Definition | Corynebacterium glutamicum R chromosome, complete genome. |
---|---|
Accession | NC_009342 |
Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is pncB1 [H]
Identifier: 145296514
GI number: 145296514
Start: 2665207
End: 2666547
Strand: Direct
Name: pncB1 [H]
Synonym: cgR_2425
Alternate gene names: 145296514
Gene position: 2665207-2666547 (Clockwise)
Preceding gene: 145296513
Following gene: 145296515
Centisome position: 80.42
GC content: 56.45
Gene sequence:
>1341_bases GTGAATACCAATCCTTCTGAATTCTCCTCGAACCGTTCGACAGCTCTACTAACTGATAAATATGAGCTGACCATGCTTCA AGCAGCGCTCGCTGATGGTTCTGCAGAGCGTCCCTCAACGTTTGAGGTCTTTAGCCGCCGCCTTCCCAACGAGCGCCGAT ACGGTGTCGTCGCAGGAACAGCACGAGTGTTGAAGGCGATCCGTGACTTTGTATTCACAGAGGAACAACTCGCCGATCTC GACTTCTTAGACGACCGCACCCTGGAATACCTCCGCAACTACCGCTTCACCGGCCAAGTTGATGGATACCGCGAAGGCGA AATCTACTTCCCACAGTCCCCTCTTCTGACTGTGCGCGGCACTTTTGCAGAATGCGTCATCCTAGAGACCGTCATTTTGT CCATCATGAATGCAGATTCTGCCGTCGCTTCCGCCGCTGCGCGCATGGTCACCGCAGCTGATGGTCGCCCCATCATCGAA ATGGGATCCAGGCGCACCCATGAATACTCGGCAGTCACCGCATCCCGCGCAGCATACCTCGCTGGATTCTCCACCACCTC CAACCTCGAGGCGGCCTACCGCTACGGAATTCCAGCTTCCGGAACCTCCGCCCACGCATGGACTTTGCTGCACATCAACG ATGACGGCACCCCCAACGAAGCAGCAGCTTTCAAAGCACAGGTTGAATCCCTCGGGGTGGACACCACCTTGCTGGTAGAT ACTTATGACATCACCCAAGGTGTGGCCACTGCCATTGAAGTTGCAGGTCCAGACCTTGGTGGCGTACGCATCGACTCCGG CGACCTAGGTGTGCTTGCACGCAAGGTCCGCAAGCAGCTCGACGATCTCAACGCCCACAACACCAAGATTGTGGTCTCCT CCGACCTGGATGAATTCGCCATCGCGGGCCTTCGCGGCGAACCAGTTGACGTCTTTGGCGTTGGCACCTCCGTTGTCACA GGTTCTGGCGCACCAACCGCTGGCCTCGTGTACAAGATCGTGGAAGTTGCCGGTCACCCTGTGGCCAAGCGTTCCCGAAA CAAGGAAAGCTACGGTGGTGGCAAGAAGGCTGTACGCACCCACCGCAAGTCCGGTACCGCAATCGAAGAAATCGTCTACC CATTCAATGCCGAAGCACCAGATACTGGAAAGCTCGACACCTTGAACCTAACCATCCCATTGATGCGCGACGGTGAAATC GTTCCAGGTCTGCCTACTTTGGAAGATTCCCGCGCATATTTGGCCAAGCAGTTGGTCTCTTTGCCATGGGAAGGCCTTGC ACTGTCTCGCGATGAGCCTGTGCTGCACACTCGTTTTGTGGGATTCCCGCCGGTCGCTTAG
Upstream 100 bases:
>100_bases AGTACGATGCCCTCGGAGTTGGTGTGGCCTACAAGGACGAACGCGCATGGATAGTGGTGGAGTTCACTGAGCCCGCTGGT GATTCCGTAGAATCAACAGA
Downstream 100 bases:
>100_bases GCAATTCGGTCTCACCAAACCACAGTGCCCACGGATCGGGTTTTCCGATTTCGTGGGCACTCTGGTTTGGTTTGTCGCCC TCGAAACCGGACACAGCTGC
Product: nicotinate phosphoribosyltransferase
Products: NA
Alternate protein names: NAPRTase pncB1 [H]
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MNTNPSEFSSNRSTALLTDKYELTMLQAALADGSAERPSTFEVFSRRLPNERRYGVVAGTARVLKAIRDFVFTEEQLADL DFLDDRTLEYLRNYRFTGQVDGYREGEIYFPQSPLLTVRGTFAECVILETVILSIMNADSAVASAAARMVTAADGRPIIE MGSRRTHEYSAVTASRAAYLAGFSTTSNLEAAYRYGIPASGTSAHAWTLLHINDDGTPNEAAAFKAQVESLGVDTTLLVD TYDITQGVATAIEVAGPDLGGVRIDSGDLGVLARKVRKQLDDLNAHNTKIVVSSDLDEFAIAGLRGEPVDVFGVGTSVVT GSGAPTAGLVYKIVEVAGHPVAKRSRNKESYGGGKKAVRTHRKSGTAIEEIVYPFNAEAPDTGKLDTLNLTIPLMRDGEI VPGLPTLEDSRAYLAKQLVSLPWEGLALSRDEPVLHTRFVGFPPVA
Sequences:
>Translated_446_residues MNTNPSEFSSNRSTALLTDKYELTMLQAALADGSAERPSTFEVFSRRLPNERRYGVVAGTARVLKAIRDFVFTEEQLADL DFLDDRTLEYLRNYRFTGQVDGYREGEIYFPQSPLLTVRGTFAECVILETVILSIMNADSAVASAAARMVTAADGRPIIE MGSRRTHEYSAVTASRAAYLAGFSTTSNLEAAYRYGIPASGTSAHAWTLLHINDDGTPNEAAAFKAQVESLGVDTTLLVD TYDITQGVATAIEVAGPDLGGVRIDSGDLGVLARKVRKQLDDLNAHNTKIVVSSDLDEFAIAGLRGEPVDVFGVGTSVVT GSGAPTAGLVYKIVEVAGHPVAKRSRNKESYGGGKKAVRTHRKSGTAIEEIVYPFNAEAPDTGKLDTLNLTIPLMRDGEI VPGLPTLEDSRAYLAKQLVSLPWEGLALSRDEPVLHTRFVGFPPVA >Mature_446_residues MNTNPSEFSSNRSTALLTDKYELTMLQAALADGSAERPSTFEVFSRRLPNERRYGVVAGTARVLKAIRDFVFTEEQLADL DFLDDRTLEYLRNYRFTGQVDGYREGEIYFPQSPLLTVRGTFAECVILETVILSIMNADSAVASAAARMVTAADGRPIIE MGSRRTHEYSAVTASRAAYLAGFSTTSNLEAAYRYGIPASGTSAHAWTLLHINDDGTPNEAAAFKAQVESLGVDTTLLVD TYDITQGVATAIEVAGPDLGGVRIDSGDLGVLARKVRKQLDDLNAHNTKIVVSSDLDEFAIAGLRGEPVDVFGVGTSVVT GSGAPTAGLVYKIVEVAGHPVAKRSRNKESYGGGKKAVRTHRKSGTAIEEIVYPFNAEAPDTGKLDTLNLTIPLMRDGEI VPGLPTLEDSRAYLAKQLVSLPWEGLALSRDEPVLHTRFVGFPPVA
Specific function: Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN) [H]
COG id: COG1488
COG function: function code H; Nicotinic acid phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAPRTase family [H]
Homologues:
Organism=Homo sapiens, GI194394158, Length=486, Percent_Identity=30.2469135802469, Blast_Score=151, Evalue=9e-37, Organism=Caenorhabditis elegans, GI71997947, Length=499, Percent_Identity=29.8597194388778, Blast_Score=182, Evalue=4e-46, Organism=Caenorhabditis elegans, GI71997952, Length=499, Percent_Identity=29.8597194388778, Blast_Score=182, Evalue=4e-46, Organism=Caenorhabditis elegans, GI71997955, Length=235, Percent_Identity=32.3404255319149, Blast_Score=121, Evalue=6e-28, Organism=Drosophila melanogaster, GI24581587, Length=494, Percent_Identity=26.7206477732794, Blast_Score=135, Evalue=7e-32, Organism=Drosophila melanogaster, GI161076680, Length=205, Percent_Identity=28.780487804878, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24581595, Length=205, Percent_Identity=28.780487804878, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI28574709, Length=205, Percent_Identity=28.780487804878, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24581593, Length=205, Percent_Identity=28.780487804878, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24581591, Length=205, Percent_Identity=28.780487804878, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015977 - InterPro: IPR007229 - InterPro: IPR006405 - InterPro: IPR002638 [H]
Pfam domain/function: PF04095 NAPRTase [H]
EC number: =2.4.2.11 [H]
Molecular weight: Translated: 48080; Mature: 48080
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTNPSEFSSNRSTALLTDKYELTMLQAALADGSAERPSTFEVFSRRLPNERRYGVVAGT CCCCCCHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEEHH ARVLKAIRDFVFTEEQLADLDFLDDRTLEYLRNYRFTGQVDGYREGEIYFPQSPLLTVRG HHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEECCEEECCCCCCEEEEC TFAECVILETVILSIMNADSAVASAAARMVTAADGRPIIEMGSRRTHEYSAVTASRAAYL CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHEE AGFSTTSNLEAAYRYGIPASGTSAHAWTLLHINDDGTPNEAAAFKAQVESLGVDTTLLVD EECCCCCCCHHHEEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEE TYDITQGVATAIEVAGPDLGGVRIDSGDLGVLARKVRKQLDDLNAHNTKIVVSSDLDEFA EHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHH IAGLRGEPVDVFGVGTSVVTGSGAPTAGLVYKIVEVAGHPVAKRSRNKESYGGGKKAVRT HCCCCCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHH HRKSGTAIEEIVYPFNAEAPDTGKLDTLNLTIPLMRDGEIVPGLPTLEDSRAYLAKQLVS HHCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH LPWEGLALSRDEPVLHTRFVGFPPVA CCCCCEEECCCCCCEEEEECCCCCCC >Mature Secondary Structure MNTNPSEFSSNRSTALLTDKYELTMLQAALADGSAERPSTFEVFSRRLPNERRYGVVAGT CCCCCCHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEEHH ARVLKAIRDFVFTEEQLADLDFLDDRTLEYLRNYRFTGQVDGYREGEIYFPQSPLLTVRG HHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEECCEEECCCCCCEEEEC TFAECVILETVILSIMNADSAVASAAARMVTAADGRPIIEMGSRRTHEYSAVTASRAAYL CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHEE AGFSTTSNLEAAYRYGIPASGTSAHAWTLLHINDDGTPNEAAAFKAQVESLGVDTTLLVD EECCCCCCCHHHEEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEE TYDITQGVATAIEVAGPDLGGVRIDSGDLGVLARKVRKQLDDLNAHNTKIVVSSDLDEFA EHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHH IAGLRGEPVDVFGVGTSVVTGSGAPTAGLVYKIVEVAGHPVAKRSRNKESYGGGKKAVRT HCCCCCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHH HRKSGTAIEEIVYPFNAEAPDTGKLDTLNLTIPLMRDGEIVPGLPTLEDSRAYLAKQLVS HHCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH LPWEGLALSRDEPVLHTRFVGFPPVA CCCCCEEECCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]