Definition | Corynebacterium glutamicum R chromosome, complete genome. |
---|---|
Accession | NC_009342 |
Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is 145295955
Identifier: 145295955
GI number: 145295955
Start: 2078984
End: 2079568
Strand: Reverse
Name: 145295955
Synonym: cgR_1879
Alternate gene names: NA
Gene position: 2079568-2078984 (Counterclockwise)
Preceding gene: 145295956
Following gene: 145295954
Centisome position: 62.75
GC content: 52.31
Gene sequence:
>585_bases ATGAAGCTTTACCCGTTTGATGTGCCTGAGGGGTTTCATCCGAATATTTGGTGGCTCATGGGATTTGGCCTGACCGTGGA GCAGGCTAATGCGTTGGCTCGGCACTTGAGTGATGATTTGGGTGTCCGGCTTGGTGAGGATAGTGGCGAGGTCACTGTTT CCTGGGCGGTCGGATTGGTTGGTGTGTGGGAGGATCGGATCATTGCAAACGTGGATGATCCGGTGGATATTACGATTTCT GAATCTTCTGCCGTGAGAATCACCGGAGGGGCGCTACCACCCGGTGTGAAACTTGAAAAGCACTCTGGAAAGCTGGTTGG GAGCCTTACTCATAGTGGGCTTTATTCCGTCACTGTGACGATTGGCCCAGCTGTGAAGTATGACCCATTGGGGACTCCTG GTGGGCCAAGTGATCCCGGTATGTGGATTCCAATTAATCAACCACGCCAACAGGTGACAACCGCGCTGAGTAATTTTCCG GCCACTGCCGATGATCTCAGTGATCGAGAAAAAGACTATTTACTTGCTGAGCTTTTAGCGTGGCAGGCAGGGGAAACAGT GAAGGAGGCTGACCGTGGGGATTAA
Upstream 100 bases:
>100_bases AGCGCTTGCCGATCCTGAGGCGCTGCTGGCTGCGAATGCCGCAACTGTTCGCTCTGTTGTAGGGCGTTTGACTACGTCCG TGAATTCTTAGGAGGGCATG
Downstream 100 bases:
>100_bases ACCATCAGGCGACTCACCCATTATTGTGCCACCCGATAACCCGCAAAACCGTTGGGGTGAGTGGGAAGCAGACCTTCGTG AAACCGGAGAAGTAGCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKLYPFDVPEGFHPNIWWLMGFGLTVEQANALARHLSDDLGVRLGEDSGEVTVSWAVGLVGVWEDRIIANVDDPVDITIS ESSAVRITGGALPPGVKLEKHSGKLVGSLTHSGLYSVTVTIGPAVKYDPLGTPGGPSDPGMWIPINQPRQQVTTALSNFP ATADDLSDREKDYLLAELLAWQAGETVKEADRGD
Sequences:
>Translated_194_residues MKLYPFDVPEGFHPNIWWLMGFGLTVEQANALARHLSDDLGVRLGEDSGEVTVSWAVGLVGVWEDRIIANVDDPVDITIS ESSAVRITGGALPPGVKLEKHSGKLVGSLTHSGLYSVTVTIGPAVKYDPLGTPGGPSDPGMWIPINQPRQQVTTALSNFP ATADDLSDREKDYLLAELLAWQAGETVKEADRGD >Mature_194_residues MKLYPFDVPEGFHPNIWWLMGFGLTVEQANALARHLSDDLGVRLGEDSGEVTVSWAVGLVGVWEDRIIANVDDPVDITIS ESSAVRITGGALPPGVKLEKHSGKLVGSLTHSGLYSVTVTIGPAVKYDPLGTPGGPSDPGMWIPINQPRQQVTTALSNFP ATADDLSDREKDYLLAELLAWQAGETVKEADRGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20818; Mature: 20818
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLYPFDVPEGFHPNIWWLMGFGLTVEQANALARHLSDDLGVRLGEDSGEVTVSWAVGLV CCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCEEECCCCCCEEEEEEEEEE GVWEDRIIANVDDPVDITISESSAVRITGGALPPGVKLEKHSGKLVGSLTHSGLYSVTVT EECCCEEEECCCCCEEEEECCCCEEEEECCCCCCCCEEECCCCCEEEEEECCCEEEEEEE IGPAVKYDPLGTPGGPSDPGMWIPINQPRQQVTTALSNFPATADDLSDREKDYLLAELLA ECCCEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHH WQAGETVKEADRGD HCCCCHHHHHCCCC >Mature Secondary Structure MKLYPFDVPEGFHPNIWWLMGFGLTVEQANALARHLSDDLGVRLGEDSGEVTVSWAVGLV CCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCEEECCCCCCEEEEEEEEEE GVWEDRIIANVDDPVDITISESSAVRITGGALPPGVKLEKHSGKLVGSLTHSGLYSVTVT EECCCEEEECCCCCEEEEECCCCEEEEECCCCCCCCEEECCCCCEEEEEECCCEEEEEEE IGPAVKYDPLGTPGGPSDPGMWIPINQPRQQVTTALSNFPATADDLSDREKDYLLAELLA ECCCEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHH WQAGETVKEADRGD HCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA