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The map label for this gene is ftsY [H]

Identifier: 145296027

GI number: 145296027

Start: 2139871

End: 2141631

Strand: Reverse

Name: ftsY [H]

Synonym: cgR_1950

Alternate gene names: 145296027

Gene position: 2141631-2139871 (Counterclockwise)

Preceding gene: 145296028

Following gene: 145296026

Centisome position: 64.62

GC content: 56.96

Gene sequence:

>1761_bases
ATGGATGCAACCTTTTGGATTATTGGACTAGTCCTCCTCGTTATTCTTGCGATCATCATCGTGCTGATCGTGGGCAATCA
ACGAGGAAAATCAAAAACCGTTAGTTTTGAAAAGCCTGAAGAAGAAAAGAAGCAACTCACCCAGCAAGAGAAATCCGGAA
ACTACCAAGCTCAGGGTGGTTTTAACTTTGCGCCAGCCAAGAACGAAGAGCCAGTTCTCCGCGATGACCAGAAGCTTTCC
ACCCAACCACCGGCCACCCCGGTTGTACCACCAGTAGTTCCGCCAGTAGTTCCACCCGCTGCTGATCCAGTCACTGAGCC
ACCGGTTGACACGGCAGAGCCAGGAGCAGCTGCAGAGAAGCCTGCAACCGATGAGTTTGCTGCACAGGCTGAACCAATTG
CCCCGGTTAAACCTGAAAAAGCACCAGAGGAACCATCGGGCGGTGAGCATGCGGTTGATGCAGCTTCTGCAGAGCCAGTT
CCTGAGCCAACTTCTGAGGTGCCTGAGGCGATTTCCCTCGACGTGGCTGAAACACTCAATGCCGCACCCGAAGAAACACC
AGCTGAGCTTGAAGAAGAGCCAGAAGCGGAGGTAGTTCCTGCTGCAGAAGAGGCTCCTGTATTTGAGGAGACCGTCGAAG
AACTCGACGAGCCCGTTGGAGTCGCTGGGATCGAGGCGGCCGAAAACGCTGAAGTCCAGGCGCTGGAATCCGTTGAGGAA
GAAGCAACCGAAGCTGCCGAAGCCGCATCGGTTACCGCCGAGTTCGCAGAGGCTGCCCGCGAGCAGACCCCAGTTCCAGA
CACTGCGCCTGAGCCAGCACCGGCACCAATTGACGACATTGCGCCTGCATCTGGTCGAATCGGCAAACTGCGCACCCGTT
TGTCGCGTTCCCAGAATGTCTTCGGCAAGTCCGTGTTGGGCATTTTATCCGCCGGCGACCTCGATGAGGATGCCTGGGAA
GATATTGAAGCGATGCTGATCAAGGCGGATCTTGGCTCCAAGGTCACCGCGCGCGTGGTCGATAAATTGCGCGACAAGAT
TGCAGAGCGCGGCGTCGGCAGCGAGGCCGAGGCCCGTGCCATGTTGCGCGAGACGCTTATCGACGCCTGTCGCCCCGATC
TTGACCGCTCCATTAAGGCCATGCCTAATGAGGGCAAGCCTGCAGTAGTTTTGGTCGTTGGTGTTAATGGCACAGGTAAG
ACCACAACCACCGGCAAGCTGGCCCGCGTGTTGGTCTCGATGGGGCACAAGGTTGTTTTGGGAGCTGCGGATACCTTCCG
TGCAGCAGCGGCTGATCAGCTTGAAACCTGGGGTCGTCGCGTTGGTGCAGAGACTGTTCGTGGCGCAGAGGGTGCGGATC
CAGCATCGATTGCTTTCGATGCTGTTGCCAAGGGGGTCGAGCGCCAGGCGGACGTCGTGCTCATTGACACCGCCGGTCGC
CTTCACACCTCCACTGGCCTGATGGACCAGTTGGGCAAGGTCAAGCGCGTGGTAGAGAAGAAGGCTGTGGTGGATGAGGT
TCTCTTGGTGCTGGATTCCACTGTTGGCCAAAATGGCATGCAGCAGGCCCGCATTTTCCGTGAGGTTGTAGAAATCACGG
GTGTCGTGCTCACCAAGTTGGATGGCACGGCCAAGGGTGGCATTGTCTTCCAAGTTCAGGAAGAGCTGGGTGTTCCCGTC
AAGCTTGTTGGCCTTGGTGAGGGGGCTGATGATCTCGCACCATTTGAGGTCGAGGGCTTTGTTGACGCTTTGCTTGGCTA
A

Upstream 100 bases:

>100_bases
TCCAAACAATCACGTTCTAGCGTCTTGGCCACCATCGAATTTTCTGCCATTTGTGCAGGTAGTAAGGCCGGACAGATGCT
GAACTGTTAAGGTGGTGGGC

Downstream 100 bases:

>100_bases
GGAACGGATTCTTTAGACGCTCGCACACATGGGGTGGTGTCGCTGAAAATTCAGCAACACCACCCCATGTTTTTGTGCTC
AACCTGGTCAGGTTAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 586; Mature: 586

Protein sequence:

>586_residues
MDATFWIIGLVLLVILAIIIVLIVGNQRGKSKTVSFEKPEEEKKQLTQQEKSGNYQAQGGFNFAPAKNEEPVLRDDQKLS
TQPPATPVVPPVVPPVVPPAADPVTEPPVDTAEPGAAAEKPATDEFAAQAEPIAPVKPEKAPEEPSGGEHAVDAASAEPV
PEPTSEVPEAISLDVAETLNAAPEETPAELEEEPEAEVVPAAEEAPVFEETVEELDEPVGVAGIEAAENAEVQALESVEE
EATEAAEAASVTAEFAEAAREQTPVPDTAPEPAPAPIDDIAPASGRIGKLRTRLSRSQNVFGKSVLGILSAGDLDEDAWE
DIEAMLIKADLGSKVTARVVDKLRDKIAERGVGSEAEARAMLRETLIDACRPDLDRSIKAMPNEGKPAVVLVVGVNGTGK
TTTTGKLARVLVSMGHKVVLGAADTFRAAAADQLETWGRRVGAETVRGAEGADPASIAFDAVAKGVERQADVVLIDTAGR
LHTSTGLMDQLGKVKRVVEKKAVVDEVLLVLDSTVGQNGMQQARIFREVVEITGVVLTKLDGTAKGGIVFQVQEELGVPV
KLVGLGEGADDLAPFEVEGFVDALLG

Sequences:

>Translated_586_residues
MDATFWIIGLVLLVILAIIIVLIVGNQRGKSKTVSFEKPEEEKKQLTQQEKSGNYQAQGGFNFAPAKNEEPVLRDDQKLS
TQPPATPVVPPVVPPVVPPAADPVTEPPVDTAEPGAAAEKPATDEFAAQAEPIAPVKPEKAPEEPSGGEHAVDAASAEPV
PEPTSEVPEAISLDVAETLNAAPEETPAELEEEPEAEVVPAAEEAPVFEETVEELDEPVGVAGIEAAENAEVQALESVEE
EATEAAEAASVTAEFAEAAREQTPVPDTAPEPAPAPIDDIAPASGRIGKLRTRLSRSQNVFGKSVLGILSAGDLDEDAWE
DIEAMLIKADLGSKVTARVVDKLRDKIAERGVGSEAEARAMLRETLIDACRPDLDRSIKAMPNEGKPAVVLVVGVNGTGK
TTTTGKLARVLVSMGHKVVLGAADTFRAAAADQLETWGRRVGAETVRGAEGADPASIAFDAVAKGVERQADVVLIDTAGR
LHTSTGLMDQLGKVKRVVEKKAVVDEVLLVLDSTVGQNGMQQARIFREVVEITGVVLTKLDGTAKGGIVFQVQEELGVPV
KLVGLGEGADDLAPFEVEGFVDALLG
>Mature_586_residues
MDATFWIIGLVLLVILAIIIVLIVGNQRGKSKTVSFEKPEEEKKQLTQQEKSGNYQAQGGFNFAPAKNEEPVLRDDQKLS
TQPPATPVVPPVVPPVVPPAADPVTEPPVDTAEPGAAAEKPATDEFAAQAEPIAPVKPEKAPEEPSGGEHAVDAASAEPV
PEPTSEVPEAISLDVAETLNAAPEETPAELEEEPEAEVVPAAEEAPVFEETVEELDEPVGVAGIEAAENAEVQALESVEE
EATEAAEAASVTAEFAEAAREQTPVPDTAPEPAPAPIDDIAPASGRIGKLRTRLSRSQNVFGKSVLGILSAGDLDEDAWE
DIEAMLIKADLGSKVTARVVDKLRDKIAERGVGSEAEARAMLRETLIDACRPDLDRSIKAMPNEGKPAVVLVVGVNGTGK
TTTTGKLARVLVSMGHKVVLGAADTFRAAAADQLETWGRRVGAETVRGAEGADPASIAFDAVAKGVERQADVVLIDTAGR
LHTSTGLMDQLGKVKRVVEKKAVVDEVLLVLDSTVGQNGMQQARIFREVVEITGVVLTKLDGTAKGGIVFQVQEELGVPV
KLVGLGEGADDLAPFEVEGFVDALLG

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=262, Percent_Identity=31.2977099236641, Blast_Score=132, Evalue=1e-30,
Organism=Homo sapiens, GI226371618, Length=236, Percent_Identity=32.6271186440678, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI295424842, Length=305, Percent_Identity=30.1639344262295, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI23308697, Length=305, Percent_Identity=30.1639344262295, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI89061728, Length=134, Percent_Identity=32.089552238806, Blast_Score=81, Evalue=2e-15,
Organism=Escherichia coli, GI1789874, Length=319, Percent_Identity=37.9310344827586, Blast_Score=221, Evalue=7e-59,
Organism=Escherichia coli, GI1788963, Length=307, Percent_Identity=33.5504885993485, Blast_Score=139, Evalue=5e-34,
Organism=Caenorhabditis elegans, GI17539958, Length=280, Percent_Identity=30, Blast_Score=125, Evalue=6e-29,
Organism=Caenorhabditis elegans, GI193206261, Length=303, Percent_Identity=33.003300330033, Blast_Score=120, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6325345, Length=291, Percent_Identity=28.8659793814433, Blast_Score=136, Evalue=7e-33,
Organism=Saccharomyces cerevisiae, GI6320498, Length=293, Percent_Identity=29.6928327645051, Blast_Score=94, Evalue=7e-20,
Organism=Drosophila melanogaster, GI17647949, Length=268, Percent_Identity=32.089552238806, Blast_Score=122, Evalue=8e-28,
Organism=Drosophila melanogaster, GI24641198, Length=319, Percent_Identity=27.8996865203762, Blast_Score=107, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 61451; Mature: 61451

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: PS00216 SUGAR_TRANSPORT_1 ; PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDATFWIIGLVLLVILAIIIVLIVGNQRGKSKTVSFEKPEEEKKQLTQQEKSGNYQAQGG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCC
FNFAPAKNEEPVLRDDQKLSTQPPATPVVPPVVPPVVPPAADPVTEPPVDTAEPGAAAEK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PATDEFAAQAEPIAPVKPEKAPEEPSGGEHAVDAASAEPVPEPTSEVPEAISLDVAETLN
CCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHC
AAPEETPAELEEEPEAEVVPAAEEAPVFEETVEELDEPVGVAGIEAAENAEVQALESVEE
CCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
EATEAAEAASVTAEFAEAAREQTPVPDTAPEPAPAPIDDIAPASGRIGKLRTRLSRSQNV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH
FGKSVLGILSAGDLDEDAWEDIEAMLIKADLGSKVTARVVDKLRDKIAERGVGSEAEARA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
MLRETLIDACRPDLDRSIKAMPNEGKPAVVLVVGVNGTGKTTTTGKLARVLVSMGHKVVL
HHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEE
GAADTFRAAAADQLETWGRRVGAETVRGAEGADPASIAFDAVAKGVERQADVVLIDTAGR
ECCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC
LHTSTGLMDQLGKVKRVVEKKAVVDEVLLVLDSTVGQNGMQQARIFREVVEITGVVLTKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
DGTAKGGIVFQVQEELGVPVKLVGLGEGADDLAPFEVEGFVDALLG
CCCCCCCEEEEEHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MDATFWIIGLVLLVILAIIIVLIVGNQRGKSKTVSFEKPEEEKKQLTQQEKSGNYQAQGG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCC
FNFAPAKNEEPVLRDDQKLSTQPPATPVVPPVVPPVVPPAADPVTEPPVDTAEPGAAAEK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PATDEFAAQAEPIAPVKPEKAPEEPSGGEHAVDAASAEPVPEPTSEVPEAISLDVAETLN
CCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHC
AAPEETPAELEEEPEAEVVPAAEEAPVFEETVEELDEPVGVAGIEAAENAEVQALESVEE
CCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
EATEAAEAASVTAEFAEAAREQTPVPDTAPEPAPAPIDDIAPASGRIGKLRTRLSRSQNV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH
FGKSVLGILSAGDLDEDAWEDIEAMLIKADLGSKVTARVVDKLRDKIAERGVGSEAEARA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
MLRETLIDACRPDLDRSIKAMPNEGKPAVVLVVGVNGTGKTTTTGKLARVLVSMGHKVVL
HHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEE
GAADTFRAAAADQLETWGRRVGAETVRGAEGADPASIAFDAVAKGVERQADVVLIDTAGR
ECCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC
LHTSTGLMDQLGKVKRVVEKKAVVDEVLLVLDSTVGQNGMQQARIFREVVEITGVVLTKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
DGTAKGGIVFQVQEELGVPVKLVGLGEGADDLAPFEVEGFVDALLG
CCCCCCCEEEEEHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]