Click here to switch to the map view.

The map label for this gene is smf [C]

Identifier: 145295932

GI number: 145295932

Start: 2061867

End: 2063051

Strand: Reverse

Name: smf [C]

Synonym: cgR_1857

Alternate gene names: 145295932

Gene position: 2063051-2061867 (Counterclockwise)

Preceding gene: 145295933

Following gene: 145295931

Centisome position: 62.25

GC content: 52.83

Gene sequence:

>1185_bases
ATGATTGACTCCCGCTTGCTGGCATGGGCGTATCTCTCAAAAGTGGTGGAGGGTCCCAATGCACACCTGCAAAAGCTCCT
GAAAGAAGGTCATGATGTAGAGCGGATCGCATTTGGTATTAAACACCGCGAAGAGTGGATTGGCGAAGGTCTGCTGAAAA
ACACCGATTCCCGGTACTCGATTGATACCGCGCAAACTGATCTGGAAACTATCGCCAAACTCGGTGGGCGGCTCATCACA
CCTGAAGACGACGAATGGCCGATGGAAGAATTAGACCATGCTTTTGGATTTGCCGCTTCTGGCATGAGTGATCATGTGCG
TACCTATCAAGATGATGCGCTGCCACCGCATGCGTTGTGGATTAGGGGAGGAAATCTCAGAACACTCAGTGCACAGTCCG
TCACACTCGTGGGCACCAGGGCAATAAGCCAATATGGCACGGAGGTAACTCGGGAATTCACCCAAAACCTTGTGTCTCAT
CAGTGGACAATCATCTCAGGTGGTGCCTTGGGAGTTGATAGCGTCGCCCATAGTGAAGCCGTACGTGCACAAGGCTCCAC
CATCGCGATCGCAGCATGCGGATTGGATCGCTCGTACCCCAGCCACAATCGAGATCTGTTCAACCAGATTGCCAAATCCG
GAAAGGGGGCGTTGGTGAGTGAATATCCACCGGGAACTCCACCTCAACGCCACCGCTTTCTTACCCGCAATCGTCTTGTT
GCTGCTCTGTCTCAAGGAACTGTCGTGGTGGAGGCAGCCTGGAGGTCAGGCGCGCTAAACACTTTGAGCTGGTGTGCTGG
TTTAGGCAGGATTGCTATGGCGGTCCCTGGGCCGGTAAATACTGCTGGATCACTTGGGTGCCACGAAAGGATTCGAAACG
GCAGCGCACAAATGGTCACCAGTGCGGATGACGTTCGGTCACTTCTGGGTGCAGTGGGTGCAATGGATAGCCAAACTCAG
TATGAATTAAACTTCGCGGCCACTCCAGTACAGGGTTTAACCAGAAATGAGCTGCGAGTTTTTGATGCGTTAGACGACCG
AGGAGAGGGGAGGGAAGCGGCGAGTATCGCTACCGAAGCCGGGTTGACCTTGCAGTTAACAATTTTCCTTCTCATTGCAT
TGAACAAGCGCGGAATCGTGAAACGCGACGGAACTGCTTGGTTGAGAAATGCGGAAATGCCATAA

Upstream 100 bases:

>100_bases
GTTGGACCTTGTGCGATTTGGATGGGGAACAGCAGCCCAATCTTGACCATATTGCGCGAGCCATGGAGCTTCGGGGCACT
GCATACAGCGAGGTAGCAGC

Downstream 100 bases:

>100_bases
AACCTGGGGGTTATATAAAAAACTTCACAAAAAGGTTGCATCCGCATCAACCGAAAGATAGTGTGTGTGAGGCAAGCCTA
AGTAAACTTCTTCAAGGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MIDSRLLAWAYLSKVVEGPNAHLQKLLKEGHDVERIAFGIKHREEWIGEGLLKNTDSRYSIDTAQTDLETIAKLGGRLIT
PEDDEWPMEELDHAFGFAASGMSDHVRTYQDDALPPHALWIRGGNLRTLSAQSVTLVGTRAISQYGTEVTREFTQNLVSH
QWTIISGGALGVDSVAHSEAVRAQGSTIAIAACGLDRSYPSHNRDLFNQIAKSGKGALVSEYPPGTPPQRHRFLTRNRLV
AALSQGTVVVEAAWRSGALNTLSWCAGLGRIAMAVPGPVNTAGSLGCHERIRNGSAQMVTSADDVRSLLGAVGAMDSQTQ
YELNFAATPVQGLTRNELRVFDALDDRGEGREAASIATEAGLTLQLTIFLLIALNKRGIVKRDGTAWLRNAEMP

Sequences:

>Translated_394_residues
MIDSRLLAWAYLSKVVEGPNAHLQKLLKEGHDVERIAFGIKHREEWIGEGLLKNTDSRYSIDTAQTDLETIAKLGGRLIT
PEDDEWPMEELDHAFGFAASGMSDHVRTYQDDALPPHALWIRGGNLRTLSAQSVTLVGTRAISQYGTEVTREFTQNLVSH
QWTIISGGALGVDSVAHSEAVRAQGSTIAIAACGLDRSYPSHNRDLFNQIAKSGKGALVSEYPPGTPPQRHRFLTRNRLV
AALSQGTVVVEAAWRSGALNTLSWCAGLGRIAMAVPGPVNTAGSLGCHERIRNGSAQMVTSADDVRSLLGAVGAMDSQTQ
YELNFAATPVQGLTRNELRVFDALDDRGEGREAASIATEAGLTLQLTIFLLIALNKRGIVKRDGTAWLRNAEMP
>Mature_394_residues
MIDSRLLAWAYLSKVVEGPNAHLQKLLKEGHDVERIAFGIKHREEWIGEGLLKNTDSRYSIDTAQTDLETIAKLGGRLIT
PEDDEWPMEELDHAFGFAASGMSDHVRTYQDDALPPHALWIRGGNLRTLSAQSVTLVGTRAISQYGTEVTREFTQNLVSH
QWTIISGGALGVDSVAHSEAVRAQGSTIAIAACGLDRSYPSHNRDLFNQIAKSGKGALVSEYPPGTPPQRHRFLTRNRLV
AALSQGTVVVEAAWRSGALNTLSWCAGLGRIAMAVPGPVNTAGSLGCHERIRNGSAQMVTSADDVRSLLGAVGAMDSQTQ
YELNFAATPVQGLTRNELRVFDALDDRGEGREAASIATEAGLTLQLTIFLLIALNKRGIVKRDGTAWLRNAEMP

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994932, Length=190, Percent_Identity=40, Blast_Score=122, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 42702; Mature: 42702

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDSRLLAWAYLSKVVEGPNAHLQKLLKEGHDVERIAFGIKHREEWIGEGLLKNTDSRYS
CCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE
IDTAQTDLETIAKLGGRLITPEDDEWPMEELDHAFGFAASGMSDHVRTYQDDALPPHALW
CCHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEE
IRGGNLRTLSAQSVTLVGTRAISQYGTEVTREFTQNLVSHQWTIISGGALGVDSVAHSEA
EECCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHH
VRAQGSTIAIAACGLDRSYPSHNRDLFNQIAKSGKGALVSEYPPGTPPQRHRFLTRNRLV
HHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHH
AALSQGTVVVEAAWRSGALNTLSWCAGLGRIAMAVPGPVNTAGSLGCHERIRNGSAQMVT
HHHCCCCEEEEECCCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHCCCCCEEEE
SADDVRSLLGAVGAMDSQTQYELNFAATPVQGLTRNELRVFDALDDRGEGREAASIATEA
CHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCHHEEECCCCCCCCCCHHHHHHHHC
GLTLQLTIFLLIALNKRGIVKRDGTAWLRNAEMP
CCHHHEEHHHHHHHCCCCCEEECCCHHHCCCCCC
>Mature Secondary Structure
MIDSRLLAWAYLSKVVEGPNAHLQKLLKEGHDVERIAFGIKHREEWIGEGLLKNTDSRYS
CCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE
IDTAQTDLETIAKLGGRLITPEDDEWPMEELDHAFGFAASGMSDHVRTYQDDALPPHALW
CCHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEE
IRGGNLRTLSAQSVTLVGTRAISQYGTEVTREFTQNLVSHQWTIISGGALGVDSVAHSEA
EECCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHH
VRAQGSTIAIAACGLDRSYPSHNRDLFNQIAKSGKGALVSEYPPGTPPQRHRFLTRNRLV
HHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHH
AALSQGTVVVEAAWRSGALNTLSWCAGLGRIAMAVPGPVNTAGSLGCHERIRNGSAQMVT
HHHCCCCEEEEECCCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHCCCCCEEEE
SADDVRSLLGAVGAMDSQTQYELNFAATPVQGLTRNELRVFDALDDRGEGREAASIATEA
CHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCHHEEECCCCCCCCCCHHHHHHHHC
GLTLQLTIFLLIALNKRGIVKRDGTAWLRNAEMP
CCHHHEEHHHHHHHCCCCCEEECCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]