Click here to switch to the map view.

The map label for this gene is 145296032

Identifier: 145296032

GI number: 145296032

Start: 2151042

End: 2151623

Strand: Reverse

Name: 145296032

Synonym: cgR_1954

Alternate gene names: NA

Gene position: 2151623-2151042 (Counterclockwise)

Preceding gene: 145296034

Following gene: 145296031

Centisome position: 64.92

GC content: 48.97

Gene sequence:

>582_bases
TTGGTGAGTAATACCTCCGCGGTGGATTCACTGACAGAGTTTCTGGCAGCAACGCTTAATAAGTATCCAGAGCTCAACGT
TGATTTGGAAGAAGGGTCAAGCAGTGAGGTTGCACGACGGGTTCGAGAAGGCACTGCTGATCTAGGGGTGGTGTCAGTGC
TGGAGTCTCGAACAGGTTTAGAAGCACACTTATTATGGGAAGATCCTTTGATGATTGTCGGCACGTCAGCTAAGACATCA
GTGGAAGCACTAAAGGGTCCAATGATTGGTTTATCTGCTGGGATCCCACTTCAAACCTATATTGATGCGCACCTTGAGAG
AGATGGAATCACTCCCAACTACCGAGTCCGTTTGCCCACGTTAAGTGCGGTTTATGCGGTTGCTAGTACTGGAGGGGGAT
CGGCAATTCTTCCGCTTGGAACTGCGAGGAGATTAGAGGTATGGATAAAGAATGTACTTCCCATCGAGGAACCGTGGGCA
CAACGCGATGCGTGGATGTTGGTGAAGGAAGGGCGCACATTAGCTGACGTAGAAAAATCTTTTATAGACGCCCTGTTGAG
CTTTCGGGACGAGAAATCCTAA

Upstream 100 bases:

>100_bases
CTGAAGCTGGCGAAGTAGTCCTAATTCAAAGCCGGAGACTTCTTGAGCAAGCCGACCTGCTCACTAGTGCTTTCCAACAG
CACCAAAAACGCACATCAAA

Downstream 100 bases:

>100_bases
GTAGAACCCTAAAGGCATAAACCAACATCAGTGGAACTAATTGGATCGGTCGGGCGTTGATTAATCATTAACTCCAACGG
CGGAAAACGGTGGAAAGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator LysR Family; Transcriptional Regulator; LysR Family Regulatory Helix-Turn-Helix Protein; Transcription Regulator Protein; LysR Family Transcription Regulator Protein; LysR Family Regulatory Protein

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MVSNTSAVDSLTEFLAATLNKYPELNVDLEEGSSSEVARRVREGTADLGVVSVLESRTGLEAHLLWEDPLMIVGTSAKTS
VEALKGPMIGLSAGIPLQTYIDAHLERDGITPNYRVRLPTLSAVYAVASTGGGSAILPLGTARRLEVWIKNVLPIEEPWA
QRDAWMLVKEGRTLADVEKSFIDALLSFRDEKS

Sequences:

>Translated_193_residues
MVSNTSAVDSLTEFLAATLNKYPELNVDLEEGSSSEVARRVREGTADLGVVSVLESRTGLEAHLLWEDPLMIVGTSAKTS
VEALKGPMIGLSAGIPLQTYIDAHLERDGITPNYRVRLPTLSAVYAVASTGGGSAILPLGTARRLEVWIKNVLPIEEPWA
QRDAWMLVKEGRTLADVEKSFIDALLSFRDEKS
>Mature_193_residues
MVSNTSAVDSLTEFLAATLNKYPELNVDLEEGSSSEVARRVREGTADLGVVSVLESRTGLEAHLLWEDPLMIVGTSAKTS
VEALKGPMIGLSAGIPLQTYIDAHLERDGITPNYRVRLPTLSAVYAVASTGGGSAILPLGTARRLEVWIKNVLPIEEPWA
QRDAWMLVKEGRTLADVEKSFIDALLSFRDEKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20951; Mature: 20951

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSNTSAVDSLTEFLAATLNKYPELNVDLEEGSSSEVARRVREGTADLGVVSVLESRTGL
CCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCC
EAHLLWEDPLMIVGTSAKTSVEALKGPMIGLSAGIPLQTYIDAHLERDGITPNYRVRLPT
EEEEEECCCEEEEECCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCCCCEEEECCH
LSAVYAVASTGGGSAILPLGTARRLEVWIKNVLPIEEPWAQRDAWMLVKEGRTLADVEKS
HHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHH
FIDALLSFRDEKS
HHHHHHHHHCCCC
>Mature Secondary Structure
MVSNTSAVDSLTEFLAATLNKYPELNVDLEEGSSSEVARRVREGTADLGVVSVLESRTGL
CCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCC
EAHLLWEDPLMIVGTSAKTSVEALKGPMIGLSAGIPLQTYIDAHLERDGITPNYRVRLPT
EEEEEECCCEEEEECCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCCCCEEEECCH
LSAVYAVASTGGGSAILPLGTARRLEVWIKNVLPIEEPWAQRDAWMLVKEGRTLADVEKS
HHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHH
FIDALLSFRDEKS
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA