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The map label for this gene is 145294498

Identifier: 145294498

GI number: 145294498

Start: 505767

End: 506420

Strand: Direct

Name: 145294498

Synonym: cgR_0453

Alternate gene names: NA

Gene position: 505767-506420 (Clockwise)

Preceding gene: 145294497

Following gene: 145294499

Centisome position: 15.26

GC content: 49.08

Gene sequence:

>654_bases
GTGGATATTGAAGAGCAGCCCTCGTTAAGAGAAACCAAGCGCCAAAAGACCCTGGAAGCGATCGAAGACAACGCAACCAG
ACTCATCTTGGAGCGCGGCTTCGACAATGTCACGGTCGAAGATATTTGTGCAGAAGCAGGAATATCCAAGCGCACATTCT
TTAACTACGTGGAGTCCAAAGAGTCTGTGGCCATCGGGCACACAGCCAAGCTCCCAACGGATGAAGAACGTGAAGGATTC
TTGGCTACGCGTCATGAGAATATTATCGATACTGTATTTGACCTGGTTATAAACCTCTTTGGCAACCACGACAACTCCAA
GTCTGGAGTTGCAGGCGACATTATGCGTCGACGCAAAGAGATCCGGGTGAAGCATCCAGAACTGGCAGTGCAACATTTCG
CCAGGTTCCACCAAGCACGCGAAGGGCTAGAACACCTAATTGTTGAGTACTTCGAAAAATGGCCAGGCTCCCAACATCTA
GATGAGCCTGCAGATCGAGAAGCAATCGCCATAGTTGGCCTGCTGATCTCGGTCATGCTTCAAGGTTCTCGTGAATGGCA
CGACATGCCACAAGGCACGCAAGCTGATTTCCAAGCCTGCTGCCGCAAAGCAATTAAAAATACTTTTCTTCTTAGAGGTG
GATTTTCAGAATGA

Upstream 100 bases:

>100_bases
GGTGTTGCTGTGTGAACTAACTCATTGATGTCACCTAACGCCTCTAAGTTCACTCGGTGCAATATTGCACCGAGTGCAAG
TTTGCACTAGGTTTACTTAG

Downstream 100 bases:

>100_bases
CATCACAGGTCAAACCGGAGGACGAACGCCCGGTAACTACAATTTCAAAAAGTGGTGCACCTTCGGCCCACACCTCAGCA
CCATATGGCGAGGCAGCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; HTH-Type Transcriptional Regulator

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MDIEEQPSLRETKRQKTLEAIEDNATRLILERGFDNVTVEDICAEAGISKRTFFNYVESKESVAIGHTAKLPTDEEREGF
LATRHENIIDTVFDLVINLFGNHDNSKSGVAGDIMRRRKEIRVKHPELAVQHFARFHQAREGLEHLIVEYFEKWPGSQHL
DEPADREAIAIVGLLISVMLQGSREWHDMPQGTQADFQACCRKAIKNTFLLRGGFSE

Sequences:

>Translated_217_residues
MDIEEQPSLRETKRQKTLEAIEDNATRLILERGFDNVTVEDICAEAGISKRTFFNYVESKESVAIGHTAKLPTDEEREGF
LATRHENIIDTVFDLVINLFGNHDNSKSGVAGDIMRRRKEIRVKHPELAVQHFARFHQAREGLEHLIVEYFEKWPGSQHL
DEPADREAIAIVGLLISVMLQGSREWHDMPQGTQADFQACCRKAIKNTFLLRGGFSE
>Mature_217_residues
MDIEEQPSLRETKRQKTLEAIEDNATRLILERGFDNVTVEDICAEAGISKRTFFNYVESKESVAIGHTAKLPTDEEREGF
LATRHENIIDTVFDLVINLFGNHDNSKSGVAGDIMRRRKEIRVKHPELAVQHFARFHQAREGLEHLIVEYFEKWPGSQHL
DEPADREAIAIVGLLISVMLQGSREWHDMPQGTQADFQACCRKAIKNTFLLRGGFSE

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24774; Mature: 24774

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIEEQPSLRETKRQKTLEAIEDNATRLILERGFDNVTVEDICAEAGISKRTFFNYVESK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHCC
ESVAIGHTAKLPTDEEREGFLATRHENIIDTVFDLVINLFGNHDNSKSGVAGDIMRRRKE
CCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
IRVKHPELAVQHFARFHQAREGLEHLIVEYFEKWPGSQHLDEPADREAIAIVGLLISVML
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
QGSREWHDMPQGTQADFQACCRKAIKNTFLLRGGFSE
HCCHHHHCCCCCCHHHHHHHHHHHHHHHEECCCCCCC
>Mature Secondary Structure
MDIEEQPSLRETKRQKTLEAIEDNATRLILERGFDNVTVEDICAEAGISKRTFFNYVESK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHCC
ESVAIGHTAKLPTDEEREGFLATRHENIIDTVFDLVINLFGNHDNSKSGVAGDIMRRRKE
CCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
IRVKHPELAVQHFARFHQAREGLEHLIVEYFEKWPGSQHLDEPADREAIAIVGLLISVML
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
QGSREWHDMPQGTQADFQACCRKAIKNTFLLRGGFSE
HCCHHHHCCCCCCHHHHHHHHHHHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA