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The map label for this gene is rimP

Identifier: 145295892

GI number: 145295892

Start: 2017439

End: 2017975

Strand: Reverse

Name: rimP

Synonym: cgR_1817

Alternate gene names: 145295892

Gene position: 2017975-2017439 (Counterclockwise)

Preceding gene: 145295898

Following gene: 145295891

Centisome position: 60.89

GC content: 56.61

Gene sequence:

>537_bases
ATGGCTTTTCCAACCACTGAAATTCTGTCTGCGCTCATCGAGCCGCTCGCCGCATCCCACAAATTCGACCTCGAGGGCCT
GAAAGTAACCAAAGCGGGTCCAAAATCCGCCGTCGCCATCAAGGTAGATTCGGATTCCCGCCCCGATCTCGACCAGCTGG
AAGTATTCAGCCAAGAAATCGGAGAGCTTTTCGACGCCGCCGAGCAGCGCGGAGAGCTCAACTTCGGAGCGGGTTACACG
CTCGAAGTGTCCACGCCGGGCGTGGACAACCCACTGACGCTGCCGCGCCATTGGCGCAGAAACCGTGGTCGCCTGGTTGC
GCTTGATCAGGATGGCAGAAAGCGCGTAGCACGCATCGGGGCGCTTAACGACGCCGAAACTCACGTTGTTTTGATCGAGC
GGAATAAAAAGTTGCTCGAGGTCACAACCCTTGAATTAGCACATTCCCCTCGAGCAGTGGTAGAAATTGAATTCGCTAAA
CCTGCGCAGGATGAGACTGCCCTCGCAGAAAGCACATTCGACGAAGCCACCGCGTAA

Upstream 100 bases:

>100_bases
CAGCCAGAAGAGAAACACCAAGGACAGAGGGGATACGCCTACGCATGGCTTCACAGTGTAATAGCCTGATAATTTTTGCC
GGCAGGTTATCCTTGTCTTT

Downstream 100 bases:

>100_bases
ACAGTACGTGGTGGAAGCTTGAGAGGAAGACAAGTGAATATTGATGTCCAGGCTTTAAAAGCCATCGAGTCTGAAAAAGG
AATCCCAGTTCCAGACTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MAFPTTEILSALIEPLAASHKFDLEGLKVTKAGPKSAVAIKVDSDSRPDLDQLEVFSQEIGELFDAAEQRGELNFGAGYT
LEVSTPGVDNPLTLPRHWRRNRGRLVALDQDGRKRVARIGALNDAETHVVLIERNKKLLEVTTLELAHSPRAVVEIEFAK
PAQDETALAESTFDEATA

Sequences:

>Translated_178_residues
MAFPTTEILSALIEPLAASHKFDLEGLKVTKAGPKSAVAIKVDSDSRPDLDQLEVFSQEIGELFDAAEQRGELNFGAGYT
LEVSTPGVDNPLTLPRHWRRNRGRLVALDQDGRKRVARIGALNDAETHVVLIERNKKLLEVTTLELAHSPRAVVEIEFAK
PAQDETALAESTFDEATA
>Mature_177_residues
AFPTTEILSALIEPLAASHKFDLEGLKVTKAGPKSAVAIKVDSDSRPDLDQLEVFSQEIGELFDAAEQRGELNFGAGYTL
EVSTPGVDNPLTLPRHWRRNRGRLVALDQDGRKRVARIGALNDAETHVVLIERNKKLLEVTTLELAHSPRAVVEIEFAKP
AQDETALAESTFDEATA

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_CORGB (A4QEZ5)

Other databases:

- EMBL:   AP009044
- RefSeq:   YP_001138713.1
- ProteinModelPortal:   A4QEZ5
- STRING:   A4QEZ5
- GeneID:   4992264
- GenomeReviews:   AP009044_GR
- KEGG:   cgt:cgR_1817
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   STTQSER
- ProtClustDB:   PRK00092
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 19484; Mature: 19353

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFPTTEILSALIEPLAASHKFDLEGLKVTKAGPKSAVAIKVDSDSRPDLDQLEVFSQEI
CCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHH
GELFDAAEQRGELNFGAGYTLEVSTPGVDNPLTLPRHWRRNRGRLVALDQDGRKRVARIG
HHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHC
ALNDAETHVVLIERNKKLLEVTTLELAHSPRAVVEIEFAKPAQDETALAESTFDEATA
CCCCCCEEEEEEECCCEEEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHCHHHCCC
>Mature Secondary Structure 
AFPTTEILSALIEPLAASHKFDLEGLKVTKAGPKSAVAIKVDSDSRPDLDQLEVFSQEI
CCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHH
GELFDAAEQRGELNFGAGYTLEVSTPGVDNPLTLPRHWRRNRGRLVALDQDGRKRVARIG
HHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHC
ALNDAETHVVLIERNKKLLEVTTLELAHSPRAVVEIEFAKPAQDETALAESTFDEATA
CCCCCCEEEEEEECCCEEEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA