Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145294563
Identifier: 145294563
GI number: 145294563
Start: 575637
End: 576674
Strand: Direct
Name: 145294563
Synonym: cgR_0514
Alternate gene names: NA
Gene position: 575637-576674 (Clockwise)
Preceding gene: 145294562
Following gene: 145294564
Centisome position: 17.37
GC content: 51.64
Gene sequence:
>1038_bases ATGAACATGAAAAAGGTGGCCGCGATTACTGCGGCACTTGCACTCACAATTCCTTTGGTTAGTTCCTGTTCTTCAAACTC CACTGGAGATTCGATCGACGTCATGATGGATGTGGGTTACCTGCCTAAGCATGCGCCATTCTTTGCAGCGGTAGCGGAAG GTTTCTTCGATGAAGAAGGACTGGATGTGTCGCTCATGCCGGGTTCGGGTTCCAACAATACGGTGACCTCGGTGGAGACA GGCCGAGTGTTTGCTGGTTTCGCTGACTTTGGTGTCACTGTGATGAACCAGGGTAGGGGAGCGCAGGTTCGTCAGGTGAA TCTTTTGCAGGCTCGTTCGTCGTATGCGGCTGTTGCTGATAAAGCTAGTGGCATTGAGAGCTGGGACGATCTCAAAGGAA AGACTGTCGCAACGGAAGGTGCTGGAGCCATGGTTTCGATGTGGCCCTATGCGCTGAATCAGTTGGGATATTCAGAAGGG GATATCAATGTTGTACACGCTTCGAGTGAATCGAAGATCCCAGGATTGTTGGCTCATCAGTGGGATGCCAATTTGGCTCT TGCTGTTTCGGATGCTCCGGCATTAGCAGCGTTGGGCCTTGAGCCTGTGGTTCTCAACTGGGCGGATATCGGAATTTCGC TGTATGGAAACGGCATGGTGGTGTCCAATGAGACTATCGAAAATGAACCGGAGAAGGTGGAACGCTTTAATCGCGCTCTG CAGAAGGGATTCCTCTGGGCGTGTGAAAACCCCGAGCAGACCTATAAGGATTTCAACGCTGAGGTCCAGGGATATGAGGA ATCAACCATTCTTCTTGCCTTGGAGGAACAGTGCGCACTGAATTGGCAGAGCGATACCACGAAGGATCCTTTCGGCACCA TGACCGATGAAGGTGTGCAGGAAATGATCGATGTCGCGCAGGAGTATCTCGGAATGGATCCTTCGGTGACGATCACTCCA GATCAGGTGTATACCAACGAGTTCATCACCCCCATCACACAAGGCACTGTCATTGCAGCGCCATCTCAGGAGAAGTAG
Upstream 100 bases:
>100_bases TCTATGCAGTTGATCTTGCTGCTAAGCGCCTTGTGCCGTGGAAAACCTACGCGAAATAGTCCACGAGCCTTTCAAAAAAC AAGAAAAACAAGGAAAAGCA
Downstream 100 bases:
>100_bases GGAAATCATGTCTAATACAAGTGCAATTTCAGTAAAGAATGTTGGAGTTACGTTCCATTCCCGTGATGGTGCGGAAAATA GAGTCCTTAAAGGGGTGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NMT1/THI5-Like Domain-Containing Protein; Membrane Lipoprotein Lipid Attachment Site; Twin-Arginine Translocation Pathway Signal; Diguanylate Cyclase; ABC Transporter Periplasmic Components; NMT1/THI5-Like Family; Sulfonate/Nitrate Transport System; NMT1/THI5 Like Domain-Containing Protein; Tat Pathway Signal Sequence Domain-Containing Protein; Signal Peptide; NMT1/THI5 Like Family; Tat Pathway Signal Sequence Domain Protein; ABC-Type Transporter Periplasmic Component; Secreted Protein; Lipoprotein; Exported Protein
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MNMKKVAAITAALALTIPLVSSCSSNSTGDSIDVMMDVGYLPKHAPFFAAVAEGFFDEEGLDVSLMPGSGSNNTVTSVET GRVFAGFADFGVTVMNQGRGAQVRQVNLLQARSSYAAVADKASGIESWDDLKGKTVATEGAGAMVSMWPYALNQLGYSEG DINVVHASSESKIPGLLAHQWDANLALAVSDAPALAALGLEPVVLNWADIGISLYGNGMVVSNETIENEPEKVERFNRAL QKGFLWACENPEQTYKDFNAEVQGYEESTILLALEEQCALNWQSDTTKDPFGTMTDEGVQEMIDVAQEYLGMDPSVTITP DQVYTNEFITPITQGTVIAAPSQEK
Sequences:
>Translated_345_residues MNMKKVAAITAALALTIPLVSSCSSNSTGDSIDVMMDVGYLPKHAPFFAAVAEGFFDEEGLDVSLMPGSGSNNTVTSVET GRVFAGFADFGVTVMNQGRGAQVRQVNLLQARSSYAAVADKASGIESWDDLKGKTVATEGAGAMVSMWPYALNQLGYSEG DINVVHASSESKIPGLLAHQWDANLALAVSDAPALAALGLEPVVLNWADIGISLYGNGMVVSNETIENEPEKVERFNRAL QKGFLWACENPEQTYKDFNAEVQGYEESTILLALEEQCALNWQSDTTKDPFGTMTDEGVQEMIDVAQEYLGMDPSVTITP DQVYTNEFITPITQGTVIAAPSQEK >Mature_345_residues MNMKKVAAITAALALTIPLVSSCSSNSTGDSIDVMMDVGYLPKHAPFFAAVAEGFFDEEGLDVSLMPGSGSNNTVTSVET GRVFAGFADFGVTVMNQGRGAQVRQVNLLQARSSYAAVADKASGIESWDDLKGKTVATEGAGAMVSMWPYALNQLGYSEG DINVVHASSESKIPGLLAHQWDANLALAVSDAPALAALGLEPVVLNWADIGISLYGNGMVVSNETIENEPEKVERFNRAL QKGFLWACENPEQTYKDFNAEVQGYEESTILLALEEQCALNWQSDTTKDPFGTMTDEGVQEMIDVAQEYLGMDPSVTITP DQVYTNEFITPITQGTVIAAPSQEK
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36945; Mature: 36945
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMKKVAAITAALALTIPLVSSCSSNSTGDSIDVMMDVGYLPKHAPFFAAVAEGFFDEEG CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCC LDVSLMPGSGSNNTVTSVETGRVFAGFADFGVTVMNQGRGAQVRQVNLLQARSSYAAVAD CEEEEECCCCCCCEEEEEECCCEEEEHHHCCEEEEECCCCCEEEEEHHHHHHHHHHHHHH KASGIESWDDLKGKTVATEGAGAMVSMWPYALNQLGYSEGDINVVHASSESKIPGLLAHQ HHCCCCCHHHCCCCEEEECCCCCEEHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEC WDANLALAVSDAPALAALGLEPVVLNWADIGISLYGNGMVVSNETIENEPEKVERFNRAL CCCCEEEEECCCCCHHHCCCCEEEEEEECCCEEEECCCEEEECCCCCCCHHHHHHHHHHH QKGFLWACENPEQTYKDFNAEVQGYEESTILLALEEQCALNWQSDTTKDPFGTMTDEGVQ HHCEEEEECCHHHHHHHCCCEECCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCCHHHHH EMIDVAQEYLGMDPSVTITPDQVYTNEFITPITQGTVIAAPSQEK HHHHHHHHHHCCCCCEEECCCHHCCCCCCCCCCCCEEEECCCCCC >Mature Secondary Structure MNMKKVAAITAALALTIPLVSSCSSNSTGDSIDVMMDVGYLPKHAPFFAAVAEGFFDEEG CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCC LDVSLMPGSGSNNTVTSVETGRVFAGFADFGVTVMNQGRGAQVRQVNLLQARSSYAAVAD CEEEEECCCCCCCEEEEEECCCEEEEHHHCCEEEEECCCCCEEEEEHHHHHHHHHHHHHH KASGIESWDDLKGKTVATEGAGAMVSMWPYALNQLGYSEGDINVVHASSESKIPGLLAHQ HHCCCCCHHHCCCCEEEECCCCCEEHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEC WDANLALAVSDAPALAALGLEPVVLNWADIGISLYGNGMVVSNETIENEPEKVERFNRAL CCCCEEEEECCCCCHHHCCCCEEEEEEECCCEEEECCCEEEECCCCCCCHHHHHHHHHHH QKGFLWACENPEQTYKDFNAEVQGYEESTILLALEEQCALNWQSDTTKDPFGTMTDEGVQ HHCEEEEECCHHHHHHHCCCEECCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCCHHHHH EMIDVAQEYLGMDPSVTITPDQVYTNEFITPITQGTVIAAPSQEK HHHHHHHHHHCCCCCEEECCCHHCCCCCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA