFLIPPLIVAIAGITPMLPGLA IYRGMYATLNDQTLMGFTNIAVALATASSLAAGVVLGEWIARRLRRPPRFNPYRAFTKANEFSFQEEAEQNQRRQRKRPK TNQRFGNKK
Sequences:
>Translated_489_residues MLSFATLRGRISTVDAAKAAPPPSPLAPIDLTDHSQVAGVMNLAARIGDILLSSGTSNSDTKVQVRAVTSAYGLYYTHVD ITLNTITIFTNIGVERKMPVNVFHVVGKLDTNFSKLSEVDRLIRSIQAGATPPEVAEKILDELEQSPASYGFPVALLGWA MMGGAVAVLLGGGWQVSLIAFITAFTIIATTSFLGKKGLPTFFQNVVGGFIATLPASIAYSLALQFGLEIKPSQIIASGI VVLLAGLTLVQSLQDGITGAPVTASARFFETLLFTGGIVAGVGLGIQLSEILHVMLPAMESAAAPNYSSTFARIIAGGFT AAAFAVGCYAEWSSVIIAGLTALMGSAFYYLFVVYLGPVSAAAIAATAVGFTGGLLARRFLIPPLIVAIAGITPMLPGLA IYRGMYATLNDQTLMGFTNIAVALATASSLAAGVVLGEWIARRLRRPPRFNPYRAFTKANEFSFQEEAEQNQRRQRKRPK TNQRFGNKK >Mature_489_residues MLSFATLRGRISTVDAAKAAPPPSPLAPIDLTDHSQVAGVMNLAARIGDILLSSGTSNSDTKVQVRAVTSAYGLYYTHVD ITLNTITIFTNIGVERKMPVNVFHVVGKLDTNFSKLSEVDRLIRSIQAGATPPEVAEKILDELEQSPASYGFPVALLGWA MMGGAVAVLLGGGWQVSLIAFITAFTIIATTSFLGKKGLPTFFQNVVGGFIATLPASIAYSLALQFGLEIKPSQIIASGI VVLLAGLTLVQSLQDGITGAPVTASARFFETLLFTGGIVAGVGLGIQLSEILHVMLPAMESAAAPNYSSTFARIIAGGFT AAAFAVGCYAEWSSVIIAGLTALMGSAFYYLFVVYLGPVSAAAIAATAVGFTGGLLARRFLIPPLIVAIAGITPMLPGLA IYRGMYATLNDQTLMGFTNIAVALATASSLAAGVVLGEWIARRLRRPPRFNPYRAFTKANEFSFQEEAEQNQRRQRKRPK TNQRFGNKK
Specific function: Unknown
COG id: COG2966
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51719; Mature: 51719
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSFATLRGRISTVDAAKAAPPPSPLAPIDLTDHSQVAGVMNLAARIGDILLSSGTSNSD CCCCHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC TKVQVRAVTSAYGLYYTHVDITLNTITIFTNIGVERKMPVNVFHVVGKLDTNFSKLSEVD CEEEEEEEHHHHCEEEEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHH RLIRSIQAGATPPEVAEKILDELEQSPASYGFPVALLGWAMMGGAVAVLLGGGWQVSLIA HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEEECCCCHHHHHH FITAFTIIATTSFLGKKGLPTFFQNVVGGFIATLPASIAYSLALQFGLEIKPSQIIASGI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VVLLAGLTLVQSLQDGITGAPVTASARFFETLLFTGGIVAGVGLGIQLSEILHVMLPAME HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHH SAAAPNYSSTFARIIAGGFTAAAFAVGCYAEWSSVIIAGLTALMGSAFYYLFVVYLGPVS HHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AAAIAATAVGFTGGLLARRFLIPPLIVAIAGITPMLPGLAIYRGMYATLNDQTLMGFTNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHH AVALATASSLAAGVVLGEWIARRLRRPPRFNPYRAFTKANEFSFQEEAEQNQRRQRKRPK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCC TNQRFGNKK CCCCCCCCC >Mature Secondary Structure MLSFATLRGRISTVDAAKAAPPPSPLAPIDLTDHSQVAGVMNLAARIGDILLSSGTSNSD CCCCHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC TKVQVRAVTSAYGLYYTHVDITLNTITIFTNIGVERKMPVNVFHVVGKLDTNFSKLSEVD CEEEEEEEHHHHCEEEEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHH RLIRSIQAGATPPEVAEKILDELEQSPASYGFPVALLGWAMMGGAVAVLLGGGWQVSLIA HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEEECCCCHHHHHH FITAFTIIATTSFLGKKGLPTFFQNVVGGFIATLPASIAYSLALQFGLEIKPSQIIASGI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VVLLAGLTLVQSLQDGITGAPVTASARFFETLLFTGGIVAGVGLGIQLSEILHVMLPAME HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHH SAAAPNYSSTFARIIAGGFTAAAFAVGCYAEWSSVIIAGLTALMGSAFYYLFVVYLGPVS HHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AAAIAATAVGFTGGLLARRFLIPPLIVAIAGITPMLPGLAIYRGMYATLNDQTLMGFTNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHH AVALATASSLAAGVVLGEWIARRLRRPPRFNPYRAFTKANEFSFQEEAEQNQRRQRKRPK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCC TNQRFGNKK CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA