Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145294511
Identifier: 145294511
GI number: 145294511
Start: 521663
End: 522535
Strand: Direct
Name: 145294511
Synonym: cgR_0466
Alternate gene names: NA
Gene position: 521663-522535 (Clockwise)
Preceding gene: 145294510
Following gene: 145294515
Centisome position: 15.74
GC content: 51.2
Gene sequence:
>873_bases ATGACACGTCTTTCTAGCGCCTTGTTAGCAGCCTCTGTCGCGGGGGCTGCTTTGGCCACTCCAGCGACCACTGCACATGC AGCAGAATCTGTTTGTACATTCACCGGCGATGTTGGGTGGAATGTGCGTGATTCTTTCAACAGTTATCTTTTGGGAAACA TCGCAAATGGTAGCGCTTATAAACATAAGGGTGGGTTGGACGTTCGTGATGGTGTCCAGACCGATGGTAACGGCAGAACT CCAGCACTGACCTGGCCTGTTGATTCGGTGACGTCTTCGAAGATTTCCACTTCCGGTGGCGCGCACTGGACCGGACACAA CCTGTACACCGGTGATGACCTCGCGGAAGTCCCTAACAATTTCACGTTAGATCTTGATTTTTCCAACATCACTATGGAGC TGAATGGTTCCACTGGTCGGTTGTTGGTGGATTACACATCTAGGGAATACATCGATACCCACACGTTGGGTGAGTTCCAA TCTGGTGAACAGGCTGAGCTTGCCACGATTACTTTTGCCCAGGCTCCCGACCTTTCCTCTAATTCAGTCAACGTCACTGG AGATGTGGCATTGACCGCTGATGGTGTGGAAGTCTTCGGAGGTTTCTACACAGCAGGGGAGGAGTTGGCTCCAATCACAC TGAATCTCACTGCAGATGAGGGATGTGGATCGACACCAGAACCAGAGGACACGGAGGATCCAGAAACCCCTTCTACATCG TCCTCAGACTTCTCCTTAGGATCGTCTCCTGATGTCAGCAGCAGTTCCTTCGGGGATACGGTTACGCAGGTGTTGTCAAT TGGTTCGATGGTGGGCATGGCTGGTTTGTTGTTCACGATCGTGAATTACTTCATCCAAAGCTTCGCCCCATAA
Upstream 100 bases:
>100_bases TATCCTCGGAATCTTGGGCACCCTCGCAGCGCTTGGTGGCGTTGGCGCACTTGTGTACAACTTCCTCGTGGCTAGTGGAT TCCTCGCAGCATTCAAGTAA
Downstream 100 bases:
>100_bases ACCCATAAACCCATAAACCAGAAAAAAATCGCCGTCACCGTAGAGGTGGCAGCGATTTTCTTCGTTTAGGACTAAAAGTC ACAGACACGAAAGCGCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTRLSSALLAASVAGAALATPATTAHAAESVCTFTGDVGWNVRDSFNSYLLGNIANGSAYKHKGGLDVRDGVQTDGNGRT PALTWPVDSVTSSKISTSGGAHWTGHNLYTGDDLAEVPNNFTLDLDFSNITMELNGSTGRLLVDYTSREYIDTHTLGEFQ SGEQAELATITFAQAPDLSSNSVNVTGDVALTADGVEVFGGFYTAGEELAPITLNLTADEGCGSTPEPEDTEDPETPSTS SSDFSLGSSPDVSSSSFGDTVTQVLSIGSMVGMAGLLFTIVNYFIQSFAP
Sequences:
>Translated_290_residues MTRLSSALLAASVAGAALATPATTAHAAESVCTFTGDVGWNVRDSFNSYLLGNIANGSAYKHKGGLDVRDGVQTDGNGRT PALTWPVDSVTSSKISTSGGAHWTGHNLYTGDDLAEVPNNFTLDLDFSNITMELNGSTGRLLVDYTSREYIDTHTLGEFQ SGEQAELATITFAQAPDLSSNSVNVTGDVALTADGVEVFGGFYTAGEELAPITLNLTADEGCGSTPEPEDTEDPETPSTS SSDFSLGSSPDVSSSSFGDTVTQVLSIGSMVGMAGLLFTIVNYFIQSFAP >Mature_289_residues TRLSSALLAASVAGAALATPATTAHAAESVCTFTGDVGWNVRDSFNSYLLGNIANGSAYKHKGGLDVRDGVQTDGNGRTP ALTWPVDSVTSSKISTSGGAHWTGHNLYTGDDLAEVPNNFTLDLDFSNITMELNGSTGRLLVDYTSREYIDTHTLGEFQS GEQAELATITFAQAPDLSSNSVNVTGDVALTADGVEVFGGFYTAGEELAPITLNLTADEGCGSTPEPEDTEDPETPSTSS SDFSLGSSPDVSSSSFGDTVTQVLSIGSMVGMAGLLFTIVNYFIQSFAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30127; Mature: 29996
Theoretical pI: Translated: 3.80; Mature: 3.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLSSALLAASVAGAALATPATTAHAAESVCTFTGDVGWNVRDSFNSYLLGNIANGSAY CCCHHHHHHHHHHHCHHHCCCCHHHHHHHHEEEEECCCCCCHHHCCCCEEEEEECCCCCE KHKGGLDVRDGVQTDGNGRTPALTWPVDSVTSSKISTSGGAHWTGHNLYTGDDLAEVPNN ECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCC FTLDLDFSNITMELNGSTGRLLVDYTSREYIDTHTLGEFQSGEQAELATITFAQAPDLSS EEEEEEECEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC NSVNVTGDVALTADGVEVFGGFYTAGEELAPITLNLTADEGCGSTPEPEDTEDPETPSTS CCEEEEEEEEEEECCHHHHCCEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCC SSDFSLGSSPDVSSSSFGDTVTQVLSIGSMVGMAGLLFTIVNYFIQSFAP CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TRLSSALLAASVAGAALATPATTAHAAESVCTFTGDVGWNVRDSFNSYLLGNIANGSAY CCHHHHHHHHHHHCHHHCCCCHHHHHHHHEEEEECCCCCCHHHCCCCEEEEEECCCCCE KHKGGLDVRDGVQTDGNGRTPALTWPVDSVTSSKISTSGGAHWTGHNLYTGDDLAEVPNN ECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCC FTLDLDFSNITMELNGSTGRLLVDYTSREYIDTHTLGEFQSGEQAELATITFAQAPDLSS EEEEEEECEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC NSVNVTGDVALTADGVEVFGGFYTAGEELAPITLNLTADEGCGSTPEPEDTEDPETPSTS CCEEEEEEEEEEECCHHHHCCEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCC SSDFSLGSSPDVSSSSFGDTVTQVLSIGSMVGMAGLLFTIVNYFIQSFAP CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA