Definition | Corynebacterium glutamicum R chromosome, complete genome. |
---|---|
Accession | NC_009342 |
Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is paaB [H]
Identifier: 145294700
GI number: 145294700
Start: 706709
End: 706996
Strand: Direct
Name: paaB [H]
Synonym: cgR_0648
Alternate gene names: 145294700
Gene position: 706709-706996 (Clockwise)
Preceding gene: 145294699
Following gene: 145294701
Centisome position: 21.32
GC content: 55.56
Gene sequence:
>288_bases ATGTCTGATTCAACTTGGCCTCAGTTTGAGGTATTTGTTCGCTCAAACCGCGGATTATCCCACGTCCACGCTGGCTCTTT GCACGCGCCAGATGAAACCATGGCACTGCGCAACGCACGCGATCTGTACACCCGCCGCAACGAAGGCACCTCCGTGTGGG TCGTTCCATCCCAGGCGATCACCGCATCTGATCCTGATTCCAAGGGTGGCTTCTTCGAGTCCGCAAGCGGCAAGGCTTAC CGCCATGCAACCTACTTTGAAAAGTCTGAAGGAGTGCCACACCTATGA
Upstream 100 bases:
>100_bases TGACGGCGCCTGGGTGCGCGAGGCTGCCGCGGCCTACGACCGCAAGCACAACCGCGTCGACACTGCATTAGTTGTTTAAA CCGAGAAGGAAATAGAGAAC
Downstream 100 bases:
>100_bases GTTTTGCAACTAACGATTCAGCGACGCGCCAAACTCAGGGCGACGCAATGACGCCGGAGGACGTCGTAGCATCCGGCCAA GTAGCAAGCGACGCCGTAGC
Product: phenylacetate-CoA oxygenase subunit PaaB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MSDSTWPQFEVFVRSNRGLSHVHAGSLHAPDETMALRNARDLYTRRNEGTSVWVVPSQAITASDPDSKGGFFESASGKAY RHATYFEKSEGVPHL
Sequences:
>Translated_95_residues MSDSTWPQFEVFVRSNRGLSHVHAGSLHAPDETMALRNARDLYTRRNEGTSVWVVPSQAITASDPDSKGGFFESASGKAY RHATYFEKSEGVPHL >Mature_94_residues SDSTWPQFEVFVRSNRGLSHVHAGSLHAPDETMALRNARDLYTRRNEGTSVWVVPSQAITASDPDSKGGFFESASGKAYR HATYFEKSEGVPHL
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3460
COG function: function code Q; Uncharacterized enzyme of phenylacetate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787655, Length=95, Percent_Identity=55.7894736842105, Blast_Score=119, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009359 [H]
Pfam domain/function: PF06243 PaaB [H]
EC number: NA
Molecular weight: Translated: 10540; Mature: 10408
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSTWPQFEVFVRSNRGLSHVHAGSLHAPDETMALRNARDLYTRRNEGTSVWVVPSQAI CCCCCCCEEEEEEECCCCCCEECCCCCCCCCHHHHHHCHHHHHCCCCCCCEEEEECCCCE TASDPDSKGGFFESASGKAYRHATYFEKSEGVPHL ECCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCC >Mature Secondary Structure SDSTWPQFEVFVRSNRGLSHVHAGSLHAPDETMALRNARDLYTRRNEGTSVWVVPSQAI CCCCCCEEEEEEECCCCCCEECCCCCCCCCHHHHHHCHHHHHCCCCCCCEEEEECCCCE TASDPDSKGGFFESASGKAYRHATYFEKSEGVPHL ECCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]