Definition Corynebacterium glutamicum R chromosome, complete genome.
Accession NC_009342
Length 3,314,179

Click here to switch to the map view.

The map label for this gene is 145294592

Identifier: 145294592

GI number: 145294592

Start: 602421

End: 603302

Strand: Direct

Name: 145294592

Synonym: cgR_0543

Alternate gene names: NA

Gene position: 602421-603302 (Clockwise)

Preceding gene: 145294591

Following gene: 145294593

Centisome position: 18.18

GC content: 67.12

Gene sequence:

>882_bases
ATGAAGAAGTTCGCAGCTAGCGTGGCCGCCGGGGTGGTCGCAGCAGGAGCACTCGCCATCGCACCAGCCGGTGCCATGGA
GAGCAAGACCTTCGCCGGGGACACCGAGGAGGCAAAGCCGGTCGTCTCCGTCCGCGTCGATGATTCTGACCCTGAAGAGG
GCGTGTGCACCGGTACCGCCATCGACCGCCACTGGGTGATCACCGCCCGTCACTGCATCGACGCGGCCGCCAAGCCGGGC
GGTTCGGTGCGCATCGGGCAGGGTGACGAACAGCGGGTGTACAAGGTGGATCGTCACGAGGTTGCCCCACGCGGGGACAT
CGCCCTGCTCCACACTGAGCAGGAGATCAACCTGGAGACCTTCGCTGAGATCGCGGATGAGGTTCCCACCGGGGACGTCA
ACATTTACGGCTGGTCTTCCGATGGCTCCGGTGGTTCCACTAAGCTACCGTCCGCCAAGGCGAAGGTTCGCGGTGACTCG
CCGCTCGCGCTCTACGAGGCCCCGAAGGCCCTCGACGTTGCCCTGAAGGACGGCGATCGCATCCAGCCGGGCGACTCTGG
TGGTGCGATCTTTGCGGACGGCAAGGTCGCCGGCATCATGTCCGCTGGTCTCTTCGAGGACCCGGAGAACCCGACGGAGG
AGGAGATGACCTCCAATGCCGCTGTGTCTGTGGCACCGGTGGCGGAGCAGGCCGACTGGATCCGCGGGACCATTGGCGGT
GATGCGAAGGACGGCGACAAGAAGGAAGACACCAGCGAGCCTGCAGCCGCGGCGTCCTCGGAGGACTCCGGGAACACGGC
CCGCAACGTCGGCATCGGCGCGGGCGTCGTCGTTCTCGCCGCGGCGGGCGCCTGGTTGCTGCTGCGCCGCCGCGGGGCCT
AA

Upstream 100 bases:

>100_bases
GGCGCCATACTCATCTCTTATGCGTGGCTCGCGGTGTGTGACCGTGGGCCGCTGGAAACTCTGCTTCGCCGCATCACTGC
GGTGTTTGGAAAGGATAAAA

Downstream 100 bases:

>100_bases
TACCCGACCCTGGTGCTGCCATTCCACCCGGACGGGCCTACATGATCGCGCCTTCAATTGGGGTGTAGCCGTTTCACCAC
GGAATACGGTTGGCTCAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MKKFAASVAAGVVAAGALAIAPAGAMESKTFAGDTEEAKPVVSVRVDDSDPEEGVCTGTAIDRHWVITARHCIDAAAKPG
GSVRIGQGDEQRVYKVDRHEVAPRGDIALLHTEQEINLETFAEIADEVPTGDVNIYGWSSDGSGGSTKLPSAKAKVRGDS
PLALYEAPKALDVALKDGDRIQPGDSGGAIFADGKVAGIMSAGLFEDPENPTEEEMTSNAAVSVAPVAEQADWIRGTIGG
DAKDGDKKEDTSEPAAAASSEDSGNTARNVGIGAGVVVLAAAGAWLLLRRRGA

Sequences:

>Translated_293_residues
MKKFAASVAAGVVAAGALAIAPAGAMESKTFAGDTEEAKPVVSVRVDDSDPEEGVCTGTAIDRHWVITARHCIDAAAKPG
GSVRIGQGDEQRVYKVDRHEVAPRGDIALLHTEQEINLETFAEIADEVPTGDVNIYGWSSDGSGGSTKLPSAKAKVRGDS
PLALYEAPKALDVALKDGDRIQPGDSGGAIFADGKVAGIMSAGLFEDPENPTEEEMTSNAAVSVAPVAEQADWIRGTIGG
DAKDGDKKEDTSEPAAAASSEDSGNTARNVGIGAGVVVLAAAGAWLLLRRRGA
>Mature_293_residues
MKKFAASVAAGVVAAGALAIAPAGAMESKTFAGDTEEAKPVVSVRVDDSDPEEGVCTGTAIDRHWVITARHCIDAAAKPG
GSVRIGQGDEQRVYKVDRHEVAPRGDIALLHTEQEINLETFAEIADEVPTGDVNIYGWSSDGSGGSTKLPSAKAKVRGDS
PLALYEAPKALDVALKDGDRIQPGDSGGAIFADGKVAGIMSAGLFEDPENPTEEEMTSNAAVSVAPVAEQADWIRGTIGG
DAKDGDKKEDTSEPAAAASSEDSGNTARNVGIGAGVVVLAAAGAWLLLRRRGA

Specific function: Unknown

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 peptidase S1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009003
- InterPro:   IPR001254
- InterPro:   IPR001314 [H]

Pfam domain/function: PF00089 Trypsin [H]

EC number: NA

Molecular weight: Translated: 30032; Mature: 30032

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: PS50240 TRYPSIN_DOM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFAASVAAGVVAAGALAIAPAGAMESKTFAGDTEEAKPVVSVRVDDSDPEEGVCTGTA
CCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCE
IDRHWVITARHCIDAAAKPGGSVRIGQGDEQRVYKVDRHEVAPRGDIALLHTEQEINLET
ECCEEEEEHHHHHHHHCCCCCEEEECCCCCCCEEEEHHHCCCCCCCEEEEECCCCCCHHH
FAEIADEVPTGDVNIYGWSSDGSGGSTKLPSAKAKVRGDSPLALYEAPKALDVALKDGDR
HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCEEEEECCCEEEEEECCCCE
IQPGDSGGAIFADGKVAGIMSAGLFEDPENPTEEEMTSNAAVSVAPVAEQADWIRGTIGG
ECCCCCCCEEEECCCEEEEEECCCCCCCCCCCHHHHHCCCEEEEECCHHHCHHHEEECCC
DAKDGDKKEDTSEPAAAASSEDSGNTARNVGIGAGVVVLAAAGAWLLLRRRGA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHCCCEEEEEECCC
>Mature Secondary Structure
MKKFAASVAAGVVAAGALAIAPAGAMESKTFAGDTEEAKPVVSVRVDDSDPEEGVCTGTA
CCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCE
IDRHWVITARHCIDAAAKPGGSVRIGQGDEQRVYKVDRHEVAPRGDIALLHTEQEINLET
ECCEEEEEHHHHHHHHCCCCCEEEECCCCCCCEEEEHHHCCCCCCCEEEEECCCCCCHHH
FAEIADEVPTGDVNIYGWSSDGSGGSTKLPSAKAKVRGDSPLALYEAPKALDVALKDGDR
HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCEEEEECCCEEEEEECCCCE
IQPGDSGGAIFADGKVAGIMSAGLFEDPENPTEEEMTSNAAVSVAPVAEQADWIRGTIGG
ECCCCCCCEEEECCCEEEEEECCCCCCCCCCCHHHHHCCCEEEEECCHHHCHHHEEECCC
DAKDGDKKEDTSEPAAAASSEDSGNTARNVGIGAGVVVLAAAGAWLLLRRRGA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]