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The map label for this gene is 145294824

Identifier: 145294824

GI number: 145294824

Start: 851477

End: 851887

Strand: Direct

Name: 145294824

Synonym: cgR_0771

Alternate gene names: NA

Gene position: 851477-851887 (Clockwise)

Preceding gene: 145294823

Following gene: 145294825

Centisome position: 25.69

GC content: 47.45

Gene sequence:

>411_bases
GTGAAGCACACCAGAATTCGTCCTTTCAATACGAAGGACACCTATCCAGAGCAAAACCTGAGCAATGATCTTTGCCAAGC
TGTGGTCGCTAACGGAGTGGTATATCTCCGAGGGCAAATTGGGCAAGATTTGGATACGCGAGAGTCTGTCGGAATTGGTG
ATGTTGAGGTACAGGCTGAAAAGGCGATGTCCAATATTGACATGCTTCTCAAGGAAGCAGGAGGTGATCTAGAAGATATC
GTCAAAGTGACTGTCTATCTGACTGACATTCGGTATCGAGAGACGGTCTACAACGTTATGGGTCGTTGGTTAAAAGGGGT
GTTCCCAGTATCGACAGGACTGGTCGTGGAGGCTTTGGCTAGGCCAGAGTGGCTAGTTGAAATTGATGCAACTGCAGTCT
TAGGAGAATAA

Upstream 100 bases:

>100_bases
AGAGGGTTGTGCGTACAGATGCCACAAAGGAAGCTGAACCCGCAGTTTAATGCGGTAACTCAAGAACACCGCTGGTCAGA
AATAGAGAATTGGAGTTTTC

Downstream 100 bases:

>100_bases
CCTTGACTTTCTCAATAGTTGCTAGAGACAACAGTGGTGCAATTGGGATGGCAGTTTGTTCGTCTTCTCCAGCTGTTGCC
GCACGGTGTTTACATCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKHTRIRPFNTKDTYPEQNLSNDLCQAVVANGVVYLRGQIGQDLDTRESVGIGDVEVQAEKAMSNIDMLLKEAGGDLEDI
VKVTVYLTDIRYRETVYNVMGRWLKGVFPVSTGLVVEALARPEWLVEIDATAVLGE

Sequences:

>Translated_136_residues
MKHTRIRPFNTKDTYPEQNLSNDLCQAVVANGVVYLRGQIGQDLDTRESVGIGDVEVQAEKAMSNIDMLLKEAGGDLEDI
VKVTVYLTDIRYRETVYNVMGRWLKGVFPVSTGLVVEALARPEWLVEIDATAVLGE
>Mature_136_residues
MKHTRIRPFNTKDTYPEQNLSNDLCQAVVANGVVYLRGQIGQDLDTRESVGIGDVEVQAEKAMSNIDMLLKEAGGDLEDI
VKVTVYLTDIRYRETVYNVMGRWLKGVFPVSTGLVVEALARPEWLVEIDATAVLGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=110, Percent_Identity=36.3636363636364, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 15142; Mature: 15142

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHTRIRPFNTKDTYPEQNLSNDLCQAVVANGVVYLRGQIGQDLDTRESVGIGDVEVQAE
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHH
KAMSNIDMLLKEAGGDLEDIVKVTVYLTDIRYRETVYNVMGRWLKGVFPVSTGLVVEALA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
RPEWLVEIDATAVLGE
CCCEEEEECCEEECCC
>Mature Secondary Structure
MKHTRIRPFNTKDTYPEQNLSNDLCQAVVANGVVYLRGQIGQDLDTRESVGIGDVEVQAE
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHH
KAMSNIDMLLKEAGGDLEDIVKVTVYLTDIRYRETVYNVMGRWLKGVFPVSTGLVVEALA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
RPEWLVEIDATAVLGE
CCCEEEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7787182; 8590279; 8905231 [H]