Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145295994
Identifier: 145295994
GI number: 145295994
Start: 2109127
End: 2109909
Strand: Reverse
Name: 145295994
Synonym: cgR_1918
Alternate gene names: NA
Gene position: 2109909-2109127 (Counterclockwise)
Preceding gene: 145295995
Following gene: 145295993
Centisome position: 63.66
GC content: 52.75
Gene sequence:
>783_bases ATGAGTATTCAACCGTTTAACTTTCAGGGACATGAAGTCCGCGTGGTCCAGGGGCAAGATGGTCAACCGCTCTGGGTAGC AATCGATGTTTCGAGAGTCTTAGGTTTCTCCGAAGCTTCAGCGATGACACGTCACCTTGATGATGAGGAAAAGGGTCTGT CTAGTTGGCAGACCCCCGGTGGATCACAGCAGATGATCACAATCACCGAGTCTGGTCTTTACTCAGCAATCCTTCGAAGT CGTAAGCCTGAGGCGAAAGAGTTCAAGCGCTGGGTCACTGGTGAAGTCTTGCCATCGATTCGCCGCCATGGTGGGTATCT CACTGATCAGAAGATTGCTGAAGCTTTGGACGATCCGGACACCATCATCCGACTCGCCACCTCGTTGAAAGAGGAGCGTG CGCGCCGGGCGGCTCTAGAGACTCAGCAAAAGATTGATGCTCCGAAGGTGGTATTCGCTGACGCGGTAGCGGTATCAAAC ACTGCAATCCTTGTCGGTGACCTCGCGAAGCTACTCAAAGGCAACGGAATCAACGTTGGTGCTAATCGACTGTTCGATTG GCTGCGTGAGAACGGCTACCTCATTCGTCGTAAAGGGACGGACTGGAACATGCCAACCCAGAAATCCATGGATCTCGAGT TGCTTCGCGTGAAGGAGACCGTCATCACTCACAGCGACGGACACACATCCATTAACAAAACACCGAAGGTGACCGGTAAA GGCCAACGCTACTTCGTTGAACGGTTCCTCGACGGCCGATTCCACATCAACAACGCCGCATAA
Upstream 100 bases:
>100_bases GCCTTACTCCCGAGGAAGATCAGCAGCTCATTAGGATCAACGCCCTTATCAGCAAAGTTACCCGTCAGATTCGCATTGTC ACTGAGGGAGCAGCAAAACA
Downstream 100 bases:
>100_bases AAAGCCCGTCTAGCAGGCAGAGGAGTGCAAGCCTCCTCACGGGCACTCAGTCCCTGGGACTAGCGACCACCCAACACAGG GTGTGGGGTCGCGCCGGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MSIQPFNFQGHEVRVVQGQDGQPLWVAIDVSRVLGFSEASAMTRHLDDEEKGLSSWQTPGGSQQMITITESGLYSAILRS RKPEAKEFKRWVTGEVLPSIRRHGGYLTDQKIAEALDDPDTIIRLATSLKEERARRAALETQQKIDAPKVVFADAVAVSN TAILVGDLAKLLKGNGINVGANRLFDWLRENGYLIRRKGTDWNMPTQKSMDLELLRVKETVITHSDGHTSINKTPKVTGK GQRYFVERFLDGRFHINNAA
Sequences:
>Translated_260_residues MSIQPFNFQGHEVRVVQGQDGQPLWVAIDVSRVLGFSEASAMTRHLDDEEKGLSSWQTPGGSQQMITITESGLYSAILRS RKPEAKEFKRWVTGEVLPSIRRHGGYLTDQKIAEALDDPDTIIRLATSLKEERARRAALETQQKIDAPKVVFADAVAVSN TAILVGDLAKLLKGNGINVGANRLFDWLRENGYLIRRKGTDWNMPTQKSMDLELLRVKETVITHSDGHTSINKTPKVTGK GQRYFVERFLDGRFHINNAA >Mature_259_residues SIQPFNFQGHEVRVVQGQDGQPLWVAIDVSRVLGFSEASAMTRHLDDEEKGLSSWQTPGGSQQMITITESGLYSAILRSR KPEAKEFKRWVTGEVLPSIRRHGGYLTDQKIAEALDDPDTIIRLATSLKEERARRAALETQQKIDAPKVVFADAVAVSNT AILVGDLAKLLKGNGINVGANRLFDWLRENGYLIRRKGTDWNMPTQKSMDLELLRVKETVITHSDGHTSINKTPKVTGKG QRYFVERFLDGRFHINNAA
Specific function: Unknown
COG id: COG3645
COG function: function code S; Uncharacterized phage-encoded protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Bro-N domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003497 - InterPro: IPR018876 [H]
Pfam domain/function: PF02498 Bro-N; PF10548 P22_AR_C [H]
EC number: NA
Molecular weight: Translated: 29097; Mature: 28966
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIQPFNFQGHEVRVVQGQDGQPLWVAIDVSRVLGFSEASAMTRHLDDEEKGLSSWQTPG CCCCCCCCCCCEEEEEECCCCCEEEEEEEHHHHHCCHHHHHHHHHCCCHHHHHHHCCCCC GSQQMITITESGLYSAILRSRKPEAKEFKRWVTGEVLPSIRRHGGYLTDQKIAEALDDPD CCCEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHH TIIRLATSLKEERARRAALETQQKIDAPKVVFADAVAVSNTAILVGDLAKLLKGNGINVG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCEEHHHHHHHHHCCCCCCCC ANRLFDWLRENGYLIRRKGTDWNMPTQKSMDLELLRVKETVITHSDGHTSINKTPKVTGK HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCC GQRYFVERFLDGRFHINNAA CHHHHHHHHHCCEEEECCCC >Mature Secondary Structure SIQPFNFQGHEVRVVQGQDGQPLWVAIDVSRVLGFSEASAMTRHLDDEEKGLSSWQTPG CCCCCCCCCCEEEEEECCCCCEEEEEEEHHHHHCCHHHHHHHHHCCCHHHHHHHCCCCC GSQQMITITESGLYSAILRSRKPEAKEFKRWVTGEVLPSIRRHGGYLTDQKIAEALDDPD CCCEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHH TIIRLATSLKEERARRAALETQQKIDAPKVVFADAVAVSNTAILVGDLAKLLKGNGINVG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCEEHHHHHHHHHCCCCCCCC ANRLFDWLRENGYLIRRKGTDWNMPTQKSMDLELLRVKETVITHSDGHTSINKTPKVTGK HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCC GQRYFVERFLDGRFHINNAA CHHHHHHHHHCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]