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The map label for this gene is ydhP [H]

Identifier: 145294843

GI number: 145294843

Start: 873686

End: 874960

Strand: Direct

Name: ydhP [H]

Synonym: cgR_0790

Alternate gene names: 145294843

Gene position: 873686-874960 (Clockwise)

Preceding gene: 145294832

Following gene: 145294844

Centisome position: 26.36

GC content: 57.73

Gene sequence:

>1275_bases
ATGCACGAATCTGGAAAAAATCCTGTCAAGGTTGTCGACTCGCAGGCACCACAAGGACGCGGTGGGCATATCGGCGGACA
TATCAAACGCCGCCCGATTCCTAGGCAAACGGAAATTTCCGAGGTTCGTCGATATATCGTCATGACTGCCCTCGCGCTCG
GTGGCTTCGCCATCGGTGTGACGGAATTTGTCTCCATGGGTCTGCTCAGCGCGATCGCCTCCGACTTTGCGATCTCCGAA
GACCAAGCCGGACACATCATCACCATCTACGCCCTCGGCGTGGTTGTGGGTGCCCCGCTGATCACAGCGTTTACCGGCAA
ACTTCCACGACGCCGCCTGCTGCTCATCCTGGTGGCCTTCTTTGTGGTGGGTAACGCGTTGTCCACACTGAATGCGTCCT
ATGAAGTCCTGTTGATTGCCCGCTTCATCGCTGGTCTGCCACACGGCGCGTACTTCTCAGTTGCAGGTTTGGCAGCAGCA
TCGATGGCGCCAGACGGACAGCGTGGACGTGCGATCGCCTATGTCGGTATGGGTCTTTCCGTGGGTACTGTCGCCGGTGT
TCCCGCAGCCCAAGCACTGGGCGATGCCTTTGGTTGGTCCACCGCCTACGTGCTGGTCACCGTCCTGGGTGTTCTCACCT
TGCTGGCCCTATGGTTCCTCATGCCACACATGACAGAGATGAAACCCACCAGCCCGCTGACAGAACTCAGTGCTTTGAAG
AACAGCCAGGTCTGGCTCACCCTGGGCATTGGTTCCATCGGTTTCGGTGGCATGTTCGCGGTCTACACCTACATCTCTTG
GACCATGACCGACCAAGCTGGCATGCCAAGCTCCCTGATCTGGATTGTGCTGATGGCTTACGGCGTGGGCATGATCTGCG
GAAACTACGTCGGTGGACGCATCGCAGACTGGAACGTGGACCGCGGAATCCTCCTCGCACTGATCTGCATCGTGGTGGCC
CTCATCGGTTTCTACTTCACCTCCAACAACGCCATCCTGGGAACCATCAACTTCGGACTCGTCGGATTCTTCGGCTCCAC
ACTGATCCCATCACTGCAGATCCGACTCATGGACGTTGCAGGACGCGCACAAACGTTGGCTGCATCTCTGAATCAATCTG
CACTGAATATCGGTAACGCTTTGGGCGCAGCGATCGGTGGCGTGGTTATCGGCGCGGGTTATTCCTACAGCACTCCAGCC
CTTGCTGGCGCTGGCCTGGCATTCCTTGCCATCGTGGTGTGGTTCCCCATGGTGGCCTTGCGTAAACGCACATAA

Upstream 100 bases:

>100_bases
AGGAAATGTCTCACGTCACAACCTTTTGAAAGGTGGCTAAGTACGCACATTTGTTGTCTGTAATAGTGCCGGTGAGGGAG
CTGTCCGATATTGTGCTTAC

Downstream 100 bases:

>100_bases
ACGGGGTTGGCGGATGGAGGATTTCCCCAAGCACCCACTAGTGTGACAAGCATGAGTTTTCACATCACATCCGTCAATGT
CAACGGCATTAGGGCAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MHESGKNPVKVVDSQAPQGRGGHIGGHIKRRPIPRQTEISEVRRYIVMTALALGGFAIGVTEFVSMGLLSAIASDFAISE
DQAGHIITIYALGVVVGAPLITAFTGKLPRRRLLLILVAFFVVGNALSTLNASYEVLLIARFIAGLPHGAYFSVAGLAAA
SMAPDGQRGRAIAYVGMGLSVGTVAGVPAAQALGDAFGWSTAYVLVTVLGVLTLLALWFLMPHMTEMKPTSPLTELSALK
NSQVWLTLGIGSIGFGGMFAVYTYISWTMTDQAGMPSSLIWIVLMAYGVGMICGNYVGGRIADWNVDRGILLALICIVVA
LIGFYFTSNNAILGTINFGLVGFFGSTLIPSLQIRLMDVAGRAQTLAASLNQSALNIGNALGAAIGGVVIGAGYSYSTPA
LAGAGLAFLAIVVWFPMVALRKRT

Sequences:

>Translated_424_residues
MHESGKNPVKVVDSQAPQGRGGHIGGHIKRRPIPRQTEISEVRRYIVMTALALGGFAIGVTEFVSMGLLSAIASDFAISE
DQAGHIITIYALGVVVGAPLITAFTGKLPRRRLLLILVAFFVVGNALSTLNASYEVLLIARFIAGLPHGAYFSVAGLAAA
SMAPDGQRGRAIAYVGMGLSVGTVAGVPAAQALGDAFGWSTAYVLVTVLGVLTLLALWFLMPHMTEMKPTSPLTELSALK
NSQVWLTLGIGSIGFGGMFAVYTYISWTMTDQAGMPSSLIWIVLMAYGVGMICGNYVGGRIADWNVDRGILLALICIVVA
LIGFYFTSNNAILGTINFGLVGFFGSTLIPSLQIRLMDVAGRAQTLAASLNQSALNIGNALGAAIGGVVIGAGYSYSTPA
LAGAGLAFLAIVVWFPMVALRKRT
>Mature_424_residues
MHESGKNPVKVVDSQAPQGRGGHIGGHIKRRPIPRQTEISEVRRYIVMTALALGGFAIGVTEFVSMGLLSAIASDFAISE
DQAGHIITIYALGVVVGAPLITAFTGKLPRRRLLLILVAFFVVGNALSTLNASYEVLLIARFIAGLPHGAYFSVAGLAAA
SMAPDGQRGRAIAYVGMGLSVGTVAGVPAAQALGDAFGWSTAYVLVTVLGVLTLLALWFLMPHMTEMKPTSPLTELSALK
NSQVWLTLGIGSIGFGGMFAVYTYISWTMTDQAGMPSSLIWIVLMAYGVGMICGNYVGGRIADWNVDRGILLALICIVVA
LIGFYFTSNNAILGTINFGLVGFFGSTLIPSLQIRLMDVAGRAQTLAASLNQSALNIGNALGAAIGGVVIGAGYSYSTPA
LAGAGLAFLAIVVWFPMVALRKRT

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=377, Percent_Identity=38.4615384615385, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1786595, Length=369, Percent_Identity=33.0623306233062, Blast_Score=179, Evalue=3e-46,
Organism=Escherichia coli, GI1787808, Length=165, Percent_Identity=32.7272727272727, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI145693198, Length=339, Percent_Identity=24.7787610619469, Blast_Score=83, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44372; Mature: 44372

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHESGKNPVKVVDSQAPQGRGGHIGGHIKRRPIPRQTEISEVRRYIVMTALALGGFAIGV
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TEFVSMGLLSAIASDFAISEDQAGHIITIYALGVVVGAPLITAFTGKLPRRRLLLILVAF
HHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FVVGNALSTLNASYEVLLIARFIAGLPHGAYFSVAGLAAASMAPDGQRGRAIAYVGMGLS
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
VGTVAGVPAAQALGDAFGWSTAYVLVTVLGVLTLLALWFLMPHMTEMKPTSPLTELSALK
HHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHC
NSQVWLTLGIGSIGFGGMFAVYTYISWTMTDQAGMPSSLIWIVLMAYGVGMICGNYVGGR
CCCEEEEEECCCCCHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCE
IADWNVDRGILLALICIVVALIGFYFTSNNAILGTINFGLVGFFGSTLIPSLQIRLMDVA
EECCCCCHHHHHHHHHHHHHHHHHHEECCCEEEEEEHHHHHHHHHHHHHCHHHEEEEHHC
GRAQTLAASLNQSALNIGNALGAAIGGVVIGAGYSYSTPALAGAGLAFLAIVVWFPMVAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RKRT
HCCC
>Mature Secondary Structure
MHESGKNPVKVVDSQAPQGRGGHIGGHIKRRPIPRQTEISEVRRYIVMTALALGGFAIGV
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TEFVSMGLLSAIASDFAISEDQAGHIITIYALGVVVGAPLITAFTGKLPRRRLLLILVAF
HHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FVVGNALSTLNASYEVLLIARFIAGLPHGAYFSVAGLAAASMAPDGQRGRAIAYVGMGLS
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
VGTVAGVPAAQALGDAFGWSTAYVLVTVLGVLTLLALWFLMPHMTEMKPTSPLTELSALK
HHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHC
NSQVWLTLGIGSIGFGGMFAVYTYISWTMTDQAGMPSSLIWIVLMAYGVGMICGNYVGGR
CCCEEEEEECCCCCHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCE
IADWNVDRGILLALICIVVALIGFYFTSNNAILGTINFGLVGFFGSTLIPSLQIRLMDVA
EECCCCCHHHHHHHHHHHHHHHHHHEECCCEEEEEEHHHHHHHHHHHHHCHHHEEEEHHC
GRAQTLAASLNQSALNIGNALGAAIGGVVIGAGYSYSTPALAGAGLAFLAIVVWFPMVAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RKRT
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]