Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145294592
Identifier: 145294592
GI number: 145294592
Start: 602421
End: 603302
Strand: Direct
Name: 145294592
Synonym: cgR_0543
Alternate gene names: NA
Gene position: 602421-603302 (Clockwise)
Preceding gene: 145294591
Following gene: 145294593
Centisome position: 18.18
GC content: 67.12
Gene sequence:
>882_bases ATGAAGAAGTTCGCAGCTAGCGTGGCCGCCGGGGTGGTCGCAGCAGGAGCACTCGCCATCGCACCAGCCGGTGCCATGGA GAGCAAGACCTTCGCCGGGGACACCGAGGAGGCAAAGCCGGTCGTCTCCGTCCGCGTCGATGATTCTGACCCTGAAGAGG GCGTGTGCACCGGTACCGCCATCGACCGCCACTGGGTGATCACCGCCCGTCACTGCATCGACGCGGCCGCCAAGCCGGGC GGTTCGGTGCGCATCGGGCAGGGTGACGAACAGCGGGTGTACAAGGTGGATCGTCACGAGGTTGCCCCACGCGGGGACAT CGCCCTGCTCCACACTGAGCAGGAGATCAACCTGGAGACCTTCGCTGAGATCGCGGATGAGGTTCCCACCGGGGACGTCA ACATTTACGGCTGGTCTTCCGATGGCTCCGGTGGTTCCACTAAGCTACCGTCCGCCAAGGCGAAGGTTCGCGGTGACTCG CCGCTCGCGCTCTACGAGGCCCCGAAGGCCCTCGACGTTGCCCTGAAGGACGGCGATCGCATCCAGCCGGGCGACTCTGG TGGTGCGATCTTTGCGGACGGCAAGGTCGCCGGCATCATGTCCGCTGGTCTCTTCGAGGACCCGGAGAACCCGACGGAGG AGGAGATGACCTCCAATGCCGCTGTGTCTGTGGCACCGGTGGCGGAGCAGGCCGACTGGATCCGCGGGACCATTGGCGGT GATGCGAAGGACGGCGACAAGAAGGAAGACACCAGCGAGCCTGCAGCCGCGGCGTCCTCGGAGGACTCCGGGAACACGGC CCGCAACGTCGGCATCGGCGCGGGCGTCGTCGTTCTCGCCGCGGCGGGCGCCTGGTTGCTGCTGCGCCGCCGCGGGGCCT AA
Upstream 100 bases:
>100_bases GGCGCCATACTCATCTCTTATGCGTGGCTCGCGGTGTGTGACCGTGGGCCGCTGGAAACTCTGCTTCGCCGCATCACTGC GGTGTTTGGAAAGGATAAAA
Downstream 100 bases:
>100_bases TACCCGACCCTGGTGCTGCCATTCCACCCGGACGGGCCTACATGATCGCGCCTTCAATTGGGGTGTAGCCGTTTCACCAC GGAATACGGTTGGCTCAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MKKFAASVAAGVVAAGALAIAPAGAMESKTFAGDTEEAKPVVSVRVDDSDPEEGVCTGTAIDRHWVITARHCIDAAAKPG GSVRIGQGDEQRVYKVDRHEVAPRGDIALLHTEQEINLETFAEIADEVPTGDVNIYGWSSDGSGGSTKLPSAKAKVRGDS PLALYEAPKALDVALKDGDRIQPGDSGGAIFADGKVAGIMSAGLFEDPENPTEEEMTSNAAVSVAPVAEQADWIRGTIGG DAKDGDKKEDTSEPAAAASSEDSGNTARNVGIGAGVVVLAAAGAWLLLRRRGA
Sequences:
>Translated_293_residues MKKFAASVAAGVVAAGALAIAPAGAMESKTFAGDTEEAKPVVSVRVDDSDPEEGVCTGTAIDRHWVITARHCIDAAAKPG GSVRIGQGDEQRVYKVDRHEVAPRGDIALLHTEQEINLETFAEIADEVPTGDVNIYGWSSDGSGGSTKLPSAKAKVRGDS PLALYEAPKALDVALKDGDRIQPGDSGGAIFADGKVAGIMSAGLFEDPENPTEEEMTSNAAVSVAPVAEQADWIRGTIGG DAKDGDKKEDTSEPAAAASSEDSGNTARNVGIGAGVVVLAAAGAWLLLRRRGA >Mature_293_residues MKKFAASVAAGVVAAGALAIAPAGAMESKTFAGDTEEAKPVVSVRVDDSDPEEGVCTGTAIDRHWVITARHCIDAAAKPG GSVRIGQGDEQRVYKVDRHEVAPRGDIALLHTEQEINLETFAEIADEVPTGDVNIYGWSSDGSGGSTKLPSAKAKVRGDS PLALYEAPKALDVALKDGDRIQPGDSGGAIFADGKVAGIMSAGLFEDPENPTEEEMTSNAAVSVAPVAEQADWIRGTIGG DAKDGDKKEDTSEPAAAASSEDSGNTARNVGIGAGVVVLAAAGAWLLLRRRGA
Specific function: Unknown
COG id: COG0265
COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 peptidase S1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009003 - InterPro: IPR001254 - InterPro: IPR001314 [H]
Pfam domain/function: PF00089 Trypsin [H]
EC number: NA
Molecular weight: Translated: 30032; Mature: 30032
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: PS50240 TRYPSIN_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFAASVAAGVVAAGALAIAPAGAMESKTFAGDTEEAKPVVSVRVDDSDPEEGVCTGTA CCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCE IDRHWVITARHCIDAAAKPGGSVRIGQGDEQRVYKVDRHEVAPRGDIALLHTEQEINLET ECCEEEEEHHHHHHHHCCCCCEEEECCCCCCCEEEEHHHCCCCCCCEEEEECCCCCCHHH FAEIADEVPTGDVNIYGWSSDGSGGSTKLPSAKAKVRGDSPLALYEAPKALDVALKDGDR HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCEEEEECCCEEEEEECCCCE IQPGDSGGAIFADGKVAGIMSAGLFEDPENPTEEEMTSNAAVSVAPVAEQADWIRGTIGG ECCCCCCCEEEECCCEEEEEECCCCCCCCCCCHHHHHCCCEEEEECCHHHCHHHEEECCC DAKDGDKKEDTSEPAAAASSEDSGNTARNVGIGAGVVVLAAAGAWLLLRRRGA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHCCCEEEEEECCC >Mature Secondary Structure MKKFAASVAAGVVAAGALAIAPAGAMESKTFAGDTEEAKPVVSVRVDDSDPEEGVCTGTA CCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCE IDRHWVITARHCIDAAAKPGGSVRIGQGDEQRVYKVDRHEVAPRGDIALLHTEQEINLET ECCEEEEEHHHHHHHHCCCCCEEEECCCCCCCEEEEHHHCCCCCCCEEEEECCCCCCHHH FAEIADEVPTGDVNIYGWSSDGSGGSTKLPSAKAKVRGDSPLALYEAPKALDVALKDGDR HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCEEEEECCCEEEEEECCCCE IQPGDSGGAIFADGKVAGIMSAGLFEDPENPTEEEMTSNAAVSVAPVAEQADWIRGTIGG ECCCCCCCEEEECCCEEEEEECCCCCCCCCCCHHHHHCCCEEEEECCHHHCHHHEEECCC DAKDGDKKEDTSEPAAAASSEDSGNTARNVGIGAGVVVLAAAGAWLLLRRRGA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12948626 [H]