Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is csp1 [H]
Identifier: 145294599
GI number: 145294599
Start: 609477
End: 611009
Strand: Direct
Name: csp1 [H]
Synonym: cgR_0550
Alternate gene names: 145294599
Gene position: 609477-611009 (Clockwise)
Preceding gene: 145294598
Following gene: 145294600
Centisome position: 18.39
GC content: 53.95
Gene sequence:
>1533_bases GTGGCTACCGCGCAATCGGAACGGATTATTGCCCCGGAGGACCGTGACACCTATGTCTCAGAGTTCCAATACGATGTGAA TAATCCCCCAGTCGTTGATGGTGTCGGCGGTCTCACGGAGGCTGAAATCGCTGAGATCCAGGACAAGATCCAGCAGGCAG AGGCCTCCGGCCCACCGCAAGATGAGATCATCCCCGGTCAGATGTGGTCGGACAAGGTCGGCATCCCCGAGGGTTACGAC AAGACAGAAGCCGACCGCTCCGAGGTCGCGATCGCCACAGAGCAGTCCCAGCCGCAAGCACGGACATTCATGGCAACGGC GGAGCGGTGCAAGTCGTTCTGGTTGATCCCGTTCAAGGTGTGCGGGGAGATCCTGGATCGCTACGAGGCTCTGGGCGGAG AAACCAGTTGGCTTCTGCTGCCCATCGAACACCAGTCGATCAACCCCGACGGCCAGGGCCACCGTCAGCGGTTCGTCGGC GGCGTCATCTACCAGCACCCCGATACCGGAGCGCATGCGGTCTCACCGATGACAATGGCTCTGTGGCAGCGTCACGGCTG GGAAGCCGGCTGGCTTGGCTACCCTCTCGGCGGTGAAGTTCCGGTGGAAGGATCCACCACCATTGACGGTGAGATCAGCG GCTGGGTTCAGCAATTCCAGGGTGGGCGCGTCTACCGCACCCCAATCTTGGAAGGCTTTCAGATTGCCAGTATCAACGGA GTCATCCTCGATAAATGGCTCGAATTGGGGGGACCTTCAGGGTATTTAGGATTTCCAATAGCTGATGAGGCCGGGGTCAC AGATGGAATGGGACGTTTCAGCATCTTCCAAAGAGGAGAAATCTATTGGGCCCCCGGGCTAGGGGCTCATGCTGTTTCTG GGACGATCCTGGACGACTGGAAAAGTGCAGAGGGGCCAGCTGGAGATTTTGGCTACCCAATTGCCCCGATGGAATGGGTT GATGAGTTCACTTACATCCAGAGTTTCGAAGGTGGAGAAATCCAAGGCGAAGTCTCTCAGGGTTTTGCTCCACGCGGTCT AACCAGTCAGTACATACAGGCTGATTCCCAGGAAGAAGCAGATGCTTATTTTGATGCGATTGAAGATGAGTGGATTGCAG AGAGTCTAGGATCCCCCGGGATTTCCCTTATGCAGAAAGGTGCACCTGTTACGTATGGACCATGCATCCTAAAGCCAAAC AATATTCATATAAGGACAAAAAGTGGGGAGAGTGATTTCGGAATTGTAGGGTTTAAGCCATCGACAACTTGCACTAAACC GGTTTCATCAATCCAGCACACAACAAACTTAAGGTATAAATACTATCAGTGGTGGTTGAAGGCAGCTTCTGCAACTGCAT ATTCAGATCCGGGGCTCACCACAACGCTTGTTCAGAAAAACATAGAACACCATTGTCGTGGACATGTTGATACCTGGTTT TGGGGCACTGCAGCTGGTGTCATTAACTACGGCGGAAAAGAATATTACGCTAGGGTTTATCCGGACATCGCAAGATTTTC CTGCCGGGTATAG
Upstream 100 bases:
>100_bases AATAATATTAATGCTTTCGCAAGGAGTGCTTTAGGGGTTTCGAAGAAAACTGGTCGGTGCGCTCGCATCGACCCTAATCG CTGTGGGCTTGCTATCCCCG
Downstream 100 bases:
>100_bases GAACAAGAGTGGCAACCTCATACGAGCTGAAGCATTTTCCTCAGAGAATCTATGTCTGTTATCTGCAGGAGTCTTTGCAG CTTAGGCAAAGGGTCCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MATAQSERIIAPEDRDTYVSEFQYDVNNPPVVDGVGGLTEAEIAEIQDKIQQAEASGPPQDEIIPGQMWSDKVGIPEGYD KTEADRSEVAIATEQSQPQARTFMATAERCKSFWLIPFKVCGEILDRYEALGGETSWLLLPIEHQSINPDGQGHRQRFVG GVIYQHPDTGAHAVSPMTMALWQRHGWEAGWLGYPLGGEVPVEGSTTIDGEISGWVQQFQGGRVYRTPILEGFQIASING VILDKWLELGGPSGYLGFPIADEAGVTDGMGRFSIFQRGEIYWAPGLGAHAVSGTILDDWKSAEGPAGDFGYPIAPMEWV DEFTYIQSFEGGEIQGEVSQGFAPRGLTSQYIQADSQEEADAYFDAIEDEWIAESLGSPGISLMQKGAPVTYGPCILKPN NIHIRTKSGESDFGIVGFKPSTTCTKPVSSIQHTTNLRYKYYQWWLKAASATAYSDPGLTTTLVQKNIEHHCRGHVDTWF WGTAAGVINYGGKEYYARVYPDIARFSCRV
Sequences:
>Translated_510_residues MATAQSERIIAPEDRDTYVSEFQYDVNNPPVVDGVGGLTEAEIAEIQDKIQQAEASGPPQDEIIPGQMWSDKVGIPEGYD KTEADRSEVAIATEQSQPQARTFMATAERCKSFWLIPFKVCGEILDRYEALGGETSWLLLPIEHQSINPDGQGHRQRFVG GVIYQHPDTGAHAVSPMTMALWQRHGWEAGWLGYPLGGEVPVEGSTTIDGEISGWVQQFQGGRVYRTPILEGFQIASING VILDKWLELGGPSGYLGFPIADEAGVTDGMGRFSIFQRGEIYWAPGLGAHAVSGTILDDWKSAEGPAGDFGYPIAPMEWV DEFTYIQSFEGGEIQGEVSQGFAPRGLTSQYIQADSQEEADAYFDAIEDEWIAESLGSPGISLMQKGAPVTYGPCILKPN NIHIRTKSGESDFGIVGFKPSTTCTKPVSSIQHTTNLRYKYYQWWLKAASATAYSDPGLTTTLVQKNIEHHCRGHVDTWF WGTAAGVINYGGKEYYARVYPDIARFSCRV >Mature_509_residues ATAQSERIIAPEDRDTYVSEFQYDVNNPPVVDGVGGLTEAEIAEIQDKIQQAEASGPPQDEIIPGQMWSDKVGIPEGYDK TEADRSEVAIATEQSQPQARTFMATAERCKSFWLIPFKVCGEILDRYEALGGETSWLLLPIEHQSINPDGQGHRQRFVGG VIYQHPDTGAHAVSPMTMALWQRHGWEAGWLGYPLGGEVPVEGSTTIDGEISGWVQQFQGGRVYRTPILEGFQIASINGV ILDKWLELGGPSGYLGFPIADEAGVTDGMGRFSIFQRGEIYWAPGLGAHAVSGTILDDWKSAEGPAGDFGYPIAPMEWVD EFTYIQSFEGGEIQGEVSQGFAPRGLTSQYIQADSQEEADAYFDAIEDEWIAESLGSPGISLMQKGAPVTYGPCILKPNN IHIRTKSGESDFGIVGFKPSTTCTKPVSSIQHTTNLRYKYYQWWLKAASATAYSDPGLTTTLVQKNIEHHCRGHVDTWFW GTAAGVINYGGKEYYARVYPDIARFSCRV
Specific function: One of the two major secreted proteins [H]
COG id: COG5479
COG function: function code M; Uncharacterized protein potentially involved in peptidoglycan biosynthesis
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR013207 [H]
Pfam domain/function: PF00756 Esterase; PF08310 LGFP [H]
EC number: NA
Molecular weight: Translated: 56064; Mature: 55933
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAQSERIIAPEDRDTYVSEFQYDVNNPPVVDGVGGLTEAEIAEIQDKIQQAEASGPPQ CCCCCCCCEECCCCCCCCHHHEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCC DEIIPGQMWSDKVGIPEGYDKTEADRSEVAIATEQSQPQARTFMATAERCKSFWLIPFKV CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEEEEHHHH CGEILDRYEALGGETSWLLLPIEHQSINPDGQGHRQRFVGGVIYQHPDTGAHAVSPMTMA HHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCEEEECCCCCCHHHCHHHHH LWQRHGWEAGWLGYPLGGEVPVEGSTTIDGEISGWVQQFQGGRVYRTPILEGFQIASING HHHHCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHCCCEEEECCCCCCEEEEECCC VILDKWLELGGPSGYLGFPIADEAGVTDGMGRFSIFQRGEIYWAPGLGAHAVSGTILDDW HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCCCHHHCCCCHHCC KSAEGPAGDFGYPIAPMEWVDEFTYIQSFEGGEIQGEVSQGFAPRGLTSQYIQADSQEEA CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECHHHCCCCCCCCCHHHHCCCCCHHH DAYFDAIEDEWIAESLGSPGISLMQKGAPVTYGPCILKPNNIHIRTKSGESDFGIVGFKP HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEECCEEECCCCEEEEECCCCCCCEEEECCC STTCTKPVSSIQHTTNLRYKYYQWWLKAASATAYSDPGLTTTLVQKNIEHHCRGHVDTWF CCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEE WGTAAGVINYGGKEYYARVYPDIARFSCRV HHHHHHHHHCCCHHHHHHHCCCHHHHCCCC >Mature Secondary Structure ATAQSERIIAPEDRDTYVSEFQYDVNNPPVVDGVGGLTEAEIAEIQDKIQQAEASGPPQ CCCCCCCEECCCCCCCCHHHEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCC DEIIPGQMWSDKVGIPEGYDKTEADRSEVAIATEQSQPQARTFMATAERCKSFWLIPFKV CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEEEEHHHH CGEILDRYEALGGETSWLLLPIEHQSINPDGQGHRQRFVGGVIYQHPDTGAHAVSPMTMA HHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCEEEECCCCCCHHHCHHHHH LWQRHGWEAGWLGYPLGGEVPVEGSTTIDGEISGWVQQFQGGRVYRTPILEGFQIASING HHHHCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHCCCEEEECCCCCCEEEEECCC VILDKWLELGGPSGYLGFPIADEAGVTDGMGRFSIFQRGEIYWAPGLGAHAVSGTILDDW HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCCCHHHCCCCHHCC KSAEGPAGDFGYPIAPMEWVDEFTYIQSFEGGEIQGEVSQGFAPRGLTSQYIQADSQEEA CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECHHHCCCCCCCCCHHHHCCCCCHHH DAYFDAIEDEWIAESLGSPGISLMQKGAPVTYGPCILKPNNIHIRTKSGESDFGIVGFKP HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEECCEEECCCCEEEEECCCCCCCEEEECCC STTCTKPVSSIQHTTNLRYKYYQWWLKAASATAYSDPGLTTTLVQKNIEHHCRGHVDTWF CCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEE WGTAAGVINYGGKEYYARVYPDIARFSCRV HHHHHHHHHCCCHHHHHHHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12948626 [H]