Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145296015
Identifier: 145296015
GI number: 145296015
Start: 2126924
End: 2127559
Strand: Direct
Name: 145296015
Synonym: cgR_1938
Alternate gene names: NA
Gene position: 2126924-2127559 (Clockwise)
Preceding gene: 145296011
Following gene: 145296017
Centisome position: 64.18
GC content: 53.77
Gene sequence:
>636_bases ATGAAGCCTCACACACTTTTGCGACAAGCTTTAGCAATCGGCAGCGTGGGTGGGCTCTTGGTGCTCAGTGCCTGTGGCAA TTCTGATTCAACTTCTCCTACTGTTTCGGAAACTGTCACAGAAATTGTCACTGAAACTTCGGTCCCTGATTCCACGGCAG CCTCGATAGAATCTTCGCTTGCTACCTCTTCAGATGCTGTGCCTTCAGAAGTCGTGCCCAAGCAATGCGCAACCTCGGAA CTCAACATCTCAACTGGTACGCAACAAGGCGCTGCAGGAAGCGTGCTGATTGACCTGAACTTCACCAATGCTGGCTCCAC AGACTGCACACTCCATGGCTTTCCGGGCGTGAGCTTTGTGGGAATGGATAACGGCACGCAGATTGGCGCGCCAGCGGTTC GGGAAGGAGACGCCTTCCCTGCGGTCACGCTTGGACCCGGTGAGAACACAATCGCCGCTCTGAAAATTTCCAGGGCAGAA AACTACGACTCGGCCGCATGCTCACTGCAACCAGTTGATGGGCTACGCGTCTACCCGCCAGGTGAAACCGCATCCGCATA TCTTCCGCTGGAAGGATTCAATGGATGCGACAATGATGGTCTTGAGCTGCTGACTATTAAATCTGTCGGAGCCTAA
Upstream 100 bases:
>100_bases TCGGGGAAAATGGTCACGACATCAAGCCGCAGACGGTGGGAATCAAGATTTTCGGAGCTAGTCACGGACTTCAATCTACC AAGAGGTCTACGCTGGAGGC
Downstream 100 bases:
>100_bases AGATCTAACAAGCCCTCTGGAGGGGTGATCGTTGCGGTTCCTTCTTCCAGATCCACCTCAGGAACAATGGCGTGCACAAA AGGAATCAGTGTTTCCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Lipoprotein; Lipoprotein
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MKPHTLLRQALAIGSVGGLLVLSACGNSDSTSPTVSETVTEIVTETSVPDSTAASIESSLATSSDAVPSEVVPKQCATSE LNISTGTQQGAAGSVLIDLNFTNAGSTDCTLHGFPGVSFVGMDNGTQIGAPAVREGDAFPAVTLGPGENTIAALKISRAE NYDSAACSLQPVDGLRVYPPGETASAYLPLEGFNGCDNDGLELLTIKSVGA
Sequences:
>Translated_211_residues MKPHTLLRQALAIGSVGGLLVLSACGNSDSTSPTVSETVTEIVTETSVPDSTAASIESSLATSSDAVPSEVVPKQCATSE LNISTGTQQGAAGSVLIDLNFTNAGSTDCTLHGFPGVSFVGMDNGTQIGAPAVREGDAFPAVTLGPGENTIAALKISRAE NYDSAACSLQPVDGLRVYPPGETASAYLPLEGFNGCDNDGLELLTIKSVGA >Mature_211_residues MKPHTLLRQALAIGSVGGLLVLSACGNSDSTSPTVSETVTEIVTETSVPDSTAASIESSLATSSDAVPSEVVPKQCATSE LNISTGTQQGAAGSVLIDLNFTNAGSTDCTLHGFPGVSFVGMDNGTQIGAPAVREGDAFPAVTLGPGENTIAALKISRAE NYDSAACSLQPVDGLRVYPPGETASAYLPLEGFNGCDNDGLELLTIKSVGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21276; Mature: 21276
Theoretical pI: Translated: 3.91; Mature: 3.91
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPHTLLRQALAIGSVGGLLVLSACGNSDSTSPTVSETVTEIVTETSVPDSTAASIESSL CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH ATSSDAVPSEVVPKQCATSELNISTGTQQGAAGSVLIDLNFTNAGSTDCTLHGFPGVSFV CCCCCCCCHHHCCHHHCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCEEEE GMDNGTQIGAPAVREGDAFPAVTLGPGENTIAALKISRAENYDSAACSLQPVDGLRVYPP ECCCCCEECCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCEEEECCCCCEEEECC GETASAYLPLEGFNGCDNDGLELLTIKSVGA CCCCEEEEECCCCCCCCCCCEEEEEEEECCC >Mature Secondary Structure MKPHTLLRQALAIGSVGGLLVLSACGNSDSTSPTVSETVTEIVTETSVPDSTAASIESSL CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH ATSSDAVPSEVVPKQCATSELNISTGTQQGAAGSVLIDLNFTNAGSTDCTLHGFPGVSFV CCCCCCCCHHHCCHHHCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCEEEE GMDNGTQIGAPAVREGDAFPAVTLGPGENTIAALKISRAENYDSAACSLQPVDGLRVYPP ECCCCCEECCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCEEEECCCCCEEEECC GETASAYLPLEGFNGCDNDGLELLTIKSVGA CCCCEEEEECCCCCCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA