Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145294580
Identifier: 145294580
GI number: 145294580
Start: 589741
End: 590274
Strand: Direct
Name: 145294580
Synonym: cgR_0531
Alternate gene names: NA
Gene position: 589741-590274 (Clockwise)
Preceding gene: 145294571
Following gene: 145294583
Centisome position: 17.79
GC content: 53.75
Gene sequence:
>534_bases TTGAGCGACAAGCTCTATGAGCGTCTCGCGAATCCAGGTTTTGTATTCGGCCGATTACCGCGCGGGCTGGGTGATCGGGA GTTCCACCGTAGCGTTGGTAAACGGGCATCCTCTGAAACCTGGCTATGGGTATCCTTTGATGAACCGATCAAACAGCGCG AGAACGCCACTGTCGGTGTCGGGAGGCCGGTTGTCCAGGTATGCGGTGATGCCGCGTTTTCTGGTGTCACTACGGCGTTG AAGAACTGTGGAGGACAGGCCGGCTTTGGTGCCGAACTGGGCGTACAGCGTCGATTTGGACACTCCGGATTCAGCCACGA CCCGGCCGACTCCGATCGCGCTGATCCCTTCTGCATAGAGCAGTCGAGTGGCTTCGGTGAGGAATTTCTCCCCGCTTGTC GAGTACATGCCAACAACTTAACTTACAGGTCTGTAAAGCGTTTAGCGTTTGAAGGAAATCTATATGGAAAAGCTTCGGGA AGAATAAAAACAATGGCAAAAACCAGGCCCCTTTGGAAGAGACCTGGTTTATAG
Upstream 100 bases:
>100_bases CGATTCCAGTGATCTCGCCGGTGGTGATGGCACGGACGTTGGCGCAGTGGATAAGCAATGAAAAGAATGGTCCGCACCCT GATGGGTTCCCCAGACTATC
Downstream 100 bases:
>100_bases AAAGCTGTTATGCGTACTTAGTGGGTTTAGCCTTCAGTGCCGAAAACATCGAAACCGGAGTACTGGTAGATTGTCGCCTT GGTAACCCAGAGGATGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSDKLYERLANPGFVFGRLPRGLGDREFHRSVGKRASSETWLWVSFDEPIKQRENATVGVGRPVVQVCGDAAFSGVTTAL KNCGGQAGFGAELGVQRRFGHSGFSHDPADSDRADPFCIEQSSGFGEEFLPACRVHANNLTYRSVKRLAFEGNLYGKASG RIKTMAKTRPLWKRPGL
Sequences:
>Translated_177_residues MSDKLYERLANPGFVFGRLPRGLGDREFHRSVGKRASSETWLWVSFDEPIKQRENATVGVGRPVVQVCGDAAFSGVTTAL KNCGGQAGFGAELGVQRRFGHSGFSHDPADSDRADPFCIEQSSGFGEEFLPACRVHANNLTYRSVKRLAFEGNLYGKASG RIKTMAKTRPLWKRPGL >Mature_176_residues SDKLYERLANPGFVFGRLPRGLGDREFHRSVGKRASSETWLWVSFDEPIKQRENATVGVGRPVVQVCGDAAFSGVTTALK NCGGQAGFGAELGVQRRFGHSGFSHDPADSDRADPFCIEQSSGFGEEFLPACRVHANNLTYRSVKRLAFEGNLYGKASGR IKTMAKTRPLWKRPGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19437; Mature: 19306
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: PS00399 SUCCINYL_COA_LIG_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKLYERLANPGFVFGRLPRGLGDREFHRSVGKRASSETWLWVSFDEPIKQRENATVGV CCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCCCCCC GRPVVQVCGDAAFSGVTTALKNCGGQAGFGAELGVQRRFGHSGFSHDPADSDRADPFCIE CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCHHHHCCCCCCCCCCCCCCCCCCEEEE QSSGFGEEFLPACRVHANNLTYRSVKRLAFEGNLYGKASGRIKTMAKTRPLWKRPGL CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEECCCCCEEHHHHCCCCCCCCCC >Mature Secondary Structure SDKLYERLANPGFVFGRLPRGLGDREFHRSVGKRASSETWLWVSFDEPIKQRENATVGV CHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCCCCCC GRPVVQVCGDAAFSGVTTALKNCGGQAGFGAELGVQRRFGHSGFSHDPADSDRADPFCIE CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCHHHHCCCCCCCCCCCCCCCCCCEEEE QSSGFGEEFLPACRVHANNLTYRSVKRLAFEGNLYGKASGRIKTMAKTRPLWKRPGL CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEECCCCCEEHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA