Definition | Corynebacterium glutamicum R chromosome, complete genome. |
---|---|
Accession | NC_009342 |
Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is 145294565
Identifier: 145294565
GI number: 145294565
Start: 577493
End: 579139
Strand: Direct
Name: 145294565
Synonym: cgR_0516
Alternate gene names: NA
Gene position: 577493-579139 (Clockwise)
Preceding gene: 145294564
Following gene: 145294566
Centisome position: 17.42
GC content: 55.37
Gene sequence:
>1647_bases ATGCATTTGACCTCCAACCCAGCACGCTTGAAAGAACTCTTCAACCTCGACGCGCAGAAAAGCCTCCTCTTCTCTGCGAT CCGACTAGATTCCCACCCTTTGGTCGCACCGATTATCGCCACGGTCAAAGACCAGGATCCAATTCTGCTTGTCCGTCAGC AGGAGCAGGGCAACATCTTCTCCAGCGGCGTACCCCGCAACAAAATTCGCTTCTACGCACCATGGGTGACCATCGACGAC GCGCCGCTTGAGGGCGTTGAGGCAGCCAGTTCCTTGCAGGAACTAATAAAGGAGCTTGCCGACGAAACCCCCGTCTGTTT CGCACCCGATATCGCATATGCACACTATTTGGTGGCGCAAGATCAGGTTCAGATCGCTGTGGAGTCACTTTCCCCAGAGG CGATCGATGTGGTGGAACTGGAGAAGGGGCTCGTCGAGAAGCGTTTTGCGGACTGGCGTCGCGCCGGCGTTGAAGAAGCC AAGAAGCTTGTTTCAGGCATCGCCCATTTGGAGGGCTTGGACCAAGAATTGGACCGTGTGGGCGCGGATACCCGATTTGA GTTGCTGCAAGAGATTGCCTCACAGCATGCGCTATCAGCGATTTATGTTGCATCGCCGCCAAACTTTTCTGAAATTACAG GAATTGCAGCAACTGAGGGTGCGTCAGTGCTGTGGAGTGCGGATACCCAATCGGTATTCCTGTTCCTGCCACAGGGCGCG CCTGCACCTGAAGGATCAGAAGCTGTCGGATCATTTGGTTCCGTTTCAGAGGCCGTGGCGCTGCTGATCGGCGAGGACAA AGCTGTGGGCGTGGAAGAGGAGTTTATCGGCACGGCGCTGGCATTGAGCCTGACGGAAGGGGAGATCATTCCCATCCAAA CAGAGCTCGGCCACTGGCGTGACGTGCGGGATTCCGAAGATCTGCCATTCCAAGTAATCGCATCGCGCACCAGCGTGACC ATTATGGAAAACACCCTGGAATGGACCAACAACCGTCTTGAGCGTGGCGAAGAGTTCACTGAGCTCGACATTTATGCTCA CTACTTGGAAGAGTTGGAAGATTACGCCCTCCAATTCACCTTCGATGTCGAGCCCTACTTCACCAACCTGCACTCCTCCA ACAGAATGCTCTTCCCTGGACCTCCTGTGGATTTCCCGATCAACGCAGAAACCCGATGCATTCAGCTCGACGCCGGTATT GCAGTAAAGAAGGACGGCGTGGTGCTGGGTACCTCAGATATGGCGAGGTCCCTGCCTCGAACCGCCGCTGGCCAAGAAGC CTATGAGTACTTCTTCAAGGTGGTTCGTGAAGGCATCATCGGGCAGCTGCGCCCGGGCGTGATCTGCGCTGACGTGCACG AAGCAACCCTTGATTACCTAAGCCCGCAGCTACCTCGCATGATTGACATCGGAATGCTGGGTGCCGACACCGATTTCAAC ACCATCTACCGCAAGCGCAATGTTGGTCACCTCATGGGCAAGCAGGAATCCTTTGCCAATGAGCTTCGCCCTGGATACAA GCACATTCTTCACCACGGCTCCTATGGTGCCGCGGAGATCCCTTGGCGCTACAACGGTGTAGCCATTGGTACCGAGGATT TGTGGTACATCGGCGCAGACAAGACCTACATTTTGAGCCAGCGCTAA
Upstream 100 bases:
>100_bases TCTGAGGTGTTCTCCGATTATGTCGCGGAGATTGAATCCTTCATCGGCGTCACTACAGGCATCAGCTAACCCCCTAAAAC TCACTGAAAGGCACATCACC
Downstream 100 bases:
>100_bases GGAGAACCCAGTGACAGAAATTGCAGAAAACCTTCAGCGCTTGGGTATTGAATTACCTGATCTACCAGCACCGCAGTATT CCTACGTACCGTTCAACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 548; Mature: 548
Protein sequence:
>548_residues MHLTSNPARLKELFNLDAQKSLLFSAIRLDSHPLVAPIIATVKDQDPILLVRQQEQGNIFSSGVPRNKIRFYAPWVTIDD APLEGVEAASSLQELIKELADETPVCFAPDIAYAHYLVAQDQVQIAVESLSPEAIDVVELEKGLVEKRFADWRRAGVEEA KKLVSGIAHLEGLDQELDRVGADTRFELLQEIASQHALSAIYVASPPNFSEITGIAATEGASVLWSADTQSVFLFLPQGA PAPEGSEAVGSFGSVSEAVALLIGEDKAVGVEEEFIGTALALSLTEGEIIPIQTELGHWRDVRDSEDLPFQVIASRTSVT IMENTLEWTNNRLERGEEFTELDIYAHYLEELEDYALQFTFDVEPYFTNLHSSNRMLFPGPPVDFPINAETRCIQLDAGI AVKKDGVVLGTSDMARSLPRTAAGQEAYEYFFKVVREGIIGQLRPGVICADVHEATLDYLSPQLPRMIDIGMLGADTDFN TIYRKRNVGHLMGKQESFANELRPGYKHILHHGSYGAAEIPWRYNGVAIGTEDLWYIGADKTYILSQR
Sequences:
>Translated_548_residues MHLTSNPARLKELFNLDAQKSLLFSAIRLDSHPLVAPIIATVKDQDPILLVRQQEQGNIFSSGVPRNKIRFYAPWVTIDD APLEGVEAASSLQELIKELADETPVCFAPDIAYAHYLVAQDQVQIAVESLSPEAIDVVELEKGLVEKRFADWRRAGVEEA KKLVSGIAHLEGLDQELDRVGADTRFELLQEIASQHALSAIYVASPPNFSEITGIAATEGASVLWSADTQSVFLFLPQGA PAPEGSEAVGSFGSVSEAVALLIGEDKAVGVEEEFIGTALALSLTEGEIIPIQTELGHWRDVRDSEDLPFQVIASRTSVT IMENTLEWTNNRLERGEEFTELDIYAHYLEELEDYALQFTFDVEPYFTNLHSSNRMLFPGPPVDFPINAETRCIQLDAGI AVKKDGVVLGTSDMARSLPRTAAGQEAYEYFFKVVREGIIGQLRPGVICADVHEATLDYLSPQLPRMIDIGMLGADTDFN TIYRKRNVGHLMGKQESFANELRPGYKHILHHGSYGAAEIPWRYNGVAIGTEDLWYIGADKTYILSQR >Mature_548_residues MHLTSNPARLKELFNLDAQKSLLFSAIRLDSHPLVAPIIATVKDQDPILLVRQQEQGNIFSSGVPRNKIRFYAPWVTIDD APLEGVEAASSLQELIKELADETPVCFAPDIAYAHYLVAQDQVQIAVESLSPEAIDVVELEKGLVEKRFADWRRAGVEEA KKLVSGIAHLEGLDQELDRVGADTRFELLQEIASQHALSAIYVASPPNFSEITGIAATEGASVLWSADTQSVFLFLPQGA PAPEGSEAVGSFGSVSEAVALLIGEDKAVGVEEEFIGTALALSLTEGEIIPIQTELGHWRDVRDSEDLPFQVIASRTSVT IMENTLEWTNNRLERGEEFTELDIYAHYLEELEDYALQFTFDVEPYFTNLHSSNRMLFPGPPVDFPINAETRCIQLDAGI AVKKDGVVLGTSDMARSLPRTAAGQEAYEYFFKVVREGIIGQLRPGVICADVHEATLDYLSPQLPRMIDIGMLGADTDFN TIYRKRNVGHLMGKQESFANELRPGYKHILHHGSYGAAEIPWRYNGVAIGTEDLWYIGADKTYILSQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60590; Mature: 60590
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLTSNPARLKELFNLDAQKSLLFSAIRLDSHPLVAPIIATVKDQDPILLVRQQEQGNIF CCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEECCCCCEE SSGVPRNKIRFYAPWVTIDDAPLEGVEAASSLQELIKELADETPVCFAPDIAYAHYLVAQ CCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHCC DQVQIAVESLSPEAIDVVELEKGLVEKRFADWRRAGVEEAKKLVSGIAHLEGLDQELDRV CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC GADTRFELLQEIASQHALSAIYVASPPNFSEITGIAATEGASVLWSADTQSVFLFLPQGA CCCHHHHHHHHHHHHHCEEEEEEECCCCHHHHCCEEECCCCEEEEECCCCEEEEEECCCC PAPEGSEAVGSFGSVSEAVALLIGEDKAVGVEEEFIGTALALSLTEGEIIPIQTELGHWR CCCCCHHHHCCCCCHHHHHEEEECCCCCCCCHHHHHCEEEEEEECCCCEEEEECCCCCCC DVRDSEDLPFQVIASRTSVTIMENTLEWTNNRLERGEEFTELDIYAHYLEELEDYALQFT CCCCCCCCCCEEEECCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCEEEEE FDVEPYFTNLHSSNRMLFPGPPVDFPINAETRCIQLDAGIAVKKDGVVLGTSDMARSLPR EECCHHHHCCCCCCEEECCCCCCCCCCCCCCEEEEECCCEEEECCCEEEECHHHHHHCCC TAAGQEAYEYFFKVVREGIIGQLRPGVICADVHEATLDYLSPQLPRMIDIGMLGADTDFN CCCCHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCEEEEEEECCCCCHH TIYRKRNVGHLMGKQESFANELRPGYKHILHHGSYGAAEIPWRYNGVAIGTEDLWYIGAD HHHHHCCCHHHCCCHHHHHHHHCHHHHHHHHCCCCCCEECCEEECCEEECCCCEEEECCC KTYILSQR CEEEECCC >Mature Secondary Structure MHLTSNPARLKELFNLDAQKSLLFSAIRLDSHPLVAPIIATVKDQDPILLVRQQEQGNIF CCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEECCCCCEE SSGVPRNKIRFYAPWVTIDDAPLEGVEAASSLQELIKELADETPVCFAPDIAYAHYLVAQ CCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHCC DQVQIAVESLSPEAIDVVELEKGLVEKRFADWRRAGVEEAKKLVSGIAHLEGLDQELDRV CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC GADTRFELLQEIASQHALSAIYVASPPNFSEITGIAATEGASVLWSADTQSVFLFLPQGA CCCHHHHHHHHHHHHHCEEEEEEECCCCHHHHCCEEECCCCEEEEECCCCEEEEEECCCC PAPEGSEAVGSFGSVSEAVALLIGEDKAVGVEEEFIGTALALSLTEGEIIPIQTELGHWR CCCCCHHHHCCCCCHHHHHEEEECCCCCCCCHHHHHCEEEEEEECCCCEEEEECCCCCCC DVRDSEDLPFQVIASRTSVTIMENTLEWTNNRLERGEEFTELDIYAHYLEELEDYALQFT CCCCCCCCCCEEEECCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCEEEEE FDVEPYFTNLHSSNRMLFPGPPVDFPINAETRCIQLDAGIAVKKDGVVLGTSDMARSLPR EECCHHHHCCCCCCEEECCCCCCCCCCCCCCEEEEECCCEEEECCCEEEECHHHHHHCCC TAAGQEAYEYFFKVVREGIIGQLRPGVICADVHEATLDYLSPQLPRMIDIGMLGADTDFN CCCCHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCEEEEEEECCCCCHH TIYRKRNVGHLMGKQESFANELRPGYKHILHHGSYGAAEIPWRYNGVAIGTEDLWYIGAD HHHHHCCCHHHCCCHHHHHHHHCHHHHHHHHCCCCCCEECCEEECCEEECCCCEEEECCC KTYILSQR CEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA