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The map label for this gene is tnpR [H]

Identifier: 145294608

GI number: 145294608

Start: 618743

End: 619351

Strand: Direct

Name: tnpR [H]

Synonym: cgR_0559

Alternate gene names: 145294608

Gene position: 618743-619351 (Clockwise)

Preceding gene: 145294607

Following gene: 145294609

Centisome position: 18.67

GC content: 64.53

Gene sequence:

>609_bases
ATGGGACATGAATTCGGTTACGCCCGGGTATCCACCAATGATCAAGATGCCCGACTCCAACACGACGCACTGACAAAAGC
CGGCTGCTACCGGATCTTCACCGACACCGCCTCCGGCTCCTTGGAGTCGCGTCCCGAACTCGATAAATTGCTCGATCAAC
TTCGCCCGGGTGACACGTTGGTGGTGTGGCGACTGGACCGGTTGGGTCGCTCGATCAGGCACCTCATCGATCAACTCGCC
ACACTCCAGGAGCGTGGGGTGGAGTTTCGGTCCCTGCAGGAAAACATCGACACCTCCTCCTCCGGCGGGCGCTTGGTATT
CCACATCTTCGCCTCACTCGCCGAGTTCGAGCGCGACCTTATTCGGGAGCGGACCAACGCCGGGCTCGAGGCCGCCCGGG
CCCGCGGCCGTACCGGCGGCCGGCCGCCCTCACTTAGCGGGGATAAGTTGCGCACCGCGCGGAAACTCTACGAACAAAAG
GACATGACCGTCGCCCAGATCGGCGAGGTCCTCGGTGTCAGCCGCACCACCGTCTACCGGGCGCTGCGCCGCGACACCGG
CGCCCTGCCCACGCGCAAGCAAGCCTCCCCGGGTCCTCTACCCGGCTAA

Upstream 100 bases:

>100_bases
CGTAAAGGTGGTTGTGTCACGATTTTGTAGCACAACTCAGTGTCATATTCTATGTACCGATTCATCGTGTAGTCGATGGG
TTCTGATACATTTTCTGGTT

Downstream 100 bases:

>100_bases
TCTGGGAAGAAACCGCTAATCTGGGAAGAAACCGCTAATCGACGCTGCAGGTGGCGGTCAGATCCACGGGAGAAGGAGAG
GACACGCGGGTGTTTGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MGHEFGYARVSTNDQDARLQHDALTKAGCYRIFTDTASGSLESRPELDKLLDQLRPGDTLVVWRLDRLGRSIRHLIDQLA
TLQERGVEFRSLQENIDTSSSGGRLVFHIFASLAEFERDLIRERTNAGLEAARARGRTGGRPPSLSGDKLRTARKLYEQK
DMTVAQIGEVLGVSRTTVYRALRRDTGALPTRKQASPGPLPG

Sequences:

>Translated_202_residues
MGHEFGYARVSTNDQDARLQHDALTKAGCYRIFTDTASGSLESRPELDKLLDQLRPGDTLVVWRLDRLGRSIRHLIDQLA
TLQERGVEFRSLQENIDTSSSGGRLVFHIFASLAEFERDLIRERTNAGLEAARARGRTGGRPPSLSGDKLRTARKLYEQK
DMTVAQIGEVLGVSRTTVYRALRRDTGALPTRKQASPGPLPG
>Mature_201_residues
GHEFGYARVSTNDQDARLQHDALTKAGCYRIFTDTASGSLESRPELDKLLDQLRPGDTLVVWRLDRLGRSIRHLIDQLAT
LQERGVEFRSLQENIDTSSSGGRLVFHIFASLAEFERDLIRERTNAGLEAARARGRTGGRPPSLSGDKLRTARKLYEQKD
MTVAQIGEVLGVSRTTVYRALRRDTGALPTRKQASPGPLPG

Specific function: Resolvase catalyzes the resolution (a site-specific recombination) of the cointegrated replicon to yield the final transposition products [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

Organism=Escherichia coli, GI1787404, Length=152, Percent_Identity=57.2368421052632, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1787827, Length=193, Percent_Identity=34.1968911917098, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1787638, Length=193, Percent_Identity=34.1968911917098, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 22459; Mature: 22327

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS00397 RECOMBINASES_1 ; PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHEFGYARVSTNDQDARLQHDALTKAGCYRIFTDTASGSLESRPELDKLLDQLRPGDTL
CCCCCCCEECCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHCCCCEE
VVWRLDRLGRSIRHLIDQLATLQERGVEFRSLQENIDTSSSGGRLVFHIFASLAEFERDL
EEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
IRERTNAGLEAARARGRTGGRPPSLSGDKLRTARKLYEQKDMTVAQIGEVLGVSRTTVYR
HHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHH
ALRRDTGALPTRKQASPGPLPG
HHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GHEFGYARVSTNDQDARLQHDALTKAGCYRIFTDTASGSLESRPELDKLLDQLRPGDTL
CCCCCCEECCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHCCCCEE
VVWRLDRLGRSIRHLIDQLATLQERGVEFRSLQENIDTSSSGGRLVFHIFASLAEFERDL
EEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
IRERTNAGLEAARARGRTGGRPPSLSGDKLRTARKLYEQKDMTVAQIGEVLGVSRTTVYR
HHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHH
ALRRDTGALPTRKQASPGPLPG
HHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2170815; 2555186 [H]