Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145296500
Identifier: 145296500
GI number: 145296500
Start: 2654716
End: 2655180
Strand: Direct
Name: 145296500
Synonym: cgR_2411
Alternate gene names: NA
Gene position: 2654716-2655180 (Clockwise)
Preceding gene: 145296499
Following gene: 145296501
Centisome position: 80.1
GC content: 48.82
Gene sequence:
>465_bases ATGAGCGAGCCAGGGCCATCCGGGGTTAAAGAAAAGAAGAAAGTAAAGGCAAGTCACATTGTCTTTCTTCTCATTTGTTT TATCGCAGCCTGCGCGTTGGCGTGGTGGCAGTGGTCAAGATTCCAGTCCGGGTCTGGAACTTTCCAAAACCTAGGCTATG CCTTCCAGTGGCCTCTTATCGGAGCATTCTTTGTTTATGCCTACCGCAAGTATTTGCAGTATGAGAATGAGTCCATTGAG TTAGAAAACATGGAAGCCAAAATGATGGCGGAGCAAGGCAAAACACCAGTTGCGCAATCAGAGCAGGAAGATAGCTTCGT TCAGCTCTCTCACCGTCCGAGCTTGGTGGAAGATGACAGCGTCAAGGAAATCGACGAATCCTTCCTGCCGTCTCGCCCGA CAATGGATGTGGAAGAGTTCAACAGGTTGAATGATCCGCATGCAAGGAGACGTCGAAAAGCATAA
Upstream 100 bases:
>100_bases TTACTATACATGGTGTAGTCCCAAATTAACTAATGCGGGTGACCAACTGCACCATAAAAAAAATTCGCTTATCGTAAATC AGCAGGTAGAATAACACTCT
Downstream 100 bases:
>100_bases ACCTGGAACTTTTCCGGGCCCGCGCCCGACTGCTTTGCTACAGCCCCCTCCCGCTAATTTATTTTTGAAGGAAGAGTTGC GTGTCTACCACCACCCCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSEPGPSGVKEKKKVKASHIVFLLICFIAACALAWWQWSRFQSGSGTFQNLGYAFQWPLIGAFFVYAYRKYLQYENESIE LENMEAKMMAEQGKTPVAQSEQEDSFVQLSHRPSLVEDDSVKEIDESFLPSRPTMDVEEFNRLNDPHARRRRKA
Sequences:
>Translated_154_residues MSEPGPSGVKEKKKVKASHIVFLLICFIAACALAWWQWSRFQSGSGTFQNLGYAFQWPLIGAFFVYAYRKYLQYENESIE LENMEAKMMAEQGKTPVAQSEQEDSFVQLSHRPSLVEDDSVKEIDESFLPSRPTMDVEEFNRLNDPHARRRRKA >Mature_153_residues SEPGPSGVKEKKKVKASHIVFLLICFIAACALAWWQWSRFQSGSGTFQNLGYAFQWPLIGAFFVYAYRKYLQYENESIEL ENMEAKMMAEQGKTPVAQSEQEDSFVQLSHRPSLVEDDSVKEIDESFLPSRPTMDVEEFNRLNDPHARRRRKA
Specific function: Unknown
COG id: COG4578
COG function: function code K; Glucitol operon activator
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML1177 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17801; Mature: 17670
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPGPSGVKEKKKVKASHIVFLLICFIAACALAWWQWSRFQSGSGTFQNLGYAFQWPLI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEEEHHHH GAFFVYAYRKYLQYENESIELENMEAKMMAEQGKTPVAQSEQEDSFVQLSHRPSLVEDDS HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCH VKEIDESFLPSRPTMDVEEFNRLNDPHARRRRKA HHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHCCC >Mature Secondary Structure SEPGPSGVKEKKKVKASHIVFLLICFIAACALAWWQWSRFQSGSGTFQNLGYAFQWPLI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEEEHHHH GAFFVYAYRKYLQYENESIELENMEAKMMAEQGKTPVAQSEQEDSFVQLSHRPSLVEDDS HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCH VKEIDESFLPSRPTMDVEEFNRLNDPHARRRRKA HHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]