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The map label for this gene is yvrC [H]

Identifier: 145296076

GI number: 145296076

Start: 2196629

End: 2197618

Strand: Reverse

Name: yvrC [H]

Synonym: cgR_1998

Alternate gene names: 145296076

Gene position: 2197618-2196629 (Counterclockwise)

Preceding gene: 145296077

Following gene: 145296075

Centisome position: 66.31

GC content: 52.12

Gene sequence:

>990_bases
ATGGTTTCAACCACAACATCTCGCTCAATCGCTGGACTGTCAGTGCTTGTGGCAACAGCACTAATCGCTGGCTGTAGTTC
CGCAGAGGATGGGACGGTTGACTCGGGGAGCAGCACAGAGGCCACCACAACCCAAAGCAAGGAAGGTTTTCCTGTCACCG
TCACGTTTGCCCCAGAAGCAGCTGTGACCATTGAGGAACAACCAGAGCGCATCGTCAGTTTGTCCCCAGCGATTACAGAA
ACCTTGTTCGCTGTCGGGGCAGGGGATCATGTCGTCGCAGTGGATGAATACTCAAACTACCCAGAGGACGCACCGCTGGT
GCAGGGTTTGTCTGGTTTTACTCCCAATGTGGAGTCCATCTTGGATTACGATCCTGACCTGGTCGTGTTGATGTCTGCAG
ATGATTCCATTTTGACCGGCCTGGATGCTGCAGGAGTGGATACTTTAGTTATCCCCGCAGCAGAGAACCTGGATGAGACC
TACTCCCAGATTGAACAAGTAGGTCGAGCCACCGGATTTGAAGATCAAGCAACAACGGTTGTTGATCAGATGAAAACCGC
CATTGATGCTGCAGTTGCCACAGTTCCTGAAGAGGTAAAAGAGCAGGGCTTAACCTACTTCCACGAGCTGGGCAGTGATT
TGTTCACTGTGTCAGAGCAAACCTACATCGGTCAGATTTACGACATGTTTGGTCTCACCTCTATTGCTGACGGTGGCGAC
GCTTACTCGCAGCTATCCAACGAAGCAATCATTGCGGCAAACCCTGATCTGATTTTCCTCAGCGATGCCAAGGCCGAAAA
CCTCACTGCAGAAGATATTGCGGCGCGTCCAGGGTGGGACACCATTGATGCAGTAGCCAATGGACGTATCTACATTTTGG
ACGATGATATTGCTTCCAGGTGGGGACCTCGCGTATCCCAGCTGGTGGAAGAAATCGCAGCGCAGTTGAATCAGCTTGCT
TCTTCTGAAGCCGTGCCGGCCGCTGCTTAA

Upstream 100 bases:

>100_bases
AGGCCTACCGCTCAGCATAAGAACACTTGGCAAACCTCACGGTTTCCACCAGTTAAGATGTTGTGAGACAAATCCAAACA
TAGAAGGGCTGTGCATTCTC

Downstream 100 bases:

>100_bases
GTTTTCGTGCTGAAGAGAATTTTCCTCAACCCCTGGGTGGCTACCGCGTTGTCGGTAGTCATTTTGGGGTTTGTGGTGCT
GTTTTCAGGTTTTAGCGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MVSTTTSRSIAGLSVLVATALIAGCSSAEDGTVDSGSSTEATTTQSKEGFPVTVTFAPEAAVTIEEQPERIVSLSPAITE
TLFAVGAGDHVVAVDEYSNYPEDAPLVQGLSGFTPNVESILDYDPDLVVLMSADDSILTGLDAAGVDTLVIPAAENLDET
YSQIEQVGRATGFEDQATTVVDQMKTAIDAAVATVPEEVKEQGLTYFHELGSDLFTVSEQTYIGQIYDMFGLTSIADGGD
AYSQLSNEAIIAANPDLIFLSDAKAENLTAEDIAARPGWDTIDAVANGRIYILDDDIASRWGPRVSQLVEEIAAQLNQLA
SSEAVPAAA

Sequences:

>Translated_329_residues
MVSTTTSRSIAGLSVLVATALIAGCSSAEDGTVDSGSSTEATTTQSKEGFPVTVTFAPEAAVTIEEQPERIVSLSPAITE
TLFAVGAGDHVVAVDEYSNYPEDAPLVQGLSGFTPNVESILDYDPDLVVLMSADDSILTGLDAAGVDTLVIPAAENLDET
YSQIEQVGRATGFEDQATTVVDQMKTAIDAAVATVPEEVKEQGLTYFHELGSDLFTVSEQTYIGQIYDMFGLTSIADGGD
AYSQLSNEAIIAANPDLIFLSDAKAENLTAEDIAARPGWDTIDAVANGRIYILDDDIASRWGPRVSQLVEEIAAQLNQLA
SSEAVPAAA
>Mature_329_residues
MVSTTTSRSIAGLSVLVATALIAGCSSAEDGTVDSGSSTEATTTQSKEGFPVTVTFAPEAAVTIEEQPERIVSLSPAITE
TLFAVGAGDHVVAVDEYSNYPEDAPLVQGLSGFTPNVESILDYDPDLVVLMSADDSILTGLDAAGVDTLVIPAAENLDET
YSQIEQVGRATGFEDQATTVVDQMKTAIDAAVATVPEEVKEQGLTYFHELGSDLFTVSEQTYIGQIYDMFGLTSIADGGD
AYSQLSNEAIIAANPDLIFLSDAKAENLTAEDIAARPGWDTIDAVANGRIYILDDDIASRWGPRVSQLVEEIAAQLNQLA
SSEAVPAAA

Specific function: Probably part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 34468; Mature: 34468

Theoretical pI: Translated: 3.52; Mature: 3.52

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSTTTSRSIAGLSVLVATALIAGCSSAEDGTVDSGSSTEATTTQSKEGFPVTVTFAPEA
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCE
AVTIEEQPERIVSLSPAITETLFAVGAGDHVVAVDEYSNYPEDAPLVQGLSGFTPNVESI
EEEECCCCCHHEECCHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCHHHH
LDYDPDLVVLMSADDSILTGLDAAGVDTLVIPAAENLDETYSQIEQVGRATGFEDQATTV
HCCCCCEEEEEECCCHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHH
VDQMKTAIDAAVATVPEEVKEQGLTYFHELGSDLFTVSEQTYIGQIYDMFGLTSIADGGD
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEECCHHHHHHHHHHHHHHHCCCCCH
AYSQLSNEAIIAANPDLIFLSDAKAENLTAEDIAARPGWDTIDAVANGRIYILDDDIASR
HHHHHCCCEEEEECCCEEEEECCCCCCCCHHHHCCCCCCCHHHHHHCCEEEEEECHHHHH
WGPRVSQLVEEIAAQLNQLASSEAVPAAA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVSTTTSRSIAGLSVLVATALIAGCSSAEDGTVDSGSSTEATTTQSKEGFPVTVTFAPEA
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCE
AVTIEEQPERIVSLSPAITETLFAVGAGDHVVAVDEYSNYPEDAPLVQGLSGFTPNVESI
EEEECCCCCHHEECCHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCHHHH
LDYDPDLVVLMSADDSILTGLDAAGVDTLVIPAAENLDETYSQIEQVGRATGFEDQATTV
HCCCCCEEEEEECCCHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHH
VDQMKTAIDAAVATVPEEVKEQGLTYFHELGSDLFTVSEQTYIGQIYDMFGLTSIADGGD
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEECCHHHHHHHHHHHHHHHCCCCCH
AYSQLSNEAIIAANPDLIFLSDAKAENLTAEDIAARPGWDTIDAVANGRIYILDDDIASR
HHHHHCCCEEEEECCCEEEEECCCCCCCCHHHHCCCCCCCHHHHHHCCEEEEEECHHHHH
WGPRVSQLVEEIAAQLNQLASSEAVPAAA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]