Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145296035
Identifier: 145296035
GI number: 145296035
Start: 2153370
End: 2153987
Strand: Reverse
Name: 145296035
Synonym: cgR_1957
Alternate gene names: NA
Gene position: 2153987-2153370 (Counterclockwise)
Preceding gene: 145296036
Following gene: 145296034
Centisome position: 64.99
GC content: 53.07
Gene sequence:
>618_bases ATGAGCAAAGCTTTTGATGCAACCAAAGTGCGCAAAGCTGTGCTCACCGTCGCGCTGCTTAACTTCGCTTATTTCTTTGT AGAGTTCTTTATTGCATTAAGCGCAGGCTCCGTTTCTCTACTGGCTGACAGTGTCGATTTTCTTGAAGACACCTCCATCA ACCTGCTCATTTTCATTGCCCTAGGATGGCCGTTGGCGAGGCGCGCAGTGATGGGCAAACTTATGGCGATTGTGATTCTT GCACCTGCTGCTTTTGCTGCGTGGGCAGCGATTCAACGGTTTTCCGCACCGCAAGCGCCCGAGGTGATTCCGATCATCGT CGCTTCTCTGGGCGCCGTCGTGATCAACGGCGCGAGTGCCATCATTATTTCTCGAGTGCGACAACATGGTGGCTCGCTTG GCCAAGCTGCCTTCCTATCCGCCCGAAATGACGTCCTGATCAACATTGCCATCATCATGATGGCCTTAATTACCGCATGG ACGACGTCTGGATGGCCAGATTTGATCCTAGGTTGTTTCATCATTCTGCTCGCACTGCACGCCGCTCACGAGGTGTGGGA AGTCAGTGAGGAAGAACGCCTCGCCTCCAAAGCCCTTGCTGGGGAAGCCATCGATTAG
Upstream 100 bases:
>100_bases AGGGGAGCCCTGTGGACGCTGTGGCACACAGATCGTCCGGGAAAACTTCATGAACCGTGGATCTCACTACTGCCCAAACT GCCAGAAGCGGCGCTAGCTG
Downstream 100 bases:
>100_bases GGAAGGAGCTTGAGTTTTTGTGGATTTGAGCTGTTTATTGGGCTCGTTGCAGGTCGCTATGGCAAGCCAGGTACACCGCA CAGCGAAGAACAACACAGCG
Product: Co/Zn/Cd efflux system component
Products: NA
Alternate protein names: Co/Zn/Cd Efflux System Component; Cation Efflux Transporter; Co/Zn/Cd Efflux System Component-Like Protein; Cation Efflux System Protein
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MSKAFDATKVRKAVLTVALLNFAYFFVEFFIALSAGSVSLLADSVDFLEDTSINLLIFIALGWPLARRAVMGKLMAIVIL APAAFAAWAAIQRFSAPQAPEVIPIIVASLGAVVINGASAIIISRVRQHGGSLGQAAFLSARNDVLINIAIIMMALITAW TTSGWPDLILGCFIILLALHAAHEVWEVSEEERLASKALAGEAID
Sequences:
>Translated_205_residues MSKAFDATKVRKAVLTVALLNFAYFFVEFFIALSAGSVSLLADSVDFLEDTSINLLIFIALGWPLARRAVMGKLMAIVIL APAAFAAWAAIQRFSAPQAPEVIPIIVASLGAVVINGASAIIISRVRQHGGSLGQAAFLSARNDVLINIAIIMMALITAW TTSGWPDLILGCFIILLALHAAHEVWEVSEEERLASKALAGEAID >Mature_204_residues SKAFDATKVRKAVLTVALLNFAYFFVEFFIALSAGSVSLLADSVDFLEDTSINLLIFIALGWPLARRAVMGKLMAIVILA PAAFAAWAAIQRFSAPQAPEVIPIIVASLGAVVINGASAIIISRVRQHGGSLGQAAFLSARNDVLINIAIIMMALITAWT TSGWPDLILGCFIILLALHAAHEVWEVSEEERLASKALAGEAID
Specific function: Unknown
COG id: COG1230
COG function: function code P; Co/Zn/Cd efflux system component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21832; Mature: 21701
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKAFDATKVRKAVLTVALLNFAYFFVEFFIALSAGSVSLLADSVDFLEDTSINLLIFIA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEE LGWPLARRAVMGKLMAIVILAPAAFAAWAAIQRFSAPQAPEVIPIIVASLGAVVINGASA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHH IIISRVRQHGGSLGQAAFLSARNDVLINIAIIMMALITAWTTSGWPDLILGCFIILLALH HHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AAHEVWEVSEEERLASKALAGEAID HHHHHHHCCHHHHHHHHHHCCCCCC >Mature Secondary Structure SKAFDATKVRKAVLTVALLNFAYFFVEFFIALSAGSVSLLADSVDFLEDTSINLLIFIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEE LGWPLARRAVMGKLMAIVILAPAAFAAWAAIQRFSAPQAPEVIPIIVASLGAVVINGASA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHH IIISRVRQHGGSLGQAAFLSARNDVLINIAIIMMALITAWTTSGWPDLILGCFIILLALH HHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AAHEVWEVSEEERLASKALAGEAID HHHHHHHCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA